FFCP PHASE1:Hg19::chr7:7680080..7680107,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:7680080..7680107,-
|short_description=p1@RPA3
|description=CAGE_peak_1_at_RPA3_5end
|association_with_transcript=100bp_to_ENST00000462723_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6119 | |EntrezGene=6119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10291 | |HGNC=10291 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=100bp_to_ENST00000462723_5end | |||
|cluster_id=chr7:7680080..7680107,- | |||
|description=CAGE_peak_1_at_RPA3_5end | |||
|id=chr7:7680080..7680107,- | |||
|ontology_enrichment_celltype=CL:0000542!3.66e-18!53;CL:0000051!3.66e-18!53;CL:0000838!1.42e-17!52;CL:0000945!2.20e-11!24;CL:0000826!2.20e-11!24;CL:0000084!9.58e-09!25;CL:0000827!9.58e-09!25;CL:0000236!2.01e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.92e-11;53!CL:0000945;3.01e-11;24!CL:0000084;9.75e-09;25!CL:0000236;9.89e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.66e-18,53;CL:0000051,3.66e-18,53;CL:0000838,1.42e-17,52;CL:0000945,2.20e-11,24;CL:0000826,2.20e-11,24;CL:0000084,9.58e-09,25;CL:0000827,9.58e-09,25;CL:0000236,2.01e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.92e-11;53 | |||
|ontology_enrichment_disease=DOID:14566!4.75e-23!239;DOID:162!5.30e-23!235;DOID:305!2.07e-16!106;DOID:0050687!3.22e-15!143;DOID:0050686!9.63e-10!137;DOID:2531!1.00e-07!51;DOID:0060083!1.00e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.75e-23,239;DOID:162,5.30e-23,235;DOID:305,2.07e-16,106;DOID:0050687,3.22e-15,143;DOID:0050686,9.63e-10,137;DOID:2531,1.00e-07,51;DOID:0060083,1.00e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000072!2.13e-07!46 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,9.28e-07,47 | |||
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| ||
|short_description=p1@RPA3 | |||
}} | }} |
Latest revision as of 14:17, 19 September 2015
Short description: | p1@RPA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 100bp_to_ENST00000462723_5end |
EntrezGene: | RPA3 |
HGNC: | 10291 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.66e-18 | 53 |
common lymphoid progenitor | 3.66e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.42e-17 | 52 |
lymphocyte of B lineage | 2.20e-11 | 24 |
pro-B cell | 2.20e-11 | 24 |
T cell | 9.58e-09 | 25 |
pro-T cell | 9.58e-09 | 25 |
B cell | 2.01e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 9.28e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.75e-23 | 239 |
cancer | 5.30e-23 | 235 |
carcinoma | 2.07e-16 | 106 |
cell type cancer | 3.22e-15 | 143 |
organ system cancer | 9.63e-10 | 137 |
hematologic cancer | 1.00e-07 | 51 |
immune system cancer | 1.00e-07 | 51 |