FFCP PHASE1:Hg19::chr3:112358632..112358646,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-121bp_to_BC023639,BC042128_5end | |association_with_transcript=-121bp_to_BC023639,BC042128_5end | ||
|cluster_id=chr3:112358632..112358646,- | |||
|coexpression_cluster_id=C333 | |coexpression_cluster_id=C333 | ||
|description=CAGE_peak_5_at_CCDC80_5end | |description=CAGE_peak_5_at_CCDC80_5end | ||
|id=chr3:112358632..112358646,- | |id=chr3:112358632..112358646,- | ||
|ontology_enrichment_celltype=CL:0000055!3.86e-33!180;CL:0000680!1.71e-20!57;CL:0000056!1.71e-20!57;CL:0000355!1.71e-20!57;CL:0000057!1.30e-19!75;CL:0000187!2.86e-19!54;CL:0000192!3.85e-17!42;CL:0000514!3.85e-17!42;CL:0000183!1.51e-16!59;CL:0000393!2.98e-15!60;CL:0000211!2.98e-15!60;CL:0000359!7.19e-13!32;CL:0002620!1.75e-10!23;CL:0000136!1.96e-10!15;CL:0000222!1.85e-09!119;CL:0002334!2.36e-09!12;CL:0000048!1.51e-07!430;CL:0002570!4.80e-07!8;CL:0000723!5.87e-07!436 | |ontology_enrichment_celltype=CL:0000055!3.86e-33!180;CL:0000680!1.71e-20!57;CL:0000056!1.71e-20!57;CL:0000355!1.71e-20!57;CL:0000057!1.30e-19!75;CL:0000187!2.86e-19!54;CL:0000192!3.85e-17!42;CL:0000514!3.85e-17!42;CL:0000183!1.51e-16!59;CL:0000393!2.98e-15!60;CL:0000211!2.98e-15!60;CL:0000359!7.19e-13!32;CL:0002620!1.75e-10!23;CL:0000136!1.96e-10!15;CL:0000222!1.85e-09!119;CL:0002334!2.36e-09!12;CL:0000048!1.51e-07!430;CL:0002570!4.80e-07!8;CL:0000723!5.87e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000192;4.98e-15;43!CL:0000359;1.44e-14;32!CL:0002334;8.13e-12;12!CL:0000136;2.60e-11;13!CL:0002620;3.26e-11;23!CL:0000187;9.22e-11;55!CL:0000393;3.47e-09;61!CL:0000211;3.47e-09;61!CL:0002570;8.62e-09;8!CL:0000057;1.30e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.42e-22,58;CL:0000056,7.42e-22,58;CL:0000355,7.42e-22,58;CL:0000192,2.01e-20,43;CL:0000514,2.01e-20,43;CL:0000187,2.70e-20,55;CL:0000057,2.51e-18,76;CL:0000393,8.32e-17,61;CL:0000211,8.32e-17,61;CL:0000359,3.42e-15,32;CL:0000048,1.47e-14,427;CL:0000723,9.56e-14,433;CL:0000136,2.96e-13,15;CL:0000034,1.04e-12,441;CL:0002334,7.83e-12,12;CL:0002620,3.25e-11,23;CL:0000222,5.11e-09,121;CL:0002570,8.53e-09,8 | |||
|ontology_enrichment_development_v019=CL:0000514;4.98e-15;43!CL:0000355;3.79e-11;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!4.83e-20!63;UBERON:0001015!4.83e-20!63;UBERON:0000383!4.83e-20!63;UBERON:0004290!1.39e-19!70;UBERON:0001134!2.47e-19!61;UBERON:0002036!2.47e-19!61;UBERON:0003082!2.47e-19!61;UBERON:0000914!1.37e-17!83;UBERON:0002329!1.37e-17!83;UBERON:0003077!1.37e-17!83;UBERON:0003059!1.37e-17!83;UBERON:0007282!1.37e-17!83;UBERON:0009618!1.37e-17!83;UBERON:0007285!1.37e-17!83;UBERON:0000486!1.28e-15!82;UBERON:0004872!5.73e-12!84;UBERON:0005256!4.39e-11!143;UBERON:0001013!1.27e-10!14;UBERON:0001637!1.55e-09!42;UBERON:0003509!1.55e-09!42;UBERON:0004572!1.55e-09!42;UBERON:0002199!5.53e-09!45;UBERON:0002416!5.53e-09!45;UBERON:0000475!7.08e-09!365;UBERON:0004573!7.21e-09!33;UBERON:0004571!7.21e-09!33;UBERON:0007100!2.26e-08!27;UBERON:0002100!3.12e-08!216;UBERON:0000948!6.89e-08!24;UBERON:0005498!6.89e-08!24;UBERON:0004140!6.89e-08!24;UBERON:0009881!6.89e-08!24;UBERON:0004141!6.89e-08!24;UBERON:0003084!6.89e-08!24;UBERON:0007005!6.89e-08!24;UBERON:0004139!6.89e-08!24;UBERON:0004291!6.89e-08!24;UBERON:0001981!9.73e-08!60;UBERON:0007500!9.73e-08!60;UBERON:0004537!9.73e-08!60;UBERON:0006965!9.73e-08!60;UBERON:0002049!1.76e-07!79;UBERON:0007798!1.76e-07!79;UBERON:0001009!2.89e-07!113;UBERON:0004923!3.48e-07!57;UBERON:0000490!4.68e-07!138;UBERON:0001135!6.50e-07!15;UBERON:0004535!7.98e-07!110 | |ontology_enrichment_uberon=UBERON:0002385!4.83e-20!63;UBERON:0001015!4.83e-20!63;UBERON:0000383!4.83e-20!63;UBERON:0004290!1.39e-19!70;UBERON:0001134!2.47e-19!61;UBERON:0002036!2.47e-19!61;UBERON:0003082!2.47e-19!61;UBERON:0000914!1.37e-17!83;UBERON:0002329!1.37e-17!83;UBERON:0003077!1.37e-17!83;UBERON:0003059!1.37e-17!83;UBERON:0007282!1.37e-17!83;UBERON:0009618!1.37e-17!83;UBERON:0007285!1.37e-17!83;UBERON:0000486!1.28e-15!82;UBERON:0004872!5.73e-12!84;UBERON:0005256!4.39e-11!143;UBERON:0001013!1.27e-10!14;UBERON:0001637!1.55e-09!42;UBERON:0003509!1.55e-09!42;UBERON:0004572!1.55e-09!42;UBERON:0002199!5.53e-09!45;UBERON:0002416!5.53e-09!45;UBERON:0000475!7.08e-09!365;UBERON:0004573!7.21e-09!33;UBERON:0004571!7.21e-09!33;UBERON:0007100!2.26e-08!27;UBERON:0002100!3.12e-08!216;UBERON:0000948!6.89e-08!24;UBERON:0005498!6.89e-08!24;UBERON:0004140!6.89e-08!24;UBERON:0009881!6.89e-08!24;UBERON:0004141!6.89e-08!24;UBERON:0003084!6.89e-08!24;UBERON:0007005!6.89e-08!24;UBERON:0004139!6.89e-08!24;UBERON:0004291!6.89e-08!24;UBERON:0001981!9.73e-08!60;UBERON:0007500!9.73e-08!60;UBERON:0004537!9.73e-08!60;UBERON:0006965!9.73e-08!60;UBERON:0002049!1.76e-07!79;UBERON:0007798!1.76e-07!79;UBERON:0001009!2.89e-07!113;UBERON:0004923!3.48e-07!57;UBERON:0000490!4.68e-07!138;UBERON:0001135!6.50e-07!15;UBERON:0004535!7.98e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.71e-13;14!UBERON:0004573;3.66e-09;33!UBERON:0004571;3.66e-09;33!UBERON:0001135;3.31e-08;15!UBERON:0002199;1.22e-07;46!UBERON:0002416;1.22e-07;46!UBERON:0004457;1.31e-07;9!UBERON:0000042;1.31e-07;9!UBERON:0001637;1.67e-07;42!UBERON:0003509;1.67e-07;42!UBERON:0004572;1.67e-07;42!UBERON:0003688;1.72e-07;6!UBERON:0002358;1.72e-07;6!UBERON:0003684;1.72e-07;6!UBERON:0001178;1.72e-07;6!UBERON:0000948;3.38e-07;22 | |||
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| ||
|short_description=p5@CCDC80 | |short_description=p5@CCDC80 | ||
}} | }} |
Latest revision as of 14:21, 19 September 2015
Short description: | p5@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | -121bp_to_BC023639, BC042128_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.42e-22 | 58 |
myoblast | 7.42e-22 | 58 |
multi-potent skeletal muscle stem cell | 7.42e-22 | 58 |
smooth muscle cell | 2.01e-20 | 43 |
smooth muscle myoblast | 2.01e-20 | 43 |
muscle cell | 2.70e-20 | 55 |
fibroblast | 2.51e-18 | 76 |
electrically responsive cell | 8.32e-17 | 61 |
electrically active cell | 8.32e-17 | 61 |
vascular associated smooth muscle cell | 3.42e-15 | 32 |
multi fate stem cell | 1.47e-14 | 427 |
somatic stem cell | 9.56e-14 | 433 |
fat cell | 2.96e-13 | 15 |
stem cell | 1.04e-12 | 441 |
preadipocyte | 7.83e-12 | 12 |
skin fibroblast | 3.25e-11 | 23 |
mesodermal cell | 5.11e-09 | 121 |
mesenchymal stem cell of adipose | 8.53e-09 | 8 |