FFCP PHASE1:Hg19::chr3:112358125..112358137,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=30649 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=373bp_to_BC023639,BC042128_5end | |||
|cluster_id=chr3:112358125..112358137,- | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_22_at_CCDC80_5end | |||
|id=chr3:112358125..112358137,- | |||
|ontology_enrichment_celltype=CL:0000055!1.25e-31!180;CL:0000057!3.28e-22!75;CL:0000680!1.25e-12!57;CL:0000056!1.25e-12!57;CL:0000355!1.25e-12!57;CL:0000187!2.57e-11!54;CL:0002334!8.13e-10!12;CL:0000183!8.20e-10!59;CL:0002620!1.03e-09!23;CL:0000393!7.50e-09!60;CL:0000211!7.50e-09!60;CL:0002494!4.94e-08!16;CL:0000192!1.00e-07!42;CL:0000514!1.00e-07!42;CL:0000048!4.78e-07!430;CL:0000723!7.98e-07!436;CL:0000136!8.65e-07!15;CL:0000499!9.24e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002334;6.57e-16;12!CL:0002620;7.84e-15;23!CL:0000057;4.47e-09;73!CL:1000306;1.58e-08;4!CL:0002547;1.58e-08;4!CL:0000136;1.65e-08;13!CL:0002615;8.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.25e-26,76;CL:0002334,8.12e-16,12;CL:0002620,7.58e-15,23;CL:0000048,2.62e-12,427;CL:0000723,8.16e-12,433;CL:0000034,3.52e-11,441;CL:0000136,9.91e-11,15;CL:0002320,5.01e-10,361;CL:0000134,1.22e-09,354;CL:1000306,1.47e-08,4;CL:0002547,1.47e-08,4;CL:0000219,1.12e-07,386;CL:0002615,9.69e-07,3;CL:0002579,9.88e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.77e-10;5!DOID:450;2.77e-10;5!DOID:66;2.77e-10;5!DOID:423;2.77e-10;5!DOID:0080000;2.77e-10;5!DOID:11722;2.77e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.11e-10,5;DOID:450,3.11e-10,5;DOID:66,3.11e-10,5;DOID:423,3.11e-10,5;DOID:0080000,3.11e-10,5;DOID:11722,3.11e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.67e-12!83;UBERON:0002329!8.67e-12!83;UBERON:0003077!8.67e-12!83;UBERON:0003059!8.67e-12!83;UBERON:0007282!8.67e-12!83;UBERON:0009618!8.67e-12!83;UBERON:0007285!8.67e-12!83;UBERON:0004290!1.74e-11!70;UBERON:0001134!8.02e-11!61;UBERON:0002036!8.02e-11!61;UBERON:0003082!8.02e-11!61;UBERON:0002385!8.18e-11!63;UBERON:0001015!8.18e-11!63;UBERON:0000383!8.18e-11!63;UBERON:0000486!1.34e-09!82;UBERON:0002199!2.95e-09!45;UBERON:0002416!2.95e-09!45;UBERON:0004872!1.56e-08!84;UBERON:0005256!6.08e-08!143;UBERON:0004923!9.96e-08!57;UBERON:0007100!1.11e-07!27;UBERON:0000948!1.13e-07!24;UBERON:0005498!1.13e-07!24;UBERON:0004140!1.13e-07!24;UBERON:0009881!1.13e-07!24;UBERON:0004141!1.13e-07!24;UBERON:0003084!1.13e-07!24;UBERON:0007005!1.13e-07!24;UBERON:0004139!1.13e-07!24;UBERON:0004291!1.13e-07!24;UBERON:0003102!1.71e-07!95;UBERON:0002097!6.30e-07!40;UBERON:0001013!6.81e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.93e-13;9!UBERON:0000042;2.93e-13;9!UBERON:0003688;7.31e-12;6!UBERON:0002358;7.31e-12;6!UBERON:0003684;7.31e-12;6!UBERON:0001178;7.31e-12;6!UBERON:0002199;3.55e-09;46!UBERON:0002416;3.55e-09;46!UBERON:0001013;9.11e-09;14!UBERON:0004797;1.58e-08;4!UBERON:0000415;1.58e-08;4!UBERON:0007240;1.58e-08;4!UBERON:0005742;1.58e-08;4!UBERON:0005734;1.58e-08;4!UBERON:0004664;1.58e-08;4!UBERON:0004663;1.58e-08;4!UBERON:0002097;1.53e-07;41!UBERON:0002384;4.63e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,4.21e-13,46;UBERON:0002416,4.21e-13,46;UBERON:0003688,7.85e-12,6;UBERON:0002358,7.85e-12,6;UBERON:0003684,7.85e-12,6;UBERON:0001178,7.85e-12,6;UBERON:0002384,2.62e-10,371;UBERON:0002097,7.45e-10,41;UBERON:0004457,1.84e-09,12;UBERON:0000042,1.84e-09,12;UBERON:0001013,8.32e-09,14;UBERON:0000415,1.47e-08,4;UBERON:0007240,1.47e-08,4;UBERON:0005742,1.47e-08,4;UBERON:0005734,1.47e-08,4;UBERON:0004664,1.47e-08,4;UBERON:0004663,1.47e-08,4;UBERON:0003102,1.37e-07,99 | |||
|phase1_expression=2.18014055124668,14.1306345768049,6.62485699251064,3.00219895059391,6.25745532198203,6.10636966870258,5.06599756336621,0.631719873426831,2.35067065379855,0,0,0.655324116390517,1.31883489114227,0.37129905888014,0.331397375727916,0,0,1.46062018077475,0,0.246242116153576,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,2.9408389224012,0.361439152384566,1.00267582127178,4.05570253090306,0.795285947051099,0.973269740605272,0.189069634328136,0.443458794925128,0.527008714158756,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,4.47274756525787,6.71141711822273,3.17782033951725,23.2337662806539,4.965357350777,5.60677600142307,1.06748995729705,1.2333377420858,2.48968828319813,0.269421344139376,0.163461903113459,0.605429710579726,0.576175924479999,0,0,0,0.149448680551801,0.352303495931295,0.323745888736263,0.421352420106746,0,0,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.919463387397059,0.300476117813194,0.226864366320042,5.74046834204358,5.55249210928275,5.08636562782948,5.10154863343484,4.01904864029912,3.09168648054755,2.23340227597908,5.06328996723799,2