FFCP PHASE1:Hg19::chr11:65640071..65640085,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:65640071..65640085,-
|short_description=p9@EFEMP2
|description=CAGE_peak_9_at_EFEMP2_5end
|association_with_transcript=39bp_to_ENST00000526624_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=30008 | |EntrezGene=30008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3219 | |HGNC=3219 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKA3 | |UniProt=E9PKA3 | ||
|association_with_transcript=39bp_to_ENST00000526624_5end | |||
|cluster_id=chr11:65640071..65640085,- | |||
|description=CAGE_peak_9_at_EFEMP2_5end | |||
|id=chr11:65640071..65640085,- | |||
|ontology_enrichment_celltype=CL:0000055!5.30e-31!180;CL:0000680!7.78e-21!57;CL:0000056!7.78e-21!57;CL:0000355!7.78e-21!57;CL:0000057!3.57e-20!75;CL:0000183!2.68e-19!59;CL:0000187!5.31e-19!54;CL:0000359!7.57e-19!32;CL:0000192!1.12e-18!42;CL:0000514!1.12e-18!42;CL:0000222!3.99e-18!119;CL:0000393!4.56e-15!60;CL:0000211!4.56e-15!60;CL:0000048!8.87e-11!430;CL:0000723!4.42e-10!436;CL:0000136!2.06e-09!15;CL:0000034!6.35e-09!444;CL:0002620!4.00e-08!23;CL:0002334!1.15e-07!12;CL:0002494!8.16e-07!16;CL:0002539!9.57e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.46e-19;32!CL:0000192;6.21e-15;43!CL:0000136;1.68e-14;13!CL:0000187;2.10e-09;55!CL:0002595;2.41e-08;5!CL:0000134;7.78e-08;55!CL:0002334;1.04e-07;12!CL:0000393;1.90e-07;61!CL:0000211;1.90e-07;61!CL:0002539;1.92e-07;10!CL:0002620;2.19e-07;23!CL:0002559;4.56e-07;5!CL:0000057;6.10e-07;73!CL:0000048;6.10e-07;58!CL:0002320;7.00e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.45e-22,427;CL:0000723,1.60e-21,433;CL:0000359,4.30e-21,32;CL:0000034,1.78e-20,441;CL:0000192,2.74e-20,43;CL:0000514,2.74e-20,43;CL:0000680,9.20e-19,58;CL:0000056,9.20e-19,58;CL:0000355,9.20e-19,58;CL:0000057,9.63e-18,76;CL:0000187,3.62e-16,55;CL:0000136,7.54e-16,15;CL:0000393,1.32e-13,61;CL:0000211,1.32e-13,61;CL:0000222,1.26e-10,121;CL:0002320,8.82e-10,361;CL:0000134,4.23e-09,354;CL:0002595,1.81e-08,5;CL:0002334,8.41e-08,12;CL:0002539,1.25e-07,10;CL:0002620,1.65e-07,23;CL:0002559,3.41e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;6.21e-15;43!CL:0000355;2.51e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.48e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.09e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.99e-23!83;UBERON:0002329!1.99e-23!83;UBERON:0003077!1.99e-23!83;UBERON:0003059!1.99e-23!83;UBERON:0007282!1.99e-23!83;UBERON:0009618!1.99e-23!83;UBERON:0007285!1.99e-23!83;UBERON:0004290!2.88e-21!70;UBERON:0002385!5.05e-19!63;UBERON:0001015!5.05e-19!63;UBERON:0000383!5.05e-19!63;UBERON:0001134!8.64e-19!61;UBERON:0002036!8.64e-19!61;UBERON:0003082!8.64e-19!61;UBERON:0004872!2.64e-18!84;UBERON:0001637!1.21e-17!42;UBERON:0003509!1.21e-17!42;UBERON:0004572!1.21e-17!42;UBERON:0002049!1.44e-17!79;UBERON:0007798!1.44e-17!79;UBERON:0000486!2.12e-16!82;UBERON:0000055!2.13e-16!69;UBERON:0001981!3.56e-16!60;UBERON:0007500!3.56e-16!60;UBERON:0004537!3.56e-16!60;UBERON:0006965!3.56e-16!60;UBERON:0004573!1.46e-15!33;UBERON:0004571!1.46e-15!33;UBERON:0005256!1.13e-14!143;UBERON:0001009!2.51e-14!113;UBERON:0004535!9.92e-14!110;UBERON:0000475!5.61e-11!365;UBERON:0002100!9.28e-11!216;UBERON:0003914!1.40e-10!118;UBERON:0000490!2.31e-10!138;UBERON:0003102!6.33e-08!95;UBERON:0000947!1.14e-07!21;UBERON:0010191!1.14e-07!21;UBERON:0007100!6.63e-07!27;UBERON:0000477!8.55e-07!286;UBERON:0004237!9.57e-07!10;UBERON:0004695!9.57e-07!10;UBERON:0002111!9.57e-07!10;UBERON:0004178!9.57e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.40e-14;33!UBERON:0004571;2.40e-14;33!UBERON:0001637;6.40e-11;42!UBERON:0003509;6.40e-11;42!UBERON:0004572;6.40e-11;42!UBERON:0004457;2.96e-09;9!UBERON:0000042;2.96e-09;9!UBERON:0003688;3.72e-09;6!UBERON:0002358;3.72e-09;6!UBERON:0003684;3.72e-09;6!UBERON:0001178;3.72e-09;6!UBERON:0003834;2.41e-08;5!UBERON:0001533;2.41e-08;5!UBERON:0003513;1.33e-07;7!UBERON:0007500;1.78e-07;56!UBERON:0001981;1.78e-07;56!UBERON:0004537;1.78e-07;56!UBERON:0004237;1.92e-07;10!UBERON:0004695;1.92e-07;10!UBERON:0002111;1.92e-07;10!UBERON:0004178;1.92e-07;10!UBERON:0002384;3.51e-07;198!UBERON:0002073;4.56e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.21e-19,73;UBERON:0002329,4.48e-19,71;UBERON:0003059,4.48e-19,71;UBERON:0007282,4.48e-19,71;UBERON:0004290,4.48e-19,71;UBERON:0009618,4.48e-19,71;UBERON:0003077,1.24e-18,72;UBERON:0007285,1.24e-18,72;UBERON:0007503,2.53e-18,78;UBERON:0001637,7.78e-17,42;UBERON:0003509,7.78e-17,42;UBERON:0004572,7.78e-17,42;UBERON:0001134,7.85e-17,62;UBERON:0002036,7.85e-17,62;UBERON:0003082,7.85e-17,62;UBERON:0004573,1.25e-16,33;UBERON:0004571,1.25e-16,33;UBERON:0000486,1.97e-16,83;UBERON:0002385,5.81e-16,64;UBERON:0001015,5.81e-16,64;UBERON:0000383,5.81e-16,64;UBERON:0005256,1.60e-12,122;UBERON:0004872,1.75e-12,83;UBERON:0007500,2.78e-12,59;UBERON:0001981,2.78e-12,59;UBERON:0004537,2.78e-12,59;UBERON:0006965,2.78e-12,59;UBERON:0000055,3.70e-11,68;UBERON:0003104,8.09e-11,160;UBERON:0009142,8.09e-11,160;UBERON:0002049,6.49e-10,78;UBERON:0007798,6.49e-10,78;UBERON:0002384,1.18e-09,371;UBERON:0003688,3.66e-09,6;UBERON:0002358,3.66e-09,6;UBERON:0003684,3.66e-09,6;UBERON:0001178,3.66e-09,6;UBERON:0002199,7.04e-09,46;UBERON:0002416,7.04e-09,46;UBERON:0004535,1.51e-08,109;UBERON:0000926,1.70e-08,315;UBERON:0004120,1.70e-08,315;UBERON:0006603,1.70e-08,315;UBERON:0003834,1.81e-08,5;UBERON:0001533,1.81e-08,5;UBERON:0001009,4.83e-08,112;UBERON:0002100,6.69e-08,199;UBERON:0003914,7.07e-08,117;UBERON:0003513,1.12e-07,7;UBERON:0004237,1.25e-07,10;UBERON:0004695,1.25e-07,10;UBERON:0002111,1.25e-07,10;UBERON:0004178,1.25e-07,10;UBERON:0002097,1.44e-07,41;UBERON:0003102,1.47e-07,99;UBERON:0000490,1.50e-07,148;UBERON:0002073,3.41e-07,5;UBERON:0005086,3.41e-07,5 | |||
