FFCP PHASE1:Hg19::chr1:19578097..19578114,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:19578097..19578114,+ to FFCP PHASE1:Hg19::chr1:19578097..19578114,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51154 | |EntrezGene=51154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18477 | |HGNC=18477 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKD2 | |UniProt=Q9UKD2 | ||
|association_with_transcript=22bp_to_NM_016183,uc001bbs.2_5end | |||
|cluster_id=chr1:19578097..19578114,+ | |||
|description=CAGE_peak_3_at_MRTO4_5end | |||
|id=chr1:19578097..19578114,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.99e-12!254;CL:0000548!1.69e-07!679;CL:0000004!1.69e-07!679;CL:0000255!1.69e-07!679;CL:0000012!2.73e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000235;7.16e-09;6!CL:0000188;2.95e-08;9!CL:0001014;1.48e-07;2!CL:0001016;1.48e-07;2!CL:1000449;7.01e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,9.92e-09,6;CL:0000188,3.89e-08,9;CL:0001014,8.14e-08,2;CL:0001016,8.14e-08,2;CL:1000449,6.89e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.52e-20!235;DOID:14566!6.45e-20!239;DOID:0050687!1.26e-13!143;DOID:305!1.69e-13!106;DOID:0050686!3.89e-09!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;8.94e-09;24!UBERON:0011143;8.94e-09;24!UBERON:0000489;5.62e-07;29!UBERON:0006555;7.01e-07;15!UBERON:0004819;7.01e-07;15!UBERON:0001285;7.01e-07;15!UBERON:0007684;7.01e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.93e-08,26;UBERON:0003918,2.93e-08,26;UBERON:0011143,2.93e-08,26;UBERON:0005095,2.93e-08,26;UBERON:0007687,2.93e-08,26;UBERON:0004211,6.89e-07,15;UBERON:0009773,6.89e-07,15;UBERON:0001231,6.89e-07,15;UBERON:0001285,6.89e-07,15;UBERON:0007684,6.89e-07,15;UBERON:0004208,6.89e-07,15 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0.982935746006035,3.48900583986214,0.218441372130172,0,0,0,0,0,0,0,0.61560529038394,0.816002764977012,0.626909442956176,0,0,0.376627918784408,0.305653622991805,0.57470412614962,0.393553906568396,0,0,0,0.919421224478927,1.204823675113,0.369754010166788,0.154934401160603,0.568676929949686,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0.283604451492204,0.221729397462564,0.175669571386252,0.130979075497713,0,0.370784442784429,0,0.522389211897802,0.797747763113191,0.238490624305342,0,0.371457501329565,0.596287222100115,0.860234595106124,0,0.56530794192401,0.419499436209906,0.550236083880135,0.417989933073621,0.258416759169329,0.35576626268671,0,0.805658634218294,0,0,0.367663080345869,0,0.446498641420399,0.898117490504679,0.563057402416611,0,0.949265659568129,1.28241220751285,0,0,0.872188104285069,0,0.25326102332916,0.264818361626438,0.573673241497627,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0.653847612453835,0.454072282934794,0.576175924479999,0,0,0,0.298897361103602,0.23486899728753,0.647491777472526,1.26405726032024,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0.718618141816238,0.336672227908132,0.125118519871964,0,0.438977620880838,0,0,0.113432183160021,0.538168907066586,0,0.211931901159562,0.600182192168805,0.206105058476878,0.257640540045629,0,0.337552664482532,0.194874010322397,0.504867548488229,0.0920498986422993,0.323292113637624,0.355009592516614,0.10075209822764,0.67824236924195,0.193260853163297,0.272746120590835,0,0.731842236777572,0.927708378250397,0.348581828608555,0.10366105501537,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0,0,0.591534000199219,0.842923450390509,0.964044119533928,0.882351781859152,0.871517776369625,1.42362371466658,1.34831308160164,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0.658501712451753,0,0.402115889646523,0.0925884451585296,0,2.07986957055916,0,0.115930404975077,0.117408694235822