FFCP PHASE1:Hg19::chr22:27043104..27043111,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
| Line 8: | Line 8: | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-63bp_to_ENST00000440347_5end | |association_with_transcript=-63bp_to_ENST00000440347_5end | ||
|cluster_id=chr22:27043104..27043111,+ | |||
|coexpression_cluster_id=C171 | |coexpression_cluster_id=C171 | ||
|description=CAGE_peak_27_at_MIAT_5end | |description=CAGE_peak_27_at_MIAT_5end | ||
Latest revision as of 13:18, 19 September 2015
| Short description: | p27@MIAT |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_27_at_MIAT_5end |
| Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
| Association with transcript: | -63bp_to_ENST00000440347_5end |
| EntrezGene: | NA |
| HGNC: | 33425 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p27@MIAT |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| Merkel cell | 3.29e-195 | 2 |
| keratinocyte | 3.49e-79 | 5 |
| stratified squamous epithelial cell | 2.83e-66 | 6 |
| keratin accumulating cell | 2.83e-66 | 6 |
| stratified epithelial cell | 2.83e-66 | 6 |
| keratinizing barrier epithelial cell | 2.83e-66 | 6 |
| epithelial fate stem cell | 2.83e-66 | 6 |
| stratified epithelial stem cell | 2.83e-66 | 6 |
| surface ectodermal cell | 2.83e-66 | 6 |
| epidermal cell | 9.75e-45 | 9 |
Showing 1 to 10 of 18 entries
| Ontology term | p-value | n |
|---|---|---|
| skin epidermis | 1.82e-27 | 15 |
| outer epithelium | 1.82e-27 | 15 |
| enveloping layer of ectoderm | 1.82e-27 | 15 |
| skin of body | 6.32e-11 | 41 |
| integument | 7.07e-10 | 46 |
| integumental system | 7.07e-10 | 46 |
Showing 1 to 6 of 6 entries
