FFCP PHASE1:Hg19::chr14:24099318..24099333,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10202 | |EntrezGene=10202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18349 | |HGNC=18349 | ||
|TSSclassifier=strong | |||
|UniProt=C9JZP6,Q59F08 | |UniProt=C9JZP6,Q59F08 | ||
|association_with_transcript=0bp_to_ENST00000432832,ENST00000553896,uc010aku.1_5end | |association_with_transcript=0bp_to_ENST00000432832,ENST00000553896,uc010aku.1_5end | ||
|cluster_id=chr14:24099318..24099333,+ | |||
|description=CAGE_peak_2_at_DHRS2_5end | |description=CAGE_peak_2_at_DHRS2_5end | ||
|id=chr14:24099318..24099333,+ | |id=chr14:24099318..24099333,+ | ||
|ontology_enrichment_celltype=CL:0000244!8.49e-11!4;CL:0000731!8.49e-11!4;CL:0000349!8.09e-09!3;CL:0002577!8.09e-09!3;CL:0002541!1.31e-08!3 | |ontology_enrichment_celltype=CL:0000244!8.49e-11!4;CL:0000731!8.49e-11!4;CL:0000349!8.09e-09!3;CL:0002577!8.09e-09!3;CL:0002541!1.31e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.80e-25;19!CL:0002577;2.35e-19;3!CL:0000244;2.74e-14;4!CL:0000731;2.74e-14;4!CL:0002536;5.70e-14;2!CL:0000840;1.89e-10;5!CL:0002541;2.01e-09;3!CL:0000990;4.14e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.70e-25,19;CL:0002577,2.14e-19,3;CL:0000244,2.74e-14,4;CL:0000731,2.74e-14,4;CL:0002536,5.88e-14,2;CL:0000840,1.86e-10,5;CL:0001029,1.86e-10,5;CL:0002541,1.97e-09,3;CL:0000990,4.10e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006298;7.03e-08;1!UBERON:0008801;1.22e-07;1!UBERON:0004874;2.46e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;3.07e-14;4!DOID:1612;3.07e-14;4!DOID:0060060;5.05e-08;1!DOID:0060061;5.05e-08;1!DOID:8691;5.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.74e-14,4;DOID:1612,2.74e-14,4;DOID:0060060,4.89e-08,1;DOID:0060061,4.89e-08,1;DOID:8691,4.89e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!6.73e-25!14;UBERON:0000158!6.73e-25!14;UBERON:0003124!6.19e-18!7;UBERON:0000478!3.17e-13!24;UBERON:0001987!5.01e-11!4;UBERON:0004340!5.01e-11!4;UBERON:0004175!8.63e-10!25;UBERON:0000305!2.18e-09!7;UBERON:0000365!1.27e-08!5;UBERON:0000476!1.31e-08!3;UBERON:0000920!1.31e-08!3;UBERON:0004871!3.75e-08!8;UBERON:0006947!1.24e-07!3;UBERON:0004054!1.24e-07!3;UBERON:0005910!3.62e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.92e-22;10!UBERON:0000158;1.92e-22;10!UBERON:0000478;7.23e-20;24!UBERON:0000305;7.85e-15;7!UBERON:0001987;1.16e-14;4!UBERON:0001829;7.86e-14;2!UBERON:0000365;1.53e-11;5!UBERON:0001044;3.77e-10;6!UBERON:0003293;3.77e-10;6!UBERON:0003294;3.77e-10;6!UBERON:0010047;3.77e-10;6!UBERON:0003408;3.77e-10;6!UBERON:0000167;3.77e-10;6!UBERON:0005910;1.06e-09;6!UBERON:0003124;2.01e-09;3!UBERON:0000920;2.01e-09;3!UBERON:0000996;4.42e-08;1!UBERON:0000077;4.69e-08;27!UBERON:0001736;7.03e-08;1!UBERON:0001831;1.22e-07;1!UBERON:0001567;1.22e-07;1!UBERON:0000989;2.46e-07;1!UBERON:0008811;2.46e-07;1!UBERON:0006554;6.90e-07;30!UBERON:0001008;6.90e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.19e-35,14;UBERON:0000158,4.19e-35,14;UBERON:0003124,2.44e-22,7;UBERON:0000478,6.91e-20,24;UBERON:0000305,7.85e-15,7;UBERON:0001987,1.08e-14,4;UBERON:0004340,1.08e-14,4;UBERON:0001829,8.12e-14,2;UBERON:0001008,9.36e-14,48;UBERON:0004871,5.36e-13,8;UBERON:0000365,1.53e-11,5;UBERON:0006554,1.68e-11,47;UBERON:0001044,3.83e-10,6;UBERON:0003293,3.83e-10,6;UBERON:0003294,3.83e-10,6;UBERON:0010047,3.83e-10,6;UBERON:0000167,3.83e-10,6;UBERON:0005910,1.06e-09,6;UBERON:0000920,1.97e-09,3;UBERON:0000996,4.57e-08,1;UBERON:0001736,7.26e-08,1;UBERON:0006298,7.26e-08,1;UBERON:0001831,1.22e-07,1;UBERON:0001567,1.22e-07,1;UBERON:0008801,1.22e-07,1;UBERON:0000077,1.82e-07,29;UBERON:0000989,1.91e-07,1;UBERON:0008811,1.91e-07,1;UBERON:0006258,1.91e-07,1;UBERON:0005876,1.91e-07,1;UBERON:0004874,1.91e-07,1;UBERON:0003975,6.02e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,24.2469923064491,10.0231451726812,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,48.6821090482025,47.0150290708022,10.9025527625469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902838299183157,0,0,0,0,0,0,0,0,0,0,5.75942385747893,1.66435439510497,19.9577593597589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29151611801369,1.68471475667626,6.65145230305014,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,3.58116727106535,12.7694812758035,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,22.1947662683101,0,0,0,0,0,4.16684417736373,0,0,0,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,7.65602783356607,0.457987967009312,11.72676507241,