FFCP PHASE1:Hg19::chr5:10250349..10250362,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:10250349..10250362,+ to FFCP PHASE1:Hg19::chr5:10250349..10250362,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22948 | |EntrezGene=22948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1618 | |HGNC=1618 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000511700_5end | |||
|cluster_id=chr5:10250349..10250362,+ | |||
|coexpression_cluster_id=C4443 | |||
|description=CAGE_peak_2_at_CCT5_5end | |||
|id=chr5:10250349..10250362,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.51e-16!254;CL:0000548!3.63e-13!679;CL:0000004!3.63e-13!679;CL:0000255!3.63e-13!679;CL:0000012!1.64e-12!682;CL:0002321!4.60e-08!248;CL:0000220!1.26e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.54e-17,253;CL:0002321,1.13e-07,250 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.16e-08;29 | |||
|ontology_enrichment_disease=DOID:14566!2.07e-47!239;DOID:162!8.15e-47!235;DOID:0050687!4.12e-37!143;DOID:305!1.37e-32!106;DOID:0050686!2.66e-16!137;DOID:0050615!4.37e-07!16;DOID:7!6.59e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:305;3.32e-10;106!DOID:0050687;1.01e-08;143!DOID:0050615;3.64e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.02e-47,239;DOID:162,7.98e-47,235;DOID:0050687,4.54e-37,143;DOID:305,1.54e-32,106;DOID:0050686,2.44e-16,137;DOID:0050615,4.34e-07,16;DOID:7,7.28e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.27e-07!9;UBERON:0008947!6.32e-07!38;UBERON:0003258!6.32e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.10e-07;9!UBERON:0001557;1.10e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.26e-07,9;UBERON:0008947,6.35e-07,38;UBERON:0003258,6.35e-07,38 | |||
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| ||
|short_description=p2@CCT5 | |||
}} | }} |
Latest revision as of 13:16, 19 September 2015
Short description: | p2@CCT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCT5_5end |
Coexpression cluster: | C4443_Hep2_oral_mucinous_epitheloid_cervical_epidermoid_acute |
Association with transcript: | 0bp_to_ENST00000511700_5end |
EntrezGene: | CCT5 |
HGNC: | 1618 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.54e-17 | 253 |
embryonic cell | 1.13e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.26e-07 | 9 |
respiratory primordium | 6.35e-07 | 38 |
endoderm of foregut | 6.35e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.02e-47 | 239 |
cancer | 7.98e-47 | 235 |
cell type cancer | 4.54e-37 | 143 |
carcinoma | 1.54e-32 | 106 |
organ system cancer | 2.44e-16 | 137 |
respiratory system cancer | 4.34e-07 | 16 |
disease of anatomical entity | 7.28e-07 | 39 |