,0.288732895522148,0.462985512576611,0.190254152234598,0.790204397959275,0,0,1.40402559083543,1.0404181360211,0,0.16798212819886,0.141775097242386,0.358234090811393,0,0.383382679165211,0,0,0,0,0,0.190493682876507,0,0,0,0.925447434329912,0.300343057843917,0,0.672786506072164,1.30788020649984,0.51336800074665,0.129271715757778,0,2.535908257668,0.26593811658487,0,1.02882949704857,1.41849132023278,0.532844358032199,0.142977993658148,0,0,2.28015329005615,0,1.58390374586686,0.602878754119172,0,0,2.43247561282381,0,2.10833939483032,0.479249710983165,0,1.42636905040718,0.434343920002738,0,0.179060963239896,0.112085143993527,0,0,0.128343036279748,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0.535286966391485,0,0.35142424497814,0,0,0,0.664225598535437,0.553107505625109,0.260650843404249,0.391602314925481,0.343143423810856,0,0,0,1.21251028578504,0,0,0,0,0,0.128139149255701,0,0,1.48418066444991,0.925258162815933,1.42049380250502,0.574890092096664,0.519254429183621,1.16210378459959,0.966875596732978,0,0.736647911487171,0.34444334449382,0.728364672026868,0,0,0.308061348417659,1.56869953835371,1.46139224653261,0.105551628892876,0,0.850468526382578,1.0795795805107,1.54227252690289,0.270946437543853,0.501689773854853,1.01950509218015,0,0,0,0,0.512900250232778,0,0,0,1.09883357782012,0.82509499920588,0,0.650060246036521,0,0.193341436584244,1.84858340537573,1.07452572308291,1.10269257987624,0,0.145016693914229,1.10794615640931,0.267096106940212,0.330569830721956,0.576570202095319,0.127612712494584,0.2023155617111,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0.632758849437452,0.190630193923825,0.767693373934002,0,0.318203247925937,0,0.179872457583315,0,0.471249609382746,0.808729926293264,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.282810863907425,0,0,1.32687795048244,0,0,0,0.608731130888112,0.6196469961995,0.563391205064483,0,0,0,0.354761064070598,0.211107635297664,0,1.13841952129715,0,0.48111056362756,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.735120647943095,0.185803175125719,0.577076851905779,0.213425530045242,0.637705090915289,0.199579371432817,0,0,0.324621940274555,0.280797178113459,0.456469358066384,1.25343916618419,0,0.338583555603207,0.642352300414798,0.201799707191048,0,0.343505344755765,0.614481528616916,0.447352215784832,0.834245708559542,1.56310476321632,0.556812347790485,0,0.811367035427949,0.99921590399346,0,0.748562161632879,0.293016358543788,0.36408156524854,0.111443384277478,0.284136146806413,0,0,0,0,0.140669416410513,0,1.6480387422676,0.211125408127993,0,0,0,0.102268682502155,0.369254416383208,0,0.629078458031288,0.895105873378046,1.02314474045374,0.09864340563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| ||
|short_description=p3@MRTO4 | |||
}} | }} |
Latest revision as of 12:08, 19 September 2015
Short description: | p3@MRTO4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MRTO4_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_NM_016183, uc001bbs.2_5end |
EntrezGene: | MRTO4 |
HGNC: | 18477 |
UniProt: | Q9UKD2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 9.92e-09 | 6 |
cell of skeletal muscle | 3.89e-08 | 9 |
CD1a-positive Langerhans cell | 8.14e-08 | 2 |
immature CD1a-positive Langerhans cell | 8.14e-08 | 2 |
epithelial cell of nephron | 6.89e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
kidney | 2.93e-08 | 26 |
kidney mesenchyme | 2.93e-08 | 26 |
upper urinary tract | 2.93e-08 | 26 |
kidney rudiment | 2.93e-08 | 26 |
kidney field | 2.93e-08 | 26 |
nephron epithelium | 6.89e-07 | 15 |
renal tubule | 6.89e-07 | 15 |
nephron tubule | 6.89e-07 | 15 |
nephron | 6.89e-07 | 15 |
uriniferous tubule | 6.89e-07 | 15 |
nephrogenic mesenchyme | 6.89e-07 | 15 |