FFCP PHASE1:Hg19::chr3:112358228..112358239,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=271bp_to_BC023639,BC042128_5end | |association_with_transcript=271bp_to_BC023639,BC042128_5end | ||
|cluster_id=chr3:112358228..112358239,- | |||
|coexpression_cluster_id=C333 | |coexpression_cluster_id=C333 | ||
|description=CAGE_peak_31_at_CCDC80_5end | |description=CAGE_peak_31_at_CCDC80_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.81e-20!180;CL:0000057!2.11e-17!75;CL:0002620!1.43e-08!23;CL:0002334!4.97e-08!12;CL:0000680!1.14e-07!57;CL:0000056!1.14e-07!57;CL:0000355!1.14e-07!57 | |ontology_enrichment_celltype=CL:0000055!1.81e-20!180;CL:0000057!2.11e-17!75;CL:0002620!1.43e-08!23;CL:0002334!4.97e-08!12;CL:0000680!1.14e-07!57;CL:0000056!1.14e-07!57;CL:0000355!1.14e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.84e-12;23!CL:1000306;1.04e-11;4!CL:0002547;1.04e-11;4!CL:0000135;1.07e-09;3!CL:0000388;1.07e-09;3!CL:0000136;2.89e-07;13 | |ontology_enrichment_celltype_v019=CL:0002620;9.84e-12;23!CL:1000306;1.04e-11;4!CL:0002547;1.04e-11;4!CL:0000135;1.07e-09;3!CL:0000388;1.07e-09;3!CL:0000136;2.89e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.27e-17,76;CL:1000306,6.05e-12,4;CL:0002547,6.05e-12,4;CL:0002620,1.25e-11,23;CL:0000135,1.11e-09,3;CL:0000388,1.11e-09,3;CL:0000136,5.11e-08,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;7.49e-09;5!DOID:450;7.49e-09;5!DOID:66;7.49e-09;5!DOID:423;7.49e-09;5!DOID:0080000;7.49e-09;5!DOID:11722;7.49e-09;5 | |ontology_enrichment_disease_v019=DOID:17;7.49e-09;5!DOID:450;7.49e-09;5!DOID:66;7.49e-09;5!DOID:423;7.49e-09;5!DOID:0080000;7.49e-09;5!DOID:11722;7.49e-09;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,8.04e-09,5;DOID:450,8.04e-09,5;DOID:66,8.04e-09,5;DOID:423,8.04e-09,5;DOID:0080000,8.04e-09,5;DOID:11722,8.04e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0002385!3.97e-07!63;UBERON:0001015!3.97e-07!63;UBERON:0000383!3.97e-07!63;UBERON:0002199!4.11e-07!45;UBERON:0002416!4.11e-07!45;UBERON:0000914!4.95e-07!83;UBERON:0002329!4.95e-07!83;UBERON:0003077!4.95e-07!83;UBERON:0003059!4.95e-07!83;UBERON:0007282!4.95e-07!83;UBERON:0009618!4.95e-07!83;UBERON:0007285!4.95e-07!83 | |ontology_enrichment_uberon=UBERON:0002385!3.97e-07!63;UBERON:0001015!3.97e-07!63;UBERON:0000383!3.97e-07!63;UBERON:0002199!4.11e-07!45;UBERON:0002416!4.11e-07!45;UBERON:0000914!4.95e-07!83;UBERON:0002329!4.95e-07!83;UBERON:0003077!4.95e-07!83;UBERON:0003059!4.95e-07!83;UBERON:0007282!4.95e-07!83;UBERON:0009618!4.95e-07!83;UBERON:0007285!4.95e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.04e-11;4!UBERON:0000415;1.04e-11;4!UBERON:0007240;1.04e-11;4!UBERON:0005742;1.04e-11;4!UBERON:0005734;1.04e-11;4!UBERON:0004664;1.04e-11;4!UBERON:0004663;1.04e-11;4!UBERON:0004457;4.25e-11;9!UBERON:0000042;4.25e-11;9!UBERON:0007846;1.07e-09;3!UBERON:0000043;1.07e-09;3!UBERON:0007845;1.07e-09;3!UBERON:0003688;4.02e-08;6!UBERON:0002358;4.02e-08;6!UBERON:0003684;4.02e-08;6!UBERON:0001178;4.02e-08;6!UBERON:0002097;5.23e-07;41!UBERON:0002199;6.49e-07;46!UBERON:0002416;6.49e-07;46 | |ontology_enrichment_uberon_v019=UBERON:0004797;1.04e-11;4!UBERON:0000415;1.04e-11;4!UBERON:0007240;1.04e-11;4!UBERON:0005742;1.04e-11;4!UBERON:0005734;1.04e-11;4!UBERON:0004664;1.04e-11;4!UBERON:0004663;1.04e-11;4!UBERON:0004457;4.25e-11;9!UBERON:0000042;4.25e-11;9!UBERON:0007846;1.07e-09;3!UBERON:0000043;1.07e-09;3!UBERON:0007845;1.07e-09;3!UBERON:0003688;4.02e-08;6!UBERON:0002358;4.02e-08;6!UBERON:0003684;4.02e-08;6!UBERON:0001178;4.02e-08;6!UBERON:0002097;5.23e-07;41!UBERON:0002199;6.49e-07;46!UBERON:0002416;6.49e-07;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,6.05e-12,4;UBERON:0007240,6.05e-12,4;UBERON:0005742,6.05e-12,4;UBERON:0005734,6.05e-12,4;UBERON:0004664,6.05e-12,4;UBERON:0004663,6.05e-12,4;UBERON:0002199,1.38e-10,46;UBERON:0002416,1.38e-10,46;UBERON:0004797,3.71e-10,7;UBERON:0007846,1.11e-09,3;UBERON:0000043,1.11e-09,3;UBERON:0007845,1.11e-09,3;UBERON:0002097,2.36e-09,41;UBERON:0004457,2.92e-08,12;UBERON:0000042,2.92e-08,12;UBERON:0003688,3.51e-08,6;UBERON:0002358,3.51e-08,6;UBERON:0003684,3.51e-08,6;UBERON:0001178,3.51e-08,6 | |||
