FFCP PHASE1:Hg19::chr15:85147079..85147099,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54993 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20994 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=28bp_to_uc010uox.1,uc010uoy.1,uc010uoz.1_5end | |||
|cluster_id=chr15:85147079..85147099,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_4_at_ZSCAN2_5end | |||
|id=chr15:85147079..85147099,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.17e-26!5;CL:0000039!1.89e-12!7;CL:0000586!1.89e-12!7;CL:0000133!2.16e-09!59;CL:0000540!2.37e-08!6;CL:0000031!2.37e-08!6;CL:0000404!2.37e-08!6;CL:0000221!1.84e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.32e-88;5!CL:0000039;5.52e-42;7!CL:0000586;5.52e-42;7!CL:0002321;8.62e-30;15!CL:0000148;8.80e-17;10!CL:0000540;6.12e-13;6!CL:0000404;6.12e-13;6!CL:0000147;3.51e-12;14!CL:0000710;1.04e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.01e-88,5;CL:0000039,5.24e-42,7;CL:0000586,5.24e-42,7;CL:0000148,8.57e-17,10;CL:0000541,8.57e-17,10;CL:0000540,6.90e-13,6;CL:0000031,6.90e-13,6;CL:0000404,6.90e-13,6;CL:0000147,3.45e-12,14;CL:0000047,6.63e-10,8;CL:0000710,1.03e-08,20;CL:0000133,2.03e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.47e-29;10!UBERON:0005564;1.47e-29;10!CL:0000031;6.12e-13;6 | |||
|ontology_enrichment_disease=DOID:3095!6.77e-08!22;DOID:2994!6.77e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.13e-13;22!DOID:2994;1.13e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.11e-13,22;DOID:2994,1.11e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.71e-11!8;UBERON:0003135!6.24e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.24e-37;8!UBERON:0003135;6.42e-27;11!UBERON:0000922;3.42e-18;49!UBERON:0000991;2.62e-14;21!UBERON:0003101;1.13e-13;22!UBERON:0000079;1.13e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.87e-37,8;UBERON:0003135,6.21e-27,11;UBERON:0000991,2.57e-14,21;UBERON:0009196,2.57e-14,21;UBERON:0009117,2.57e-14,21;UBERON:0005564,2.57e-14,21;UBERON:0004176,1.11e-13,22;UBERON:0003101,1.11e-13,22;UBERON:0000079,1.11e-13,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43947412259191,1.45782745153634,2.5562667431294,1.45125477021519,3.28017106138317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0.643012593860077,2.06309154895851,2.07720169014593,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,7.03722925219674,4.54269588951453,3.76769088092864,8.022641257356,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@ZSCAN2 | |||
}} |
Latest revision as of 12:40, 19 September 2015
Short description: | p4@ZSCAN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZSCAN2_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 28bp_to_uc010uox.1, uc010uoy.1, uc010uoz.1_5end |
EntrezGene: | ZSCAN2 |
HGNC: | 20994 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.01e-88 | 5 |
germ line cell | 5.24e-42 | 7 |
germ cell | 5.24e-42 | 7 |
melanocyte | 8.57e-17 | 10 |
melanoblast | 8.57e-17 | 10 |
neuron | 6.90e-13 | 6 |
neuroblast | 6.90e-13 | 6 |
electrically signaling cell | 6.90e-13 | 6 |
pigment cell | 3.45e-12 | 14 |
neuronal stem cell | 6.63e-10 | 8 |
neurecto-epithelial cell | 1.03e-08 | 20 |
neurectodermal cell | 2.03e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 7.87e-37 | 8 |
male reproductive organ | 6.21e-27 | 11 |
gonad | 2.57e-14 | 21 |
indifferent external genitalia | 2.57e-14 | 21 |
indifferent gonad | 2.57e-14 | 21 |
gonad primordium | 2.57e-14 | 21 |
external genitalia | 1.11e-13 | 22 |
male organism | 1.11e-13 | 22 |
male reproductive system | 1.11e-13 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.11e-13 | 22 |
germ cell cancer | 1.11e-13 | 22 |