FFCP PHASE1:Hg19::chr15:85147127..85147142,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54993 | |EntrezGene=54993 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20994 | |HGNC=20994 | ||
|TSSclassifier=strong | |||
|UniProt=F5GY18,F5H3F3,F5GZ04 | |UniProt=F5GY18,F5H3F3,F5GZ04 | ||
|association_with_transcript=0bp_to_ENST00000485222,ENST00000538076,ENST00000540894,ENST00000541040_5end | |association_with_transcript=0bp_to_ENST00000485222,ENST00000538076,ENST00000540894,ENST00000541040_5end | ||
|cluster_id=chr15:85147127..85147142,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_5_at_ZSCAN2_5end | |description=CAGE_peak_5_at_ZSCAN2_5end | ||
|id=chr15:85147127..85147142,+ | |id=chr15:85147127..85147142,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.66e-33!5;CL:0000039!7.10e-16!7;CL:0000586!7.10e-16!7;CL:0000540!8.30e-11!6;CL:0000031!8.30e-11!6;CL:0000404!8.30e-11!6;CL:0000047!3.24e-08!8;CL:0002601!7.45e-08!1;CL:0002574!1.75e-07!1 | |ontology_enrichment_celltype=CL:0002322!2.66e-33!5;CL:0000039!7.10e-16!7;CL:0000586!7.10e-16!7;CL:0000540!8.30e-11!6;CL:0000031!8.30e-11!6;CL:0000404!8.30e-11!6;CL:0000047!3.24e-08!8;CL:0002601!7.45e-08!1;CL:0002574!1.75e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.65e-81;5!CL:0000039;2.00e-38;7!CL:0000586;2.00e-38;7!CL:0002321;3.09e-27;15!CL:0000540;1.53e-25;6!CL:0000404;1.53e-25;6!CL:0000148;2.12e-15;10!CL:0000147;3.48e-11;14!CL:0000710;5.29e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.06e-81,5;CL:0000039,2.10e-38,7;CL:0000586,2.10e-38,7;CL:0000540,1.41e-25,6;CL:0000031,1.41e-25,6;CL:0000404,1.41e-25,6;CL:0000047,2.26e-19,8;CL:0000148,2.34e-15,10;CL:0000541,2.34e-15,10;CL:0000147,3.73e-11,14;CL:0000133,1.46e-09,59;CL:0000710,5.55e-08,20;CL:0000221,7.69e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.70e-27;10!UBERON:0005564;4.70e-27;10!CL:0000031;1.53e-25;6 | |||
|ontology_enrichment_disease=DOID:178!9.72e-08!1;DOID:326!9.72e-08!1;DOID:3978!9.72e-08!1;DOID:3394!9.72e-08!1;DOID:5844!9.72e-08!1;DOID:3095!1.89e-07!22;DOID:2994!1.89e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.63e-12;22!DOID:2994;1.63e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.66e-12,22;DOID:2994,1.66e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!8.60e-21!8;UBERON:0003135!4.48e-15!11;UBERON:0000991!8.74e-08!21;UBERON:0009196!8.74e-08!21;UBERON:0009117!8.74e-08!21;UBERON:0005564!8.74e-08!21;UBERON:0004176!2.03e-07!22;UBERON:0003101!2.03e-07!22;UBERON:0000079!2.03e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.09e-33;8!UBERON:0003135;1.23e-24;11!UBERON:0000922;1.34e-16;49!UBERON:0000991;4.29e-13;21!UBERON:0003101;1.63e-12;22!UBERON:0000079;1.63e-12;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.13e-33,8;UBERON:0003135,1.26e-24,11;UBERON:0000991,4.36e-13,21;UBERON:0009196,4.36e-13,21;UBERON:0009117,4.36e-13,21;UBERON:0005564,4.36e-13,21;UBERON:0004176,1.66e-12,22;UBERON:0003101,1.66e-12,22;UBERON:0000079,1.66e-12,22 | |||
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|short_description=p5@ZSCAN2 | |short_description=p5@ZSCAN2 | ||
}} | }} |
Latest revision as of 12:41, 19 September 2015
Short description: | p5@ZSCAN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ZSCAN2_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000485222, ENST00000538076, ENST00000540894, ENST00000541040_5end |
EntrezGene: | ZSCAN2 |
HGNC: | 20994 |
UniProt: | F5GY18F5H3F3F5GZ04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.06e-81 | 5 |
germ line cell | 2.10e-38 | 7 |
germ cell | 2.10e-38 | 7 |
neuron | 1.41e-25 | 6 |
neuroblast | 1.41e-25 | 6 |
electrically signaling cell | 1.41e-25 | 6 |
neuronal stem cell | 2.26e-19 | 8 |
melanocyte | 2.34e-15 | 10 |
melanoblast | 2.34e-15 | 10 |
pigment cell | 3.73e-11 | 14 |
neurectodermal cell | 1.46e-09 | 59 |
neurecto-epithelial cell | 5.55e-08 | 20 |
ectodermal cell | 7.69e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 1.13e-33 | 8 |
male reproductive organ | 1.26e-24 | 11 |
gonad | 4.36e-13 | 21 |
indifferent external genitalia | 4.36e-13 | 21 |
indifferent gonad | 4.36e-13 | 21 |
gonad primordium | 4.36e-13 | 21 |
external genitalia | 1.66e-12 | 22 |
male organism | 1.66e-12 | 22 |
male reproductive system | 1.66e-12 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.66e-12 | 22 |
germ cell cancer | 1.66e-12 | 22 |