FFCP PHASE1:Hg19::chrX:133371248..133371261,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347475 | |EntrezGene=347475 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37286 | |HGNC=37286 | ||
|TSSclassifier=strong | |||
|UniProt=A6NGH7 | |UniProt=A6NGH7 | ||
|association_with_transcript=171bp_to_ENST00000370809,ENST00000517294,NM_001101357,uc011mvj.1_5end | |association_with_transcript=171bp_to_ENST00000370809,ENST00000517294,NM_001101357,uc011mvj.1_5end | ||
|cluster_id=chrX:133371248..133371261,+ | |||
|coexpression_cluster_id=C112 | |coexpression_cluster_id=C112 | ||
|description=CAGE_peak_3_at_CCDC160_5end | |description=CAGE_peak_3_at_CCDC160_5end | ||
|id=chrX:133371248..133371261,+ | |id=chrX:133371248..133371261,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.76e-11!5;CL:0002605!5.25e-07!3 | |ontology_enrichment_celltype=CL:0002322!1.76e-11!5;CL:0002605!5.25e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002327;1.82e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.82e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;9.98e-30;1!UBERON:0006298;2.37e-29;1!UBERON:0005425;2.37e-29;1!UBERON:0003918;2.81e-12;10!UBERON:0007687;2.81e-12;10!UBERON:0006241;9.90e-11;3!UBERON:0003056;9.90e-11;3!UBERON:0003057;9.90e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;1.82e-08;4!DOID:1612;1.82e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.82e-08,4;DOID:1612,1.82e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.50e-35!82;UBERON:0001049!4.19e-34!57;UBERON:0005068!4.19e-34!57;UBERON:0006241!4.19e-34!57;UBERON:0007135!4.19e-34!57;UBERON:0005743!6.96e-33!86;UBERON:0007023!4.26e-31!115;UBERON:0000073!1.83e-30!94;UBERON:0001016!1.83e-30!94;UBERON:0003075!1.36e-29!86;UBERON:0007284!1.36e-29!86;UBERON:0002616!3.32e-28!59;UBERON:0002346!9.44e-28!90;UBERON:0000955!1.66e-25!69;UBERON:0006238!1.66e-25!69;UBERON:0002020!2.00e-24!34;UBERON:0003528!2.00e-24!34;UBERON:0001893!2.19e-24!34;UBERON:0002780!2.06e-23!41;UBERON:0001890!2.06e-23!41;UBERON:0006240!2.06e-23!41;UBERON:0002791!7.49e-23!33;UBERON:0003080!1.07e-22!42;UBERON:0000153!1.94e-22!129;UBERON:0007811!1.94e-22!129;UBERON:0000033!1.53e-21!123;UBERON:0001869!2.30e-21!32;UBERON:0004121!3.59e-21!169;UBERON:0000924!2.38e-20!173;UBERON:0006601!2.38e-20!173;UBERON:0003056!6.14e-19!61;UBERON:0000956!9.40e-16!25;UBERON:0000203!9.40e-16!25;UBERON:0003076!1.11e-12!15;UBERON:0003057!1.11e-12!15;UBERON:0002619!1.44e-11!22;UBERON:0001950!1.04e-10!20;UBERON:0002308!1.48e-10!9;UBERON:0000125!1.48e-10!9;UBERON:0004732!1.11e-09!13;UBERON:0002298!1.64e-09!8;UBERON:0000369!1.55e-08!4;UBERON:0002435!1.55e-08!4;UBERON:0000204!1.55e-08!4;UBERON:0010082!1.55e-08!4;UBERON:0000475!1.77e-08!365;UBERON:0004733!5.27e-08!12;UBERON:0002028!5.27e-08!12;UBERON:0007277!5.27e-08!12;UBERON:0002420!5.45e-08!9;UBERON:0007245!5.45e-08!9;UBERON:0010009!5.45e-08!9;UBERON:0010011!5.45e-08!9;UBERON:0000454!5.45e-08!9;UBERON:0009663!2.29e-07!7;UBERON:0004111!2.63e-07!241;UBERON:0002240!2.75e-07!3;UBERON:0005383!4.01e-07!3;UBERON:0005382!4.01e-07!3;UBERON:0000988!4.54e-07!3;UBERON:0006331!4.73e-07!3;UBERON:0002771!9.49e-07!3 | |ontology_enrichment_uberon=UBERON:0001017!4.50e-35!82;UBERON:0001049!4.19e-34!57;UBERON:0005068!4.19e-34!57;UBERON:0006241!4.19e-34!57;UBERON:0007135!4.19e-34!57;UBERON:0005743!6.96e-33!86;UBERON:0007023!4.26e-31!115;UBERON:0000073!1.83e-30!94;UBERON:0001016!1.83e-30!94;UBERON:0003075!1.36e-29!86;UBERON:0007284!1.36e-29!86;UBERON:0002616!3.32e-28!59;UBERON:0002346!9.44e-28!90;UBERON:0000955!1.66e-25!69;UBERON:0006238!1.66e-25!69;UBERON:0002020!2.00e-24!34;UBERON:0003528!2.00e-24!34;UBERON:0001893!2.19e-24!34;UBERON:0002780!2.06e-23!41;UBERON:0001890!2.06e-23!41;UBERON:0006240!2.06e-23!41;UBERON:0002791!7.49e-23!33;UBERON:0003080!1.07e-22!42;UBERON:0000153!1.94e-22!129;UBERON:0007811!1.94e-22!129;UBERON:0000033!1.53e-21!123;UBERON:0001869!2.30e-21!32;UBERON:0004121!3.59e-21!169;UBERON:0000924!2.38e-20!173;UBERON:0006601!2.38e-20!173;UBERON:0003056!6.14e-19!61;UBERON:0000956!9.40e-16!25;UBERON:0000203!9.40e-16!25;UBERON:0003076!1.11e-12!15;UBERON:0003057!1.11e-12!15;UBERON:0002619!1.44e-11!22;UBERON:0001950!1.04e-10!20;UBERON:0002308!1.48e-10!9;UBERON:0000125!1.48e-10!9;UBERON:0004732!1.11e-09!13;UBERON:0002298!1.64e-09!8;UBERON:0000369!1.55e-08!4;UBERON:0002435!1.55e-08!4;UBERON:0000204!1.55e-08!4;UBERON:0010082!1.55e-08!4;UBERON:0000475!1.77e-08!365;UBERON:0004733!5.27e-08!12;UBERON:0002028!5.27e-08!12;UBERON:0007277!5.27e-08!12;UBERON:0002420!5.45e-08!9;UBERON:0007245!5.45e-08!9;UBERON:0010009!5.45e-08!9;UBERON:0010011!5.45e-08!9;UBERON:0000454!5.45e-08!9;UBERON:0009663!2.29e-07!7;UBERON:0004111!2.63e-07!241;UBERON:0002240!2.75e-07!3;UBERON:0005383!4.01e-07!3;UBERON:0005382!4.01e-07!3;UBERON:0000988!4.54e-07!3;UBERON:0006331!4.73e-07!3;UBERON:0002771!9.49e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001736;2.37e-29;1!UBERON:0000941;2.37e-29;1!UBERON:0001785;2.37e-29;1!UBERON:0002464;2.37e-29;1!UBERON:0004904;2.37e-29;1!UBERON:0001021;2.37e-29;1!UBERON:0003714;2.05e-15;2!UBERON:0005162;2.05e-15;2!UBERON:0000122;2.05e-15;2!UBERON:0001829;2.05e-15;2!UBERON:0002240;9.90e-11;3!UBERON:0005174;9.90e-11;3!UBERON:0001137;9.90e-11;3!UBERON:0000489;1.81e-09;29!UBERON:0001041;4.04e-09;14!UBERON:0001911;1.82e-08;4!UBERON:0000945;4.79e-07;5!UBERON:0010039;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.33e-29,1;UBERON:0001785,1.33e-29,1;UBERON:0002464,1.33e-29,1;UBERON:0004904,1.33e-29,1;UBERON:0001021,1.33e-29,1;UBERON:0003902,1.33e-29,1;UBERON:0005425,1.33e-29,1;UBERON:0001736,2.37e-29,1;UBERON:0006298,2.37e-29,1;UBERON:0003714,1.54e-15,2;UBERON:0005162,1.54e-15,2;UBERON:0000122,1.54e-15,2;UBERON:0001829,2.05e-15,2;UBERON:0002240,1.09e-10,3;UBERON:0005174,1.09e-10,3;UBERON:0001137,1.09e-10,3;UBERON:0000489,7.07e-09,31;UBERON:0001911,1.82e-08,4;UBERON:0005333,1.82e-08,4;UBERON:0008425,1.82e-08,4;UBERON:0005311,1.82e-08,4;UBERON:0001781,1.96e-08,4 | |||
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| ||
|short_description=p3@CCDC160 | |short_description=p3@CCDC160 | ||
}} | }} |
Latest revision as of 12:36, 19 September 2015
Short description: | p3@CCDC160 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC160_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | 171bp_to_ENST00000370809, ENST00000517294, NM_001101357, uc011mvj.1_5end |
EntrezGene: | CCDC160 |
HGNC: | 37286 |
UniProt: | A6NGH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.33e-29 | 1 |
cranial nerve | 1.33e-29 | 1 |
nerve trunk | 1.33e-29 | 1 |
nerve connecting eye with brain | 1.33e-29 | 1 |
nerve | 1.33e-29 | 1 |
retinal neural layer | 1.33e-29 | 1 |
presumptive neural retina | 1.33e-29 | 1 |
submandibular gland | 2.37e-29 | 1 |
submandibular gland primordium | 2.37e-29 | 1 |
neural tissue | 1.54e-15 | 2 |
multi cell component structure | 1.54e-15 | 2 |
neuron projection bundle | 1.54e-15 | 2 |
major salivary gland | 2.05e-15 | 2 |
spinal cord | 1.09e-10 | 3 |
dorsal region element | 1.09e-10 | 3 |
dorsum | 1.09e-10 | 3 |
cavitated compound organ | 7.07e-09 | 31 |
mammary gland | 1.82e-08 | 4 |
mammary bud | 1.82e-08 | 4 |
mammary ridge | 1.82e-08 | 4 |
mammary placode | 1.82e-08 | 4 |
layer of retina | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.82e-08 | 4 |
breast cancer | 1.82e-08 | 4 |