FFCP PHASE1:Hg19::chr8:95908044..95908055,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=137682 | |EntrezGene=137682 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28625 | |HGNC=28625 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000396111_5end | |association_with_transcript=0bp_to_ENST00000396111_5end | ||
|cluster_id=chr8:95908044..95908055,+ | |||
|coexpression_cluster_id=C4782 | |||
|description=CAGE_peak_4_at_C8orf38_5end | |description=CAGE_peak_4_at_C8orf38_5end | ||
|id=chr8:95908044..95908055,+ | |id=chr8:95908044..95908055,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.62e-10!53;CL:0000051!1.62e-10!53;CL:0000838!3.41e-10!52;CL:0000084!4.56e-07!25;CL:0000827!4.56e-07!25 | |ontology_enrichment_celltype=CL:0000542!1.62e-10!53;CL:0000051!1.62e-10!53;CL:0000838!3.41e-10!52;CL:0000084!4.56e-07!25;CL:0000827!4.56e-07!25 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.75e-20!235;DOID:14566!5.95e-19!239;DOID:0050687!5.06e-15!143;DOID:305!1.62e-14!106;DOID:0050686!5.30e-09!137;DOID:2531!1.07e-08!51;DOID:0060083!1.07e-08!51;DOID:1240!2.71e-07!39 | |ontology_enrichment_disease=DOID:162!1.75e-20!235;DOID:14566!5.95e-19!239;DOID:0050687!5.06e-15!143;DOID:305!1.62e-14!106;DOID:0050686!5.30e-09!137;DOID:2531!1.07e-08!51;DOID:0060083!1.07e-08!51;DOID:1240!2.71e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.11e-09,235;DOID:14566,1.19e-08,239;DOID:305,1.16e-07,106;DOID:0050687,4.15e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.19e-08!57;UBERON:0005068!1.19e-08!57;UBERON:0006241!1.19e-08!57;UBERON:0007135!1.19e-08!57;UBERON:0000955!3.65e-08!69;UBERON:0006238!3.65e-08!69;UBERON:0001017!6.82e-08!82;UBERON:0002020!7.06e-08!34;UBERON:0003528!7.06e-08!34;UBERON:0002780!1.28e-07!41;UBERON:0001890!1.28e-07!41;UBERON:0006240!1.28e-07!41;UBERON:0001893!1.50e-07!34;UBERON:0002791!1.78e-07!33;UBERON:0005743!2.08e-07!86;UBERON:0000073!2.28e-07!94;UBERON:0001016!2.28e-07!94;UBERON:0003080!3.50e-07!42 | |ontology_enrichment_uberon=UBERON:0001049!1.19e-08!57;UBERON:0005068!1.19e-08!57;UBERON:0006241!1.19e-08!57;UBERON:0007135!1.19e-08!57;UBERON:0000955!3.65e-08!69;UBERON:0006238!3.65e-08!69;UBERON:0001017!6.82e-08!82;UBERON:0002020!7.06e-08!34;UBERON:0003528!7.06e-08!34;UBERON:0002780!1.28e-07!41;UBERON:0001890!1.28e-07!41;UBERON:0006240!1.28e-07!41;UBERON:0001893!1.50e-07!34;UBERON:0002791!1.78e-07!33;UBERON:0005743!2.08e-07!86;UBERON:0000073!2.28e-07!94;UBERON:0001016!2.28e-07!94;UBERON:0003080!3.50e-07!42 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.52e-09,89;UBERON:0001017,5.97e-09,81;UBERON:0000955,4.40e-08,68;UBERON:0006238,4.40e-08,68;UBERON:0001049,6.61e-08,56;UBERON:0005068,6.61e-08,56;UBERON:0006241,6.61e-08,56;UBERON:0007135,6.61e-08,56 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0.626909442956176,0.85870796139317,0,0.251085279189606,0,0,0,0,0.383829398097213,0,0,0,0,1.31694240986513,0.426507697462265,3.52320527201817,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,1.75996244461323,1.09227722252426,0.889509253863555,1.70692089026603,0.400395987036012,1.72425731986345,1.98313461835459,0,2.84606484554724,0,0.764546456250458,1.32171328579026,1.12101712596307,3.423993102076,0.786839080455332,2.35806457649499,0.411202997999018,0.167186495390678,2.60737813306872,2.8406868344084,0,0.111410456885174,1.47302953737419,1.32920336750173,0.270803863765016,0,0,0.493313713811028,0.552700035571697,0.289803085735052,0,0.535081656179426,0,0.226618685395132,0.766440987203842,0.34362744548263,0.253019692019503,0.95569624297229,1.30216690771284,0,0.301150238155546,0.255973222308837,0,0.473554504088034,0.821127996921047,0.403213486449465,0.802320587350522,1.01377082717959,0,0,0,0.361439152384566,0,0,0,0,0,0.443458794925128,0.087834785693126,0.523916301990851,0,0,0,0,0,0.238490624305342,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.23486899728753,0,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