FFCP PHASE1:Hg19::chr3:112359375..112359386,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=57bp_to_AY726593_5end | |association_with_transcript=57bp_to_AY726593_5end | ||
|cluster_id=chr3:112359375..112359386,- | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_27_at_CCDC80_5end | |description=CAGE_peak_27_at_CCDC80_5end | ||
|id=chr3:112359375..112359386,- | |id=chr3:112359375..112359386,- | ||
|ontology_enrichment_celltype=CL:0000055!1.23e-28!180;CL:0000680!1.76e-17!57;CL:0000056!1.76e-17!57;CL:0000355!1.76e-17!57;CL:0000187!4.94e-16!54;CL:0000057!1.63e-15!75;CL:0000183!1.91e-13!59;CL:0000393!5.48e-13!60;CL:0000211!5.48e-13!60;CL:0000192!7.40e-13!42;CL:0000514!7.40e-13!42;CL:0002494!2.23e-10!16;CL:0000359!3.68e-10!32;CL:0002334!1.77e-08!12;CL:0002620!1.85e-08!23;CL:0000048!1.36e-07!430;CL:0000723!5.41e-07!436 | |ontology_enrichment_celltype=CL:0000055!1.23e-28!180;CL:0000680!1.76e-17!57;CL:0000056!1.76e-17!57;CL:0000355!1.76e-17!57;CL:0000187!4.94e-16!54;CL:0000057!1.63e-15!75;CL:0000183!1.91e-13!59;CL:0000393!5.48e-13!60;CL:0000211!5.48e-13!60;CL:0000192!7.40e-13!42;CL:0000514!7.40e-13!42;CL:0002494!2.23e-10!16;CL:0000359!3.68e-10!32;CL:0002334!1.77e-08!12;CL:0002620!1.85e-08!23;CL:0000048!1.36e-07!430;CL:0000723!5.41e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.73e-16;23!CL:0002494;4.01e-14;16!CL:0002334;8.04e-14;12!CL:1000306;1.12e-11;4!CL:0002547;1.12e-11;4!CL:0000057;1.59e-10;73!CL:0002579;1.14e-09;3!CL:0002580;5.32e-09;3!CL:0002548;3.14e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.97e-29,76;CL:0002620,8.26e-16,23;CL:0002494,3.99e-14,16;CL:0002334,7.78e-14,12;CL:1000306,1.06e-11,4;CL:0002547,1.06e-11,4;CL:0000048,1.64e-10,427;CL:0000723,3.73e-10,433;CL:0000034,1.07e-09,441;CL:0002579,1.19e-09,3;CL:0002580,4.44e-09,3;CL:0000134,1.29e-07,354;CL:0002548,2.98e-07,6;CL:0002320,3.09e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.91e-13;5!DOID:450;6.91e-13;5!DOID:66;6.91e-13;5!DOID:423;6.91e-13;5!DOID:0080000;6.91e-13;5!DOID:11722;6.91e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.41e-13,5;DOID:450,5.41e-13,5;DOID:66,5.41e-13,5;DOID:423,5.41e-13,5;DOID:0080000,5.41e-13,5;DOID:11722,5.41e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.67e-15!61;UBERON:0002036!2.67e-15!61;UBERON:0003082!2.67e-15!61;UBERON:0002385!4.66e-15!63;UBERON:0001015!4.66e-15!63;UBERON:0000383!4.66e-15!63;UBERON:0004290!1.40e-13!70;UBERON:0000914!5.23e-13!83;UBERON:0002329!5.23e-13!83;UBERON:0003077!5.23e-13!83;UBERON:0003059!5.23e-13!83;UBERON:0007282!5.23e-13!83;UBERON:0009618!5.23e-13!83;UBERON:0007285!5.23e-13!83;UBERON:0000948!3.20e-12!24;UBERON:0005498!3.20e-12!24;UBERON:0004140!3.20e-12!24;UBERON:0009881!3.20e-12!24;UBERON:0004141!3.20e-12!24;UBERON:0003084!3.20e-12!24;UBERON:0007005!3.20e-12!24;UBERON:0004139!3.20e-12!24;UBERON:0004291!3.20e-12!24;UBERON:0004872!4.05e-12!84;UBERON:0000486!1.67e-11!82;UBERON:0007100!5.15e-10!27;UBERON:0005256!5.48e-08!143;UBERON:0001637!1.11e-07!42;UBERON:0003509!1.11e-07!42;UBERON:0004572!1.11e-07!42;UBERON:0000490!4.93e-07!138;UBERON:0001981!5.17e-07!60;UBERON:0007500!5.17e-07!60;UBERON:0004537!5.17e-07!60;UBERON:0006965!5.17e-07!60;UBERON:0000475!5.26e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.38e-12;6!UBERON:0002358;2.38e-12;6!UBERON:0003684;2.38e-12;6!UBERON:0001178;2.38e-12;6!UBERON:0000948;5.68e-12;22!UBERON:0004797;1.12e-11;4!UBERON:0000415;1.12e-11;4!UBERON:0007240;1.12e-11;4!UBERON:0005742;1.12e-11;4!UBERON:0005734;1.12e-11;4!UBERON:0004664;1.12e-11;4!UBERON:0004663;1.12e-11;4!UBERON:0004457;5.54e-11;9!UBERON:0000042;5.54e-11;9!UBERON:0007100;3.05e-10;25!UBERON:0002097;2.06e-08;41!UBERON:0002199;6.03e-08;46!UBERON:0002416;6.03e-08;46!UBERON:0005406;7.