FFCP PHASE1:Hg19::chr8:96146086..96146125,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:96146086..96146125,+ to FFCP PHASE1:Hg19::chr8:96146086..96146125,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79666 | |EntrezGene=79666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20757 | |HGNC=20757 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H8W4 | |UniProt=Q9H8W4 | ||
|association_with_transcript=48bp_to_uc003yhn.1_5end | |||
|cluster_id=chr8:96146086..96146125,+ | |||
|coexpression_cluster_id=C4783 | |||
|description=CAGE_peak_3_at_PLEKHF2_5end | |||
|id=chr8:96146086..96146125,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.18e-46!172;CL:0000566!2.18e-46!172;CL:0002032!1.65e-43!165;CL:0000837!1.65e-43!165;CL:0000988!7.84e-41!182;CL:0000738!6.17e-37!140;CL:0000763!4.38e-32!112;CL:0000049!4.38e-32!112;CL:0002031!2.96e-31!124;CL:0002087!4.73e-28!119;CL:0000766!6.48e-24!76;CL:0000839!2.96e-21!70;CL:0000557!3.26e-21!71;CL:0002009!7.02e-18!65;CL:0002194!1.95e-17!63;CL:0000576!1.95e-17!63;CL:0000040!1.95e-17!63;CL:0000559!1.95e-17!63;CL:0002057!1.82e-13!42;CL:0000860!3.12e-13!45;CL:0000945!6.39e-12!24;CL:0000826!6.39e-12!24;CL:0000542!3.26e-10!53;CL:0000051!3.26e-10!53;CL:0000838!8.58e-10!52;CL:0000236!1.48e-09!14;CL:0000063!3.49e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.10e-12;39!CL:0000234;1.10e-12;39!CL:0000860;3.07e-12;33!CL:0002057;3.07e-12;33!CL:0000945;6.14e-12;24!CL:0000763;4.94e-11;100!CL:0000766;1.09e-10;69!CL:0000576;3.21e-10;48!CL:0000236;1.65e-09;13!CL:0000738;2.60e-09;136!CL:0000988;8.99e-08;177!CL:0002087;9.90e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.20e-48,168;CL:0002032,3.20e-45,161;CL:0000837,3.20e-45,161;CL:0000988,1.42e-43,177;CL:0000738,2.18e-38,136;CL:0000763,2.69e-34,108;CL:0000049,2.69e-34,108;CL:0002031,1.81e-32,120;CL:0002087,4.15e-29,115;CL:0000766,6.91e-26,72;CL:0000839,4.46e-23,66;CL:0000557,5.17e-23,67;CL:0002009,1.89e-19,61;CL:0002194,5.38e-19,59;CL:0000576,5.38e-19,59;CL:0000040,5.38e-19,59;CL:0000559,5.38e-19,59;CL:0000473,1.27e-16,48;CL:0000234,1.27e-16,48;CL:0000860,5.48e-14,42;CL:0002057,5.48e-14,42;CL:0000945,3.75e-12,24;CL:0000826,3.75e-12,24;CL:0000542,5.64e-10,53;CL:0000051,5.64e-10,53;CL:0000236,6.60e-10,14;CL:0000838,1.51e-09,52;CL:0002076,4.64e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002057;1.34e-10;42!CL:0000049;7.53e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!8.05e-09!51;DOID:0060083!8.05e-09!51;DOID:0050686!5.66e-08!137;DOID:162!1.79e-07!235;DOID:1240!1.92e-07!39;DOID:14566!3.04e-07!239;DOID:8692!3.99e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.28e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.18e-09,51;DOID:0060083,7.18e-09,51;DOID:0050686,8.37e-08,137;DOID:1240,1.45e-07,39;DOID:8692,2.17e-07,31;DOID:162,5.09e-07,235;DOID:14566,9.98e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.07e-20!102;UBERON:0003061!1.07e-20!102;UBERON:0002193!2.15e-19!112;UBERON:0002371!1.22e-15!80;UBERON:0001474!3.31e-14!86;UBERON:0002405!8.21e-13!115;UBERON:0004765!1.20e-10!101;UBERON:0001434!1.20e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.14e-23,98;UBERON:0003061,5.14e-23,98;UBERON:0002193,3.30e-21,108;UBERON:0002371,8.00e-18,76;UBERON:0002405,1.16e-16,93;UBERON:0001474,4.09e-16,82;UBERON:0004765,2.68e-14,90;UBERON:0001434,8.98e-11,100 | |||
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| ||
|short_description=p3@PLEKHF2 | |||
}} | }} |
Latest revision as of 13:51, 19 September 2015
Short description: | p3@PLEKHF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLEKHF2_5end |
Coexpression cluster: | C4783_CD14_CD19_breast_Burkitt_chronic_Mast_gall |
Association with transcript: | 48bp_to_uc003yhn.1_5end |
EntrezGene: | PLEKHF2 |
HGNC: | 20757 |
UniProt: | Q9H8W4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.20e-48 | 168 |
hematopoietic oligopotent progenitor cell | 3.20e-45 | 161 |
hematopoietic multipotent progenitor cell | 3.20e-45 | 161 |
hematopoietic cell | 1.42e-43 | 177 |
leukocyte | 2.18e-38 | 136 |
myeloid cell | 2.69e-34 | 108 |
common myeloid progenitor | 2.69e-34 | 108 |
hematopoietic lineage restricted progenitor cell | 1.81e-32 | 120 |
nongranular leukocyte | 4.15e-29 | 115 |
myeloid leukocyte | 6.91e-26 | 72 |
myeloid lineage restricted progenitor cell | 4.46e-23 | 66 |
granulocyte monocyte progenitor cell | 5.17e-23 | 67 |
macrophage dendritic cell progenitor | 1.89e-19 | 61 |
monopoietic cell | 5.38e-19 | 59 |
monocyte | 5.38e-19 | 59 |
monoblast | 5.38e-19 | 59 |
promonocyte | 5.38e-19 | 59 |
defensive cell | 1.27e-16 | 48 |
phagocyte | 1.27e-16 | 48 |
classical monocyte | 5.48e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.48e-14 | 42 |
lymphocyte of B lineage | 3.75e-12 | 24 |
pro-B cell | 3.75e-12 | 24 |
lymphocyte | 5.64e-10 | 53 |
common lymphoid progenitor | 5.64e-10 | 53 |
B cell | 6.60e-10 | 14 |
lymphoid lineage restricted progenitor cell | 1.51e-09 | 52 |
endo-epithelial cell | 4.64e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.14e-23 | 98 |
blood island | 5.14e-23 | 98 |
hemolymphoid system | 3.30e-21 | 108 |
bone marrow | 8.00e-18 | 76 |
immune system | 1.16e-16 | 93 |
bone element | 4.09e-16 | 82 |
skeletal element | 2.68e-14 | 90 |
skeletal system | 8.98e-11 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.18e-09 | 51 |
immune system cancer | 7.18e-09 | 51 |
organ system cancer | 8.37e-08 | 137 |
leukemia | 1.45e-07 | 39 |
myeloid leukemia | 2.17e-07 | 31 |
cancer | 5.09e-07 | 235 |
disease of cellular proliferation | 9.98e-07 | 239 |