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,1.49730843868477,4.72091293214983,0,0,0,0,0,0,1.08599920350743,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.617602894321944,0.219284049578707,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,47.7969876093282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4319699090871,0,0,0,0,0,0,0,0,0,0,8.22386650285773,1.98484471355718,0,0,0,0,0,0,0.975726071789027,0,0,0,0,0,0,43.6421596248858,0.157115589916002,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,9.89522925286638,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7477127312031,0,0,0,0,0,0.0939839179798536,0.386747327841463,0,0,0,0,0,19.2666299029907,0,0,0,0,0.5290268405154,0.371995018166751,0,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,48.6002445155424,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,24.2469923064491,10.0231451726812,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,48.6821090482025,47.0150290708022,10.9025527625469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902838299183157,0,0,0,0,0,0,0,0,0,0,5.75942385747893,1.66435439510497,19.9577593597589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29151611801369,1.68471475667626,6.65145230305014,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,3.58116727106535,12.7694812758035,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,22.1947662683101,0,0,0,0,0,4.16684417736373,0,0,0,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,7.65602783356607,0.457987967009312,11.72676507241,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,1.49730843868477,4.72091293214983,0,0,0,0,0,0,1.08599920350743,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.617602894321944,0.219284049578707,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,47.7969876093282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4319699090871,0,0,0,0,0,0,0,0,0,0,8.22386650285773,1.98484471355718,0,0,0,0,0,0,0.975726071789027,0,0,0,0,0,0,43.6421596248858,0.157115589916002,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,9.89522925286638,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7477127312031,0,0,0,0,0,0.0939839179798536,0.386747327841463,0,0,0,0,0,19.2666299029907,0,0,0,0,0.5290268405154,0.371995018166751,0,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,48.6002445155424,0,0 | ||
|short_description=p2@DHRS2 | |short_description=p2@DHRS2 | ||
}} | }} |
Latest revision as of 12:37, 19 September 2015
Short description: | p2@DHRS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DHRS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000432832, ENST00000553896, uc010aku.1_5end |
EntrezGene: | DHRS2 |
HGNC: | 18349 |
UniProt: | C9JZP6Q59F08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.70e-25 | 19 |
placental epithelial cell | 2.14e-19 | 3 |
transitional epithelial cell | 2.74e-14 | 4 |
urothelial cell | 2.74e-14 | 4 |
amniotic epithelial cell | 5.88e-14 | 2 |
immature conventional dendritic cell | 1.86e-10 | 5 |
common dendritic progenitor | 1.86e-10 | 5 |
chorionic membrane mesenchymal stem cell | 1.97e-09 | 3 |
conventional dendritic cell | 4.10e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.19e-35 | 14 |
membranous layer | 4.19e-35 | 14 |
chorion | 2.44e-22 | 7 |
extraembryonic structure | 6.91e-20 | 24 |
amnion | 7.85e-15 | 7 |
placenta | 1.08e-14 | 4 |
allantois | 1.08e-14 | 4 |
major salivary gland | 8.12e-14 | 2 |
renal system | 9.36e-14 | 48 |
somatic layer of lateral plate mesoderm | 5.36e-13 | 8 |
urothelium | 1.53e-11 | 5 |
urinary system structure | 1.68e-11 | 47 |
saliva-secreting gland | 3.83e-10 | 6 |
gland of oral region | 3.83e-10 | 6 |
gland of foregut | 3.83e-10 | 6 |
oral gland | 3.83e-10 | 6 |
oral cavity | 3.83e-10 | 6 |
transitional epithelium | 1.06e-09 | 6 |
egg chorion | 1.97e-09 | 3 |
vagina | 4.57e-08 | 1 |
submandibular gland | 7.26e-08 | 1 |
submandibular gland primordium | 7.26e-08 | 1 |
parotid gland | 1.22e-07 | 1 |
cheek | 1.22e-07 | 1 |
parotid gland primordium | 1.22e-07 | 1 |
mixed endoderm/mesoderm-derived structure | 1.82e-07 | 29 |
penis | 1.91e-07 | 1 |
intromittent organ | 1.91e-07 | 1 |
lateral plate mesenchyme | 1.91e-07 | 1 |
undifferentiated genital tubercle | 1.91e-07 | 1 |
somatopleure | 1.91e-07 | 1 |
internal female genitalia | 6.02e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.74e-14 | 4 |
breast cancer | 2.74e-14 | 4 |
non-Hodgkin lymphoma | 4.89e-08 | 1 |
cutaneous T cell lymphoma | 4.89e-08 | 1 |
mycosis fungoides | 4.89e-08 | 1 |