.53336213419116,4.03894038790583,4.14224543890347,1.77810662500693,10.2952781829818,2.51880245569101,1.52604533079439,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,1.56449532329816,2.57296375277154,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0.115930404975077,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0,0.80672114403045,1.03417372606222,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,1.64648067356154,0.65147236858747,0.710783897485092,0,0,0,0.799783929456456,0,0,0,0.479249710983165,1.14861935834114,0,3.04040744001916,0.410952645100767,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,1.00034104211935,0,1.24782516918484,4.10386674233472,1.41932173530541,0.937131319941706,0.300946099727719,0,1.03473071292505,2.65690239414175,0.184369168541703,0.60818530127658,0,0,0,0,0,0,8.32177197552485,1.5119514666484,3.47350930946288,2.30192959932094,5.89386198309454,9.09787959715477,2.55853624533352,8.84696566289841,2.96836132889982,2.31314540703983,1.06537035187876,0.98552587216571,1.55776328755086,1.16210378459959,0,0,0,1.03333003348146,2.00300284807389,1.96686622439136,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.656029291399411,0,0,0.183138929636687,0.165018999841176,0,0,1.6068392984416,0.193341436584244,0.616194468458578,0.460511024178389,0.551346289938122,0.644521469209642,1.30515024522806,0.426133137080504,1.06838442776085,0.165284915360978,0,0,0.10115778085555,2.32422774648643,10.3888074454111,0.6970372701606,0.308033580176089,0,0.869932992075073,0.37064843820784,0.429374660225974,0.372158369359667,0.949138274156178,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.179872457583315,1.64722217841633,0.471249609382746,0.606547444719948,0,0.842516912477962,0.975267478179181,0.243713489631284,0,1.09199929126389,3.11091950298168,3.39024349860728,0,1.99031692572366,0.876901770507525,0,0,0.405820753925408,0.6196469961995,1.40847801266121,0.717056761020258,0.589494246078727,1.07001315444375,0.354761064070598,4.22215270595328,4.61012850143863,0,0.349934720244983,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,1.78178808499583,0.921482106297696,0,0,0.445234820091624,0,0,0.996239941255349,0,0,0,0,2.79935628895627,0.0898683511473268,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0.139423744278603,1.76985594558733,0.113942055847001,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,1.57833761139756,0,0,0.821425535170343,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.783532859223623,1.22308667769421,0.171986032471617,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0.240476460754601,0.640358984218058,0.19980960958213,0,0.114536596165916,0,0,0.745515213392595,0,0.135904206073614,0.104602846312333,0.815985741090574,0,0,0,0,0.429765441419957,0,0.837847203816763,1.14580212005842,0,0,0.858452096273142,0.223171457441873,0.0671834724867263,1.44119953416961,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.104909176269996,0,0,0.191915197319445,0,0,0,2.17199840701485,3.45688596480507,4.57222304153173,0,0,0.851940108927109,0,0,0,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| |||
|short_description=p22@CCDC80 | |||
}} |
Latest revision as of 14:20, 19 September 2015
Short description: | p22@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 373bp_to_BC023639, BC042128_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.25e-26 | 76 |
preadipocyte | 8.12e-16 | 12 |
skin fibroblast | 7.58e-15 | 23 |
multi fate stem cell | 2.62e-12 | 427 |
somatic stem cell | 8.16e-12 | 433 |
stem cell | 3.52e-11 | 441 |
fat cell | 9.91e-11 | 15 |
connective tissue cell | 5.01e-10 | 361 |
mesenchymal cell | 1.22e-09 | 354 |
fibroblast of tunica adventitia of artery | 1.47e-08 | 4 |
fibroblast of the aortic adventitia | 1.47e-08 | 4 |
motile cell | 1.12e-07 | 386 |
adipocyte of omentum tissue | 9.69e-07 | 3 |
omentum preadipocyte | 9.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 4.21e-13 | 46 |
integumental system | 4.21e-13 | 46 |
omentum | 7.85e-12 | 6 |
peritoneum | 7.85e-12 | 6 |
abdominal cavity | 7.85e-12 | 6 |
visceral peritoneum | 7.85e-12 | 6 |
connective tissue | 2.62e-10 | 371 |
skin of body | 7.45e-10 | 41 |
cavity lining | 1.84e-09 | 12 |
serous membrane | 1.84e-09 | 12 |
adipose tissue | 8.32e-09 | 14 |
artery wall | 1.47e-08 | 4 |
tunica adventitia of artery | 1.47e-08 | 4 |
adventitia | 1.47e-08 | 4 |
tunica adventitia of blood vessel | 1.47e-08 | 4 |
aorta tunica adventitia | 1.47e-08 | 4 |
aorta wall | 1.47e-08 | 4 |
surface structure | 1.37e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.11e-10 | 5 |
myotonic disease | 3.11e-10 | 5 |
muscle tissue disease | 3.11e-10 | 5 |
myopathy | 3.11e-10 | 5 |
muscular disease | 3.11e-10 | 5 |
myotonic dystrophy | 3.11e-10 | 5 |