FFCP PHASE1:Hg19::chrX:133119632..133119649,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:133119632..133119649,-
|short_description=p3@GPC3
|description=CAGE_peak_3_at_GPC3_5end
|association_with_transcript=16bp_to_uc004exe.1,uc010nrn.1,uc010nro...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2719 | |EntrezGene=2719 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4451 | |HGNC=4451 | ||
|TSSclassifier=strong | |||
|UniProt=P51654,Q2L880,Q2L882 | |UniProt=P51654,Q2L880,Q2L882 | ||
|association_with_transcript=16bp_to_uc004exe.1,uc010nrn.1,uc010nro.1,uc010nrp.1,uc011mvh.1_5end | |||
|cluster_id=chrX:133119632..133119649,- | |||
|description=CAGE_peak_3_at_GPC3_5end | |||
|id=chrX:133119632..133119649,- | |||
|ontology_enrichment_celltype=CL:0000325!8.22e-08!39;CL:0000136!1.40e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.33e-09;13!CL:0002322;9.52e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.69e-07,15;CL:0002322,9.61e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.11e-12;31!UBERON:0009117;2.90e-07;10!UBERON:0005564;2.90e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.05e-18!115;UBERON:0000481!5.54e-08!347;UBERON:0000062!1.35e-07!511;UBERON:0000468!5.80e-07!659;UBERON:0000064!7.73e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.31e-13;49!UBERON:0003135;4.14e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.16e-13,114;UBERON:0001007,1.04e-07,145;UBERON:0001555,1.04e-07,145;UBERON:0007026,1.04e-07,145;UBERON:0003135,3.03e-07,11 | |||
|phase1_expression=9.08391896352783,9.20632252731228,8.73917305395021,1.0007329835313,6.25745532198203,0.872338524100369,7.59899634504932,0.631719873426831,15.4099520637905,0.737201809504527,0,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,7.1215416725395,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2917915447673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.822189523018381,0.276350017785848,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,4.85877735005415,0,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0.175669571386252,4.25681995367566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732806975721629,0,0,0,0,0,0,0.286836620748814,1.77334191099179,1.12135520028461,0,0,1.24484414159907,0,0.163461903113459,1.05950199351452,0,0.468642863667593,0,0,0,1.76151747965647,1.78060238804945,1.26405726032024,0.204154171254893,0.245668634623536,0.103325781175765,2.37600571456411,10.1379441004208,0,0,1.85169725349473,3.25308151667107,0,4.38977620880838,1.22595118319608,9.16452159330241,0.113432183160021,0,1.06778694409284,0,0,0,0,0,0,0,0,0,8.40559495457822,0,0,0,0,0,0,23.1750041646231,27.036072737583,24.8655037740769,37.5253019155641,25.9890476401897,44.8922151663271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,2.36315962672562,0,44.6448031911502,0,0.219500570817251,0,0,0.462942225792648,1.95484983186195,0,0,2.20267769452646,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0,0,0.383382679165211,0.492663237895943,0,0,0.144119953416961,0.25248486685276,0,0.381988425558278,0,11.9750712215894,0.205654985406647,0,0.285826432630578,0.336393253036082,0.87192013766656,0,0.258543431515556,3.57656445851882,0,0,0,0,0,0,1.85871391755592,4.88359444852299,1.64648067356154,0.325736184293735,0.710783897485092,0,0,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,1.54657762555539,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0.157702415033935,0,0.601892199455438,0,6.2083842775503,0,0,0.347534457872331,0,0,0,0,0,0.303127571446259,0,8.46692821323105,2.48107807818777,2.14846762603287,6.17452207752762,1.66580894032411,0,0.482561763430822,0,0,0.177561725313127,0,0,0,33.8406458856542,0,0.0920809889358963,0,0,0,2.25599806453706,4.08181286653398,0.784349769176855,0,0.422206515571503,0,0,0,0,0.812839312631559,0,0,0.831076008928724,0.223874754722178,0,0,2.3080511260475,1.31205858279882,1.30151357865721,31.4275085525553,0.824125183365091,1.73269949833235,0,0,0,0.096670718292122,0.308097234229289,1.38153307253517,0.827019434907183,0.429680979473094,0.290033387828457,0.170453254832202,0.534192213880424,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0.767693373934002,0.855877976067841,0,0,0.359744915166629,0.823611089208164,0.235624804691373,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,1.31178950409327,0,0.6196469961995,0,0.143411352204052,0.196498082026242,0,0,0,0,0.75894634753143,0,0,0.670302275535787,0,31.8206046625514,0,0,0,0,0,0,0,0,0,0,0,0,41.2340914552046,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,5.53600108997424,0,7.68101910771145,13.8679186893298,9.34355193586688,0,0,0,0.270455678475983,0,0,0,35.7479957423421,2.91265252198832,0,0,1.43246690842614,16.9269868074604,0.921482106297696,0,0.140669416410513,0,0,0.422250816255987,5.77819165928102,5.52567831062295,27.4606695161161,0,0,1.24415835064723,0,0,1.02314474045374,11.1467048369735,0,0,0,0.278304294485554,1.99613798001194,0,0,54.3749681576095,3.30001000027949,0,0.236387681767936,31.3716469649733,0,0.173624994933292,0.885741385813839,0.120596438625408,1.52581736317083,0.331737779793674,0.591095237907095,1.53569778007781,0.10893846351899,6.69233972537296,6.84857300683794,0.113942055847001,0,0,0.760531603454056,2.23300811812344,0.641183153813036,5.33034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,29.9668511439955,6.05888191277855,7.96209544862804,4.77670848318032,25.6632660872123,0,0,0,0.539209063845416,46.5495035433297,0.702793337176017,0,0.19566461893209,0,1.97292201424695,27.8278646911927,1.83643656978294,1.26373159256976,2.40517471063188,6.73973244082106,1.99396161812156,0.330991955875499,0.627865836814451,0,0,0,0,0,0.0870592065804026,5.76598005198699,0,0,0,0,3.78257164304836,21.2697265326516,14.9147288915151,0,0,0.253243183823515,1.17330829640882,0,16.0089746054514,0.39961921916426,0.576361668616424,10.1937570587665,0,0,0.248505071130865,0,0,0,0,0,1.20084057741958,0,0,0,0,7.26134243307861,6.87481272035051,12.9217144423827,0.399358000997982,0.858452096273142,7.14148663813992,13.9069788047523,0,50.0932582968051,60.1903512827189,54.1472189564264,57.5626264514739,0,0,0,0,13.6640176195266,15.4044168988902,12.8786504789047,0,0,0.121499113316049,0,7.01370794962864,64.1519612891027,0,0,0,12.8645158747206,2.64836788146173,0,0,0,0,0,1.55975789423744,0,0,1.31897010310274,1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| 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| ||
|short_description=p3@GPC3 | |||
}} | }} |
Latest revision as of 12:18, 19 September 2015
Short description: | p3@GPC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_uc004exe.1, uc010nrn.1, uc010nro.1, uc010nrp.1, uc011mvh.1_5end |
EntrezGene: | GPC3 |
HGNC: | 4451 |
UniProt: | P51654Q2L880Q2L882 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.69e-07 | 15 |
embryonic stem cell | 9.61e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.16e-13 | 114 |
digestive system | 1.04e-07 | 145 |
digestive tract | 1.04e-07 | 145 |
primitive gut | 1.04e-07 | 145 |
male reproductive organ | 3.03e-07 | 11 |