FFCP PHASE1:Hg19::chr3:69812701..69812729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4286 | |EntrezGene=4286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |HGNC=7105 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFN0,B4DJL2,O75030 | |UniProt=E9PFN0,B4DJL2,O75030 | ||
|association_with_transcript=0bp_to_ENST00000472437,NM_001184967,uc011bgb.1_5end | |association_with_transcript=0bp_to_ENST00000472437,NM_001184967,uc011bgb.1_5end | ||
|cluster_id=chr3:69812701..69812729,+ | |||
|coexpression_cluster_id=C276 | |coexpression_cluster_id=C276 | ||
|description=CAGE_peak_9_at_MITF_5end | |description=CAGE_peak_9_at_MITF_5end | ||
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|ontology_enrichment_celltype=CL:1000497!1.31e-20!18;CL:0002518!1.31e-20!18;CL:1000507!3.81e-17!12;CL:1000494!3.81e-17!12;CL:1000449!1.34e-15!16;CL:0002150!5.50e-10!3;CL:0000861!5.50e-10!3;CL:0002681!1.43e-08!13;CL:0002584!1.43e-08!13 | |ontology_enrichment_celltype=CL:1000497!1.31e-20!18;CL:0002518!1.31e-20!18;CL:1000507!3.81e-17!12;CL:1000494!3.81e-17!12;CL:1000449!1.34e-15!16;CL:0002150!5.50e-10!3;CL:0000861!5.50e-10!3;CL:0002681!1.43e-08!13;CL:0002584!1.43e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.71e-21;10!CL:1000494;1.71e-21;10!CL:1000497;1.65e-19;17!CL:0002518;1.65e-19;17!CL:1000449;1.92e-14;15 | |ontology_enrichment_celltype_v019=CL:1000507;1.71e-21;10!CL:1000494;1.71e-21;10!CL:1000497;1.65e-19;17!CL:0002518;1.65e-19;17!CL:1000449;1.92e-14;15 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.50e-21,10;CL:1000494,1.50e-21,10;CL:1000497,1.47e-19,17;CL:0002518,1.47e-19,17;CL:1000449,1.76e-14,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060084!6.77e-11!3;DOID:127!6.77e-11!3;DOID:0060072!2.91e-08!4 | |ontology_enrichment_disease=DOID:0060084!6.77e-11!3;DOID:127!6.77e-11!3;DOID:0060072!2.91e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:4468;5.19e-08;2 | |ontology_enrichment_disease_v019=DOID:4468;5.19e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,4.38e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!3.93e-21!27;UBERON:0003918!3.93e-21!27;UBERON:0005095!3.93e-21!27;UBERON:0007687!3.93e-21!27;UBERON:0000489!2.79e-17!32;UBERON:0009773!3.81e-17!12;UBERON:0001231!3.81e-17!12;UBERON:0004810!3.81e-17!12;UBERON:0004211!1.34e-15!16;UBERON:0001285!1.34e-15!16;UBERON:0007684!1.34e-15!16;UBERON:0003220!1.34e-15!16;UBERON:0004208!1.34e-15!16;UBERON:0006554!2.08e-15!44;UBERON:0001008!5.61e-15!45;UBERON:0006555!1.42e-14!17;UBERON:0005103!1.42e-14!17;UBERON:0000083!1.42e-14!17;UBERON:0009201!1.42e-14!17;UBERON:0004819!1.42e-14!17;UBERON:0006553!1.42e-14!17;UBERON:0003074!1.42e-14!17;UBERON:0003060!1.42e-14!17;UBERON:0000080!1.16e-13!18;UBERON:0002120!1.16e-13!18;UBERON:0004875!1.16e-13!18;UBERON:0005721!1.16e-13!18;UBERON:0005754!1.16e-13!18;UBERON:0007297!1.16e-13!18;UBERON:0005795!2.38e-13!22;UBERON:0005172!5.13e-13!55;UBERON:0005173!5.13e-13!55;UBERON:0004876!4.09e-12!20;UBERON:0004175!1.74e-11!25;UBERON:0003887!1.88e-11!21;UBERON:0000995!1.96e-11!21;UBERON:0002417!2.51e-11!61;UBERON:0000916!2.51e-11!61;UBERON:0000058!5.59e-11!26;UBERON:0003975!7.82e-11!22;UBERON:0003064!1.37e-08!37;UBERON:0001225!1.43e-08!13;UBERON:0008987!1.43e-08!13;UBERON:0005177!5.24e-08!107;UBERON:0000062!9.07e-08!511;UBERON:0001876!1.05e-07!2;UBERON:0005156!1.40e-07!59;UBERON:0000990!1.40e-07!59;UBERON:0009569!2.47e-07!113;UBERON:0003133!3.11e-07!48;UBERON:0001851!7.91e-07!16 | |ontology_enrichment_uberon=UBERON:0002113!3.93e-21!27;UBERON:0003918!3.93e-21!27;UBERON:0005095!3.93e-21!27;UBERON:0007687!3.93e-21!27;UBERON:0000489!2.79e-17!32;UBERON:0009773!3.81e-17!12;UBERON:0001231!3.81e-17!12;UBERON:0004810!3.81e-17!12;UBERON:0004211!1.34e-15!16;UBERON:0001285!1.34e-15!16;UBERON:0007684!1.34e-15!16;UBERON:0003220!1.34e-15!16;UBERON:0004208!1.34e-15!16;UBERON:0006554!2.08e-15!44;UBERON:0001008!5.61e-15!45;UBERON:0006555!1.42e-14!17;UBERON:0005103!1.42e-14!17;UBERON:0000083!1.42e-14!17;UBERON:0009201!1.42e-14!17;UBERON:0004819!1.42e-14!17;UBERON:0006553!1.42e-14!17;UBERON:0003074!1.42e-14!17;UBERON:0003060!1.42e-14!17;UBERON:0000080!1.16e-13!18;UBERON:0002120!1.16e-13!18;UBERON:0004875!1.16e-13!18;UBERON:0005721!1.16e-13!18;UBERON:0005754!1.16e-13!18;UBERON:0007297!1.16e-13!18;UBERON:0005795!2.38e-13!22;UBERON:0005172!5.13e-13!55;UBERON:0005173!5.13e-13!55;UBERON:0004876!4.09e-12!20;UBERON:0004175!1.74e-11!25;UBERON:0003887!1.88e-11!21;UBERON:0000995!1.96e-11!21;UBERON:0002417!2.51e-11!61;UBERON:0000916!2.51e-11!61;UBERON:0000058!5.59e-11!26;UBERON:0003975!7.82e-11!22;UBERON:0003064!1.37e-08!37;UBERON:0001225!1.43e-08!13;UBERON:0008987!1.43e-08!13;UBERON:0005177!5.24e-08!107;UBERON:0000062!9.07e-08!511;UBERON:0001876!1.05e-07!2;UBERON:0005156!1.40e-07!59;UBERON:0000990!1.40e-07!59;UBERON:0009569!2.47e-07!113;UBERON:0003133!3.11e-07!48;UBERON:0001851!7.91e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.71e-21;10!UBERON:0009773;1.71e-21;10!UBERON:0001231;1.71e-21;10!UBERON:0004810;1.71e-21;10!UBERON:0002113;1.22e-19;24!UBERON:0011143;1.22e-19;24!UBERON:0000489;3.24e-16;29!UBERON:0006554;1.15e-15;30!UBERON:0001008;1.15e-15;30!UBERON:0006834;5.42e-15;1!UBERON:0006555;1.92e-14;15!UBERON:0004819;1.92e-14;15!UBERON:0001285;1.92e-14;15!UBERON:0007684;1.92e-14;15!UBERON:0000995;9.40e-13;17!UBERON:0003975;4.64e-12;18!UBERON:0004175;2.25e-10;21!UBERON:0003103;6.17e-07;61 | |ontology_enrichment_uberon_v019=UBERON:0004211;1.71e-21;10!UBERON:0009773;1.71e-21;10!UBERON:0001231;1.71e-21;10!UBERON:0004810;1.71e-21;10!UBERON:0002113;1.22e-19;24!UBERON:0011143;1.22e-19;24!UBERON:0000489;3.24e-16;29!UBERON:0006554;1.15e-15;30!UBERON:0001008;1.15e-15;30!UBERON:0006834;5.42e-15;1!UBERON:0006555;1.92e-14;15!UBERON:0004819;1.92e-14;15!UBERON:0001285;1.92e-14;15!UBERON:0007684;1.92e-14;15!UBERON:0000995;9.40e-13;17!UBERON:0003975;4.64e-12;18!UBERON:0004175;2.25e-10;21!UBERON:0003103;6.17e-07;61 | ||
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| ||
|short_description=p9@MITF | |short_description=p9@MITF | ||
}} | }} |
Latest revision as of 12:10, 19 September 2015
Short description: | p9@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MITF_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | 0bp_to_ENST00000472437, NM_001184967, uc011bgb.1_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | E9PFN0B4DJL2O75030 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.50e-21 | 10 |
nephron tubule epithelial cell | 1.50e-21 | 10 |
kidney cell | 1.47e-19 | 17 |
kidney epithelial cell | 1.47e-19 | 17 |
epithelial cell of nephron | 1.76e-14 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.50e-21 | 10 |
kidney | 4.17e-18 | 26 |
kidney mesenchyme | 4.17e-18 | 26 |
upper urinary tract | 4.17e-18 | 26 |
kidney rudiment | 4.17e-18 | 26 |
kidney field | 4.17e-18 | 26 |
cavitated compound organ | 3.79e-15 | 31 |
uterus or analog | 5.42e-15 | 1 |
nephron epithelium | 1.76e-14 | 15 |
renal tubule | 1.76e-14 | 15 |
nephron tubule | 1.76e-14 | 15 |
nephron | 1.76e-14 | 15 |
uriniferous tubule | 1.76e-14 | 15 |
nephrogenic mesenchyme | 1.76e-14 | 15 |
excretory tube | 1.35e-13 | 16 |
kidney epithelium | 1.35e-13 | 16 |
uterus | 2.33e-10 | 21 |
embryonic uterus | 6.72e-10 | 22 |
internal female genitalia | 6.72e-10 | 22 |
urinary system structure | 6.82e-10 | 47 |
renal system | 1.11e-09 | 48 |
internal genitalia | 9.73e-09 | 25 |
abdomen element | 1.44e-08 | 54 |
abdominal segment element | 1.44e-08 | 54 |
abdominal segment of trunk | 1.12e-07 | 60 |
abdomen | 1.12e-07 | 60 |
compound organ | 9.93e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.38e-08 | 2 |