FFCP PHASE1:Hg19::chr5:102201687..102201717,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5066 | |EntrezGene=5066 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8596 | |HGNC=8596 | ||
|TSSclassifier=strong | |||
|UniProt=P19021 | |UniProt=P19021 | ||
|association_with_transcript=0bp_to_ENST00000304400_5end | |association_with_transcript=0bp_to_ENST00000304400_5end | ||
|cluster_id=chr5:102201687..102201717,+ | |||
|description=CAGE_peak_2_at_PAM_5end | |description=CAGE_peak_2_at_PAM_5end | ||
|id=chr5:102201687..102201717,+ | |id=chr5:102201687..102201717,+ | ||
|ontology_enrichment_celltype=CL:0002620;3.36e-13;23!CL:0000359;4.13e-10;32!CL:0000057;2.84e-08;73!CL:0000192;4.06e-07;43!CL:0002334;6.83e-07;12 | |ontology_enrichment_celltype=CL:0000055!7.20e-28!180;CL:0000057!5.15e-21!75;CL:0002620!7.96e-13!23;CL:0000359!3.48e-10!32;CL:0000680!2.95e-09!57;CL:0000056!2.95e-09!57;CL:0000355!2.95e-09!57;CL:0000192!4.13e-09!42;CL:0000514!4.13e-09!42;CL:0000187!8.12e-09!54;CL:0000183!1.45e-07!59;CL:0000222!1.66e-07!119;CL:0000393!2.12e-07!60;CL:0000211!2.12e-07!60 | ||
| | |ontology_enrichment_celltype_v019=CL:0002620;3.36e-13;23!CL:0000359;4.13e-10;32!CL:0000057;2.84e-08;73!CL:0000192;4.06e-07;43!CL:0002334;6.83e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.26e-22,76;CL:0002620,3.58e-13,23;CL:0000359,1.89e-10,32;CL:0000680,2.99e-09,58;CL:0000056,2.99e-09,58;CL:0000355,2.99e-09,58;CL:0000192,4.86e-09,43;CL:0000514,4.86e-09,43;CL:0000187,8.49e-09,55;CL:0000393,5.73e-07,61;CL:0000211,5.73e-07,61;CL:0000222,5.85e-07,121;CL:0002334,7.11e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;4.06e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004573;4.19e-11;33!UBERON:0004571;4.19e-11;33!UBERON:0007100;8.04e-11;25!UBERON:0001637;1.13e-09;42!UBERON:0003509;1.13e-09;42!UBERON:0004572;1.13e-09;42!UBERON:0000948;6.45e-09;22!UBERON:0000947;3.45e-07;21!UBERON:0010191;3.45e-07;21!UBERON:0002097;5.72e-07;41!UBERON:0002385;8.15e-07;31!UBERON:0001015;8.15e-07;31!UBERON:0000383;8.15e-07;31 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!7.35e-15!84;UBERON:0004290!2.43e-13!70;UBERON:0000914!2.49e-13!83;UBERON:0002329!2.49e-13!83;UBERON:0003077!2.49e-13!83;UBERON:0003059!2.49e-13!83;UBERON:0007282!2.49e-13!83;UBERON:0009618!2.49e-13!83;UBERON:0007285!2.49e-13!83;UBERON:0001009!5.17e-13!113;UBERON:0000468!5.28e-13!659;UBERON:0001981!1.31e-12!60;UBERON:0007500!1.31e-12!60;UBERON:0004537!1.31e-12!60;UBERON:0006965!1.31e-12!60;UBERON:0001637!1.46e-12!42;UBERON:0003509!1.46e-12!42;UBERON:0004572!1.46e-12!42;UBERON:0000467!7.00e-12!625;UBERON:0000480!1.00e-11!626;UBERON:0000055!1.06e-11!69;UBERON:0004573!1.07e-11!33;UBERON:0004571!1.07e-11!33;UBERON:0004535!1.12e-11!110;UBERON:0002049!1.32e-11!79;UBERON:0007798!1.32e-11!79;UBERON:0007100!1.69e-11!27;UBERON:0002385!8.50e-11!63;UBERON:0001015!8.50e-11!63;UBERON:0000383!8.50e-11!63;UBERON:0001134!1.20e-10!61;UBERON:0002036!1.20e-10!61;UBERON:0003082!1.20e-10!61;UBERON:0000486!9.89e-10!82;UBERON:0000948!1.23e-09!24;UBERON:0005498!1.23e-09!24;UBERON:0004140!1.23e-09!24;UBERON:0009881!1.23e-09!24;UBERON:0004141!1.23e-09!24;UBERON:0003084!1.23e-09!24;UBERON:0007005!1.23e-09!24;UBERON:0004139!1.23e-09!24;UBERON:0004291!1.23e-09!24;UBERON:0002199!1.08e-08!45;UBERON:0002416!1.08e-08!45;UBERON:0002097!1.51e-08!40;UBERON:0000475!1.39e-07!365;UBERON:0002204!2.32e-07!167;UBERON:0003914!3.32e-07!118;UBERON:0000947!6.74e-07!21;UBERON:0010191!6.74e-07!21;UBERON:0000926!8.08e-07!448;UBERON:0004120!8.08e-07!448;UBERON:0006603!8.08e-07!448;UBERON:0007023!8.15e-07!115;UBERON:0000477!9.50e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.19e-11;33!UBERON:0004571;4.19e-11;33!UBERON:0007100;8.04e-11;25!UBERON:0001637;1.13e-09;42!UBERON:0003509;1.13e-09;42!UBERON:0004572;1.13e-09;42!UBERON:0000948;6.45e-09;22!UBERON:0000947;3.45e-07;21!UBERON:0010191;3.45e-07;21!UBERON:0002097;5.72e-07;41!UBERON:0002385;8.15e-07;31!UBERON:0001015;8.15e-07;31!UBERON:0000383;8.15e-07;31 | |||
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| ||
|short_description=p2@PAM | |short_description=p2@PAM | ||
}} | }} |
Latest revision as of 13:05, 19 September 2015
Short description: | p2@PAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000304400_5end |
EntrezGene: | PAM |
HGNC: | 8596 |
UniProt: | P19021 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.26e-22 | 76 |
skin fibroblast | 3.58e-13 | 23 |
vascular associated smooth muscle cell | 1.89e-10 | 32 |
muscle precursor cell | 2.99e-09 | 58 |
myoblast | 2.99e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.99e-09 | 58 |
smooth muscle cell | 4.86e-09 | 43 |
smooth muscle myoblast | 4.86e-09 | 43 |
muscle cell | 8.49e-09 | 55 |
electrically responsive cell | 5.73e-07 | 61 |
electrically active cell | 5.73e-07 | 61 |
mesodermal cell | 5.85e-07 | 121 |
preadipocyte | 7.11e-07 | 12 |