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,5.09e-13,24;UBERON:0005498,5.09e-13,24;UBERON:0004140,5.09e-13,24;UBERON:0009881,5.09e-13,24;UBERON:0004141,5.09e-13,24;UBERON:0003084,5.09e-13,24;UBERON:0007005,5.09e-13,24;UBERON:0004139,5.09e-13,24;UBERON:0004291,5.09e-13,24;UBERON:0003688,2.63e-12,6;UBERON:0002358,2.63e-12,6;UBERON:0003684,2.63e-12,6;UBERON:0001178,2.63e-12,6;UBERON:0000415,1.06e-11,4;UBERON:0007240,1.06e-11,4;UBERON:0005742,1.06e-11,4;UBERON:0005734,1.06e-11,4;UBERON:0004664,1.06e-11,4;UBERON:0004663,1.06e-11,4;UBERON:0007100,2.91e-11,27;UBERON:0004872,1.32e-10,83;UBERON:0002097,2.36e-10,41;UBERON:0002199,3.72e-10,46;UBERON:0002416,3.72e-10,46;UBERON:0004797,4.61e-10,7;UBERON:0004457,5.03e-08,12;UBERON:0000042,5.03e-08,12;UBERON:0002384,2.83e-07,371;UBERON:0005406,6.67e-07,2 | |||
|phase1_expression=1.99846217197612,2.99740733447376,8.59821864985424,0,4.02264984984559,4.36169262050184,0,0.631719873426831,0.783556884599516,0,0,1.31064823278103,0.791300934685361,0.123766352960047,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0.738726348460727,0,0.626909442956176,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,2.9408389224012,0.361439152384566,2.50668955317945,1.59331170856906,0.795285947051099,0.973269740605272,0,0,0.527008714158756,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,5.31848148991235,7.28250494472703,11.4734648299525,1.41867352879343,3.36406560085384,2.1349799145941,1.97334038733728,2.17847724779836,0.404132016209064,0,0.454072282934794,0.576175924479999,0,0,0,0.149448680551801,0,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0.150238058906597,0.680593098960126,1.79389635688862,2.77624605464138,3.17897851739343,2.70081986475962,1.23663035086127,0.772921620136887,1.30281799432113,3.54430297706659,1.16924406193438,2.77677151668526,1.65689817556139,0.646584227275248,4.26011511019937,1.30977727695932,1.18692414617341,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29149563659404,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.560655421726804,0.43596006883328,0.36669142910475,2.45616259939778,0,0,0.26593811658487,0,0,0,0.532844358032199,0.57191197463259,0.542621605391443,0.823240336780769,0.325736184293735,0.710783897485092,0,0.301439377059586,0,0.099972991182057,0,0,0,0.718874566474748,0,0,3.76431397335706,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.813795071099207,0.623912584592421,0.713715955188647,0.788512075169673,1.05427273493442,0.902838299183157,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0,0,0,0,0,0.303127571446259,6.65741758041988,3.32629322662648,3.72161711728165,3.52962538562544,2.80660094433074,12.0450800300359,4.09365799253363,9.97294311090366,4.45254199334973,0.154209693802656,1.24293207719189,0.492762936082855,0,0.232420756919918,0,0,0,0.68888668898764,0.364182336013434,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0.308097234229289,0.460511024178389,0,0.429680979473094,0.290033387828457,0.0852266274161009,0.445160178233687,0.165284915360978,0,0,0,0,14.4813679542094,0,0.924100740528266,1.06461206063404,0.869932992075073,1.29726953372744,0,0.372158369359667,0.316379424718726,0.571890581771475,0,0.855877976067841,0.318203247925937,0,0.719489830333259,0.823611089208164,0.117812402345686,1.01091240786658,1.58510321173008,0.421258456238981,0.975267478179181,0.243713489631284,1.05650146756755,0.545999645631943,1.69686518344455,3.39024349860728,0,0.66343897524122,0.876