0.717558542755448,0,0,0,0.103052529238439,0,0,0.843881661206331,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,1.01150814046861,1.20505514941741,1.10293972732394,0.653638332277218,0.71181185733329,0.674156540800822,1.37355025587742,0.769494313892781,0.738155454624648,0,0,0,0,0,0.590789906681404,8.82926198829301,0.245976877086227,0,0,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0.288732895522148,0,0,1.58040879591855,0,0,0,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0.264145302039678,0.414656231081544,0,0.50496973370552,0.317489471460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0.394061520403854,1.50939302401662,2.05348858047597,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.431428401637234,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.966875596732978,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0.501689773854853,0.509752546090077,0,0.447749509444357,0.219259876645935,0.784306353074702,0.256450125116389,0,0,0.721287081534056,0.366277859273374,0.082509499920588,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,1.01489521846434,0,0,0,0,0.648473311192717,0,0,0.320472213382419,0,0.245040215981032,0.743212700502875,0.432807638929335,1.42283686696828,0.797131363644112,9.38023045734238,0.766021480529467,2.11673582723883,0.324621940274555,1.12318871245384,1.36940807419915,0.47003968731907,2.50634477090067,0.338583555603207,0.321176150207399,0.201799707191048,0.425846237690326,0.343505344755765,0.614481528616916,0,0,0.586164286206121,0.278406173895242,0,0,1.6653598399891,0,0.561421621224659,0.146508179271894,0.121360521749513,0.334330152832435,0.284136146806413,0,0.593929361665277,0.307160702099232,0.994147647766298,1.68803299692615,0.556543525114529,0.16480387422676,7.81164010073576,0.19924798825107,0,1.25966373927138,0.102268682502155,0.123084805461069,0,0.898683511473268,0,0,0.295930216910801,0,0,0.969332746095218,0.278304294485554,3.99227596002388,0.7812832832557,0.349839999984783,0,0.455173793141999,2.2882828526349,0.472775363535873,3.44743373241465,0.291604613383254,8.50762475173132,0,1.32656082487949,0,4.75490817704266,0,0,2.06983080686081,0.278847488557207,0.153900517007594,0.227884111694002,0,1.07709173291727,0.108647371922008,0,0.0915975934018623,0,2.04386596391473,1.8837630767403,2.32696354660219,0.676786981851542,0.392125068635479,0.335643173951685,0,0.794682894901893,0,0.326465616318295,0.282706142867882,1.94749775767882,0.995261931078505,0.796118080530053,0.611030144933625,0.889563386041866,0.741383633679017,0.730953646538188,0.808813595768125,0,1.1713222286267,0.182454789215666,0.391329237864179,0,0,0,1.83643656978294,0,1.05226393590145,0.518440956986236,4.6525771089503,1.65495977937749,2.19753042885058,4.77889719091835,0.569219092059585,0,0,0.979923974143776,1.13176968554523,0.17472666824203,0.859930162358083,2.12863928835987,1.38869702463753,1.39596276990456,0,0.176512253383001,0,0.274083849293502,0.596143835108969,0.3798647757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| ||
|short_description=p4@C8orf38 | |short_description=p4@C8orf38 | ||
}} | }} |
Latest revision as of 13:29, 19 September 2015
Short description: | p4@C8orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C8orf38_5end |
Coexpression cluster: | C4782_small_gastrointestinal_medulloblastoma_Hodgkin_hepatoblastoma_anaplastic_acute |
Association with transcript: | 0bp_to_ENST00000396111_5end |
EntrezGene: | C8orf38 |
HGNC: | 28625 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 4.52e-09 | 89 |
central nervous system | 5.97e-09 | 81 |
brain | 4.40e-08 | 68 |
future brain | 4.40e-08 | 68 |
neural tube | 6.61e-08 | 56 |
neural rod | 6.61e-08 | 56 |
future spinal cord | 6.61e-08 | 56 |
neural keel | 6.61e-08 | 56 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.11e-09 | 235 |
disease of cellular proliferation | 1.19e-08 | 239 |
carcinoma | 1.16e-07 | 106 |
cell type cancer | 4.15e-07 | 143 |