FFCP PHASE1:Hg19::chr19:51307844..51307859,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84798 | |EntrezGene=84798 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29667 | |HGNC=29667 | ||
|TSSclassifier=strong | |||
|UniProt=Q6RUI8 | |UniProt=Q6RUI8 | ||
|association_with_transcript=112bp_to_ENST00000345523,NM_199250_5end | |association_with_transcript=112bp_to_ENST00000345523,NM_199250_5end | ||
|cluster_id=chr19:51307844..51307859,- | |||
|description=CAGE_peak_1_at_C19orf48_5end | |description=CAGE_peak_1_at_C19orf48_5end | ||
|id=chr19:51307844..51307859,- | |id=chr19:51307844..51307859,- | ||
|ontology_enrichment_celltype=CL:0000066!1.43e-29!254;CL:0000012!1.69e-23!682;CL:0000548!2.24e-23!679;CL:0000004!2.24e-23!679;CL:0000255!2.24e-23!679;CL:0002321!3.57e-12!248;CL:0000003!5.44e-12!722;CL:0000063!9.94e-12!578;CL:0000220!1.06e-11!246;CL:0000076!5.04e-10!62;CL:0000144!1.79e-08!625 | |ontology_enrichment_celltype=CL:0000066!1.43e-29!254;CL:0000012!1.69e-23!682;CL:0000548!2.24e-23!679;CL:0000004!2.24e-23!679;CL:0000255!2.24e-23!679;CL:0002321!3.57e-12!248;CL:0000003!5.44e-12!722;CL:0000063!9.94e-12!578;CL:0000220!1.06e-11!246;CL:0000076!5.04e-10!62;CL:0000144!1.79e-08!625 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.37e-29,253;CL:0002321,2.47e-12,250;CL:0000076,3.69e-10,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.89e-44!235;DOID:14566!1.14e-41!239;DOID:0050687!4.70e-24!143;DOID:0050686!3.20e-23!137;DOID:305!3.26e-20!106;DOID:2531!1.63e-18!51;DOID:0060083!1.63e-18!51;DOID:1240!3.20e-16!39;DOID:8692!5.94e-13!31 | |ontology_enrichment_disease=DOID:162!4.89e-44!235;DOID:14566!1.14e-41!239;DOID:0050687!4.70e-24!143;DOID:0050686!3.20e-23!137;DOID:305!3.26e-20!106;DOID:2531!1.63e-18!51;DOID:0060083!1.63e-18!51;DOID:1240!3.20e-16!39;DOID:8692!5.94e-13!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.62e-12;39!DOID:8692;1.75e-12;31!DOID:2531;3.38e-11;51!DOID:0060083;3.38e-11;51!DOID:305;4.98e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.78e-44,235;DOID:14566,1.11e-41,239;DOID:0050687,4.40e-24,143;DOID:0050686,3.34e-23,137;DOID:305,3.24e-20,106;DOID:2531,1.63e-18,51;DOID:0060083,1.63e-18,51;DOID:1240,3.19e-16,39;DOID:8692,5.92e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0003104!2.89e-07!238;UBERON:0009142!2.89e-07!238;UBERON:0000072!4.20e-07!46;UBERON:0001041!7.72e-07!98;UBERON:0000077!7.89e-07!130 | |ontology_enrichment_uberon=UBERON:0003104!2.89e-07!238;UBERON:0009142!2.89e-07!238;UBERON:0000072!4.20e-07!46;UBERON:0001041!7.72e-07!98;UBERON:0000077!7.89e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0000072;4.74e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,4.86e-07,47 | |||
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| ||
|short_description=p1@C19orf48 | |short_description=p1@C19orf48 | ||
}} | }} |
Latest revision as of 12:55, 19 September 2015
Short description: | p1@C19orf48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C19orf48_5end |
Coexpression cluster: | NA |
Association with transcript: | 112bp_to_ENST00000345523, NM_199250_5end |
EntrezGene: | C19orf48 |
HGNC: | 29667 |
UniProt: | Q6RUI8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.37e-29 | 253 |
embryonic cell | 2.47e-12 | 250 |
squamous epithelial cell | 3.69e-10 | 63 |
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 4.86e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.78e-44 | 235 |
disease of cellular proliferation | 1.11e-41 | 239 |
cell type cancer | 4.40e-24 | 143 |
organ system cancer | 3.34e-23 | 137 |
carcinoma | 3.24e-20 | 106 |
hematologic cancer | 1.63e-18 | 51 |
immune system cancer | 1.63e-18 | 51 |
leukemia | 3.19e-16 | 39 |
myeloid leukemia | 5.92e-13 | 31 |