901770507525,0.578775534266688,0,0.811641507850816,0.30982349809975,0.281695602532241,0.143411352204052,0.982490410131212,1.426684205925,0.354761064070598,1.47775344708365,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0.779160935160341,0,0,0.597743964753209,0,0,0,0,1.86623752597084,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.139423744278603,0.692552326534174,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0,0,0,0,0.394584402849391,0,0,0.695052375913368,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.174118413160805,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.426905989478705,0.39961921916426,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,4.18923601908381,0.687481272035051,0.717873024576814,0,0,0,0.201550417460179,3.60299883542404,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,1.08599920350743,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.597019211547496,0.701139929541673,1.66441758450784,0.757612021100357,2.0125432140206,0.889811221596536,1.37304041038154,2.41969478021182,0.15543720058278,0.295710299979268,0.318593534327405,0,0,2.07353103920428,2.39257543102195,1.04349012362347,0.601030435988874,3.80805212168795,0.406870733204662,0,0.107410557042488,0.464033759878494,0.796191777397232,0,0,0.336749488765919,0,0,0,0.521988583930423,0,0.231522474323834,0,0.71635536432595,0,1.09642024789354,0.353378291891762,0.964570191354574,0.1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| ||
|short_description=p27@CCDC80 | |short_description=p27@CCDC80 | ||
}} | }} |
Latest revision as of 14:29, 19 September 2015
Short description: | p27@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 57bp_to_AY726593_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.97e-29 | 76 |
skin fibroblast | 8.26e-16 | 23 |
cardiocyte | 3.99e-14 | 16 |
preadipocyte | 7.78e-14 | 12 |
fibroblast of tunica adventitia of artery | 1.06e-11 | 4 |
fibroblast of the aortic adventitia | 1.06e-11 | 4 |
multi fate stem cell | 1.64e-10 | 427 |
somatic stem cell | 3.73e-10 | 433 |
stem cell | 1.07e-09 | 441 |
omentum preadipocyte | 1.19e-09 | 3 |
preadipocyte of the breast | 4.44e-09 | 3 |
mesenchymal cell | 1.29e-07 | 354 |
cardiac fibroblast | 2.98e-07 | 6 |
connective tissue cell | 3.09e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
heart | 5.09e-13 | 24 |
primitive heart tube | 5.09e-13 | 24 |
primary heart field | 5.09e-13 | 24 |
anterior lateral plate mesoderm | 5.09e-13 | 24 |
heart tube | 5.09e-13 | 24 |
heart primordium | 5.09e-13 | 24 |
cardiac mesoderm | 5.09e-13 | 24 |
cardiogenic plate | 5.09e-13 | 24 |
heart rudiment | 5.09e-13 | 24 |
omentum | 2.63e-12 | 6 |
peritoneum | 2.63e-12 | 6 |
abdominal cavity | 2.63e-12 | 6 |
visceral peritoneum | 2.63e-12 | 6 |
artery wall | 1.06e-11 | 4 |
tunica adventitia of artery | 1.06e-11 | 4 |
adventitia | 1.06e-11 | 4 |
tunica adventitia of blood vessel | 1.06e-11 | 4 |
aorta tunica adventitia | 1.06e-11 | 4 |
aorta wall | 1.06e-11 | 4 |
primary circulatory organ | 2.91e-11 | 27 |
splanchnic layer of lateral plate mesoderm | 1.32e-10 | 83 |
skin of body | 2.36e-10 | 41 |
integument | 3.72e-10 | 46 |
integumental system | 3.72e-10 | 46 |
blood vessel layer | 4.61e-10 | 7 |
cavity lining | 5.03e-08 | 12 |
serous membrane | 5.03e-08 | 12 |
connective tissue | 2.83e-07 | 371 |
perirenal fat | 6.67e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.41e-13 | 5 |
myotonic disease | 5.41e-13 | 5 |
muscle tissue disease | 5.41e-13 | 5 |
myopathy | 5.41e-13 | 5 |
muscular disease | 5.41e-13 | 5 |
myotonic dystrophy | 5.41e-13 | 5 |