FFCP PHASE1:Hg19::chr19:51538096..51538109,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=43849 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6360 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UKR2,E9PPC6,E9PR22 | |||
|association_with_transcript=8bp_to_ENST00000529888,ENST00000530943,ENST00000531374,uc010ycp.1,uc010ycq.1,uc010ycr.1,uc010ycs.1_5end | |||
|cluster_id=chr19:51538096..51538109,- | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_5_at_KLK12_5end | |||
|id=chr19:51538096..51538109,- | |||
|ontology_enrichment_celltype=CL:0000575!1.89e-14!2;CL:0002623!8.16e-10!3;CL:0002231!3.67e-09!3;CL:0002076!2.10e-08!43;CL:0002159!3.97e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0000575;2.98e-44;2!CL:0002623;1.35e-08;3!CL:0002159;3.44e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,4.65e-44,2;CL:0002623,1.21e-08,3;CL:0002159,3.66e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.87e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;6.87e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,6.87e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004921!6.34e-11!129;UBERON:0004185!6.34e-11!129;UBERON:0001042!1.22e-10!10;UBERON:0009145!1.22e-10!10;UBERON:0004119!7.16e-10!169;UBERON:0000925!7.16e-10!169;UBERON:0006595!7.16e-10!169;UBERON:0001723!8.52e-10!3;UBERON:0001033!8.52e-10!3;UBERON:0010056!8.52e-10!3;UBERON:0001007!9.03e-10!155;UBERON:0001555!9.03e-10!155;UBERON:0007026!9.03e-10!155;UBERON:0006562!1.10e-09!11;UBERON:0000078!4.58e-09!18;UBERON:0000161!2.85e-08!35;UBERON:0000077!2.94e-08!130;UBERON:0002372!4.07e-08!1;UBERON:0001961!4.07e-08!1;UBERON:0001744!4.07e-08!1;UBERON:0001735!4.07e-08!1;UBERON:0000072!5.91e-08!46;UBERON:0000166!9.83e-08!21;UBERON:0001043!1.04e-07!4;UBERON:0009143!1.04e-07!4;UBERON:0000964!1.19e-07!4;UBERON:0004348!1.19e-07!4;UBERON:0005427!1.19e-07!4;UBERON:0001041!2.12e-07!98;UBERON:0001004!2.26e-07!72;UBERON:0000065!9.38e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;1.87e-23;1!UBERON:0002372;4.59e-23;1!UBERON:0001961;4.59e-23;1!UBERON:0001744;4.59e-23;1!UBERON:0001042;4.59e-23;1!UBERON:0001735;4.59e-23;1!UBERON:0000964;1.00e-22;4!UBERON:0010409;1.00e-22;4!UBERON:0000341;2.32e-12;2!UBERON:0006562;3.06e-12;2!UBERON:0010313;1.05e-09;10!UBERON:0001043;1.00e-08;3!UBERON:0007811;4.06e-08;52!UBERON:0000033;6.69e-08;50!UBERON:0000153;7.27e-08;54!UBERON:0001041;3.04e-07;14!UBERON:0001801;3.44e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,4.10e-23,1;UBERON:0001961,4.10e-23,1;UBERON:0001744,4.10e-23,1;UBERON:0001735,4.10e-23,1;UBERON:0000964,1.25e-22,4;UBERON:0010409,1.25e-22,4;UBERON:0004348,1.25e-22,4;UBERON:0005427,1.25e-22,4;UBERON:0000341,2.32e-12,2;UBERON:0010313,1.15e-09,10;UBERON:0002342,1.15e-09,10;UBERON:0005062,1.15e-09,10;UBERON:0000153,5.43e-09,62;UBERON:0007811,5.43e-09,62;UBERON:0001043,9.66e-09,3;UBERON:0009143,9.66e-09,3;UBERON:0001444,1.64e-07,49;UBERON:0001801,3.66e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46149475846729,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51215543128185,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,5.43466236840025,0.385870790539723,0,13.6392015944842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13233981900981,0,0.0645889098360061,0,0,0,0,0.870866991587845,0.684466602170562,1.21233695426258,0.645499848534087,0,0,0,0,0,0,0,4.06896178315738,0,0,0 | |||
|short_description=p5@KLK12 | |||
}} |
Latest revision as of 14:06, 19 September 2015
Short description: | p5@KLK12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KLK12_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 8bp_to_ENST00000529888, ENST00000530943, ENST00000531374, uc010ycp.1, uc010ycq.1, uc010ycr.1, uc010ycs.1_5end |
EntrezGene: | KLK12 |
HGNC: | 6360 |
UniProt: | Q9UKR2E9PPC6E9PR22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 4.65e-44 | 2 |
acinar cell of salivary gland | 1.21e-08 | 3 |
general ecto-epithelial cell | 3.66e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
tonsil | 4.10e-23 | 1 |
mucosa-associated lymphoid tissue | 4.10e-23 | 1 |
lymphoid tissue | 4.10e-23 | 1 |
tonsillar ring | 4.10e-23 | 1 |
cornea | 1.25e-22 | 4 |
eye surface | 1.25e-22 | 4 |
optic eminence | 1.25e-22 | 4 |
corneal primordium | 1.25e-22 | 4 |
throat | 2.32e-12 | 2 |
neural crest-derived structure | 1.15e-09 | 10 |
neural crest | 1.15e-09 | 10 |
neural fold | 1.15e-09 | 10 |
anterior region of body | 5.43e-09 | 62 |
craniocervical region | 5.43e-09 | 62 |
esophagus | 9.66e-09 | 3 |
esophageal region | 9.66e-09 | 3 |
subdivision of head | 1.64e-07 | 49 |
anterior segment of eyeball | 3.66e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 6.87e-07 | 4 |