|phase1_expression=1.45342703416445,3.63970890614671,2.67813367782345,0,4.46961094427288,3.48935409640147,0,0,1.04474251279935,0,0,1.52908960491121,0.263766978228454,0.123766352960047,0.662794751455832,0,0.602694528023977,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,1.53435074212236,0.361439152384566,1.50401373190767,2.31754430337318,0,0.486634870302636,0.0945348171640679,0.665188192387692,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,2.15271869829786,1.98613771219828,8.03142538096678,2.83734705758686,1.12135520028461,0,0.24666754841716,1.24484414159907,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0.23486899728753,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0.113432183160021,2.51145489964407,0.640672166455702,1.48352330811693,2.40072876867522,1.33968288009971,1.28820270022815,0.744467425326359,1.5189869901714,0.974370051611986,2.52433774244115,2.11714766877288,1.2931684545505,2.84007674013291,1.30977727695932,0.339121184620975,0,0,0,0,0,0,0,0,0,0,2.57296375277154,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.66004457238855,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0.714889968290738,0,0,0.325736184293735,0.355391948742546,0,0,0,0.499864955910285,0,0,0,0.239624855491583,2.29723871668228,0,1.73737568001095,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,1.50051156317903,0,0.415941723061614,1.96271887676878,0.473107245101804,0.937131319941706,0.902838299183157,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0,0,0,0,3.32870879020994,0.907170879989041,0.496215615637554,0.920771839728375,3.36792113319688,2.43464383585832,0,3.69964018630297,1.48418066444991,1.23367755042124,0.355123450626254,0.328508624055237,0.519254429183621,0.464841513839837,0,0,0,0.574072240823034,0.182091168006717,1.83574180943194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.0915694648183434,0,0,0,1.6068392984416,0.193341436584244,0,0.767518373630648,0,0.322260734604821,0.580066775656914,0.0852266274161009,0.623224249527161,0,0,0,0,2.32422774648643,6.92587163027408,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0.571890581771475,0,0.855877976067841,0.318203247925937,0,0.359744915166629,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0.731140468893853,0,0.136499911407986,1.69686518344455,0,0,1.32687795048244,0,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0.143411352204052,0.392996164052485,0,0.354761064070598,1.89996871767898,3.62224382255892,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78178808499583,0,0,0.140669416410513,0.111308705022906,0,0,0.796991953004279,0,0,0,0,1.55519793830904,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0.34945333648406,0.171986032471617,0,0,0,0.0969890164884194,0,0.677942222341597,0.137041924646751,0,0,0,0.160317640503067,0,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,2.23425921017803,0.229160424011684,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0.191915197319445,1.42939065274673,0,0,0.542999601753713,2.5926644736038,2.93928624098468,0,0,0.340776043570843,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0.151649117541648,0,0.235265819698172,0,0,1.04478362020812,0.467426619694449,0.554805861502613,0.947015026375446,1.0062716070103,0,2.05956061557231,3.17584939902802,0.310874401165561,0,0,0.449803112163605,0,2.07353103920428,0.797525143673985,0.521745061811734,1.05180326298053,1.90402606084398,0.406870733204662,0.181848659202559,0.751873899297419,0.464033759878494,0.796191777397232,0.400027764663154,1.03018711554838,0.673498977531838,0,0,0.214441591374926,0,1.36023555307363,1.85217979459067,0.244736704506468,1.07453304648892,0.308801447160972,2.85069264452319,0.176689145945881,1.3503982678964,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,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| ||
|short_description=p31@CCDC80 | |short_description=p31@CCDC80 | ||
}} | }} |
Latest revision as of 14:20, 19 September 2015
Short description: | p31@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 271bp_to_BC023639, BC042128_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.27e-17 | 76 |
fibroblast of tunica adventitia of artery | 6.05e-12 | 4 |
fibroblast of the aortic adventitia | 6.05e-12 | 4 |
skin fibroblast | 1.25e-11 | 23 |
fibrocyte | 1.11e-09 | 3 |
tendon cell | 1.11e-09 | 3 |
fat cell | 5.11e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
artery wall | 6.05e-12 | 4 |
tunica adventitia of artery | 6.05e-12 | 4 |
adventitia | 6.05e-12 | 4 |
tunica adventitia of blood vessel | 6.05e-12 | 4 |
aorta tunica adventitia | 6.05e-12 | 4 |
aorta wall | 6.05e-12 | 4 |
integument | 1.38e-10 | 46 |
integumental system | 1.38e-10 | 46 |
blood vessel layer | 3.71e-10 | 7 |
dense regular connective tissue | 1.11e-09 | 3 |
tendon | 1.11e-09 | 3 |
regular connective tissue | 1.11e-09 | 3 |
skin of body | 2.36e-09 | 41 |
cavity lining | 2.92e-08 | 12 |
serous membrane | 2.92e-08 | 12 |
omentum | 3.51e-08 | 6 |
peritoneum | 3.51e-08 | 6 |
abdominal cavity | 3.51e-08 | 6 |
visceral peritoneum | 3.51e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.04e-09 | 5 |
myotonic disease | 8.04e-09 | 5 |
muscle tissue disease | 8.04e-09 | 5 |
myopathy | 8.04e-09 | 5 |
muscular disease | 8.04e-09 | 5 |
myotonic dystrophy | 8.04e-09 | 5 |