|phase1_expression=2.54349730978779,2.78330681058278,4.65149533516705,4.00293193412522,3.12872766099101,5.23403114460221,0,3.79031924056099,1.30592814099919,0.737201809504527,2.09340350391728,0.436882744260345,0,0.866364470720326,1.98838425436749,1.34465029290355,0.602694528023977,2.19093027116212,1.95173119516203,0.123121058076788,0,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.639312809217652,2.53007406669196,2.00535164254356,2.02785126545153,0.795285947051099,0.973269740605272,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0,0.275118041940067,0.208994966536811,0,0.71153252537342,0,0,1.52054421143703,0.976248230192678,0,0.81014194788176,0.535798369704479,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0.993943903390637,1.13967460498122,1.45650098894541,0.860509862246441,2.12801029319014,1.12135520028461,1.06748995729705,3.20667812942308,0,0.269421344139376,0.163461903113459,0.454072282934794,0,0.70296429550139,1.5608003841516,1.71141546463335,0.448346041655403,0.23486899728753,0.161872944368132,0,0.816616685019573,0.122834317311768,0.619954687054593,5.94001428641027,2.47266929278557,1.82032272387605,0.718618141816238,0.336672227908132,0,1.10825646193673,1.75591048352335,2.45190236639216,2.55404700141215,0.794025282120147,0.358779271377724,1.49490172172997,2.96704661623387,1.50045548042201,2.06105058476878,0.772921620136887,1.8611685633159,0.337552664482532,3.02054715999716,0.504867548488229,2.48534726334208,1.61646056818812,1.06502877754984,2.72030665214629,1.3564847384839,0,0,0,0,0,0,0,0,0,1.56449532329816,10.935095949279,2.76269842704961,1.39310378409594,3.60939740834793,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0.651616610620649,2.07986957055916,0,0.115930404975077,0.352226082707465,0.721832238805369,0.462985512576611,1.14152491340759,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0,0,0,0,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,2.19761916788222,3.57656445851882,0,1.06375246633948,2.08014873822732,0.257207374262142,0,0.532844358032199,0.142977993658148,1.08524321078289,1.64648067356154,0.325736184293735,1.06617584622764,0,2.1100756394171,6.10073421020206,1.69954085009497,0,0,0,1.67737398844108,0,1.42636905040718,3.04040744001916,2.4657158706046,1.61154866915906,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.613457458595699,2.00068208423871,0,1.03985430765404,1.60586089917446,1.41932173530541,1.63997980989798,5.41702979509894,2.27407504055985,0,0,1.10621501125022,1.99832313276591,1.17480694477644,0,0,0,0,0.303127571446259,0,0,1.98486246255021,0.61384789315225,2.24528075546459,2.56278298511402,2.04682899626681,2.57366273829772,4.45254199334973,0.925258162815933,1.9531789784444,0.574890092096664,1.03850885836724,2.09178681227927,0,0.200506470303285,0.276242966807689,1.60740227430449,0.728364672026868,1.83574180943194,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,1.08378575017541,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,3.21367859688319,0.48335359146061,0,0,0.275673144969061,0.107420244868274,0.145016693914229,0.170453254832202,0.534192213880424,0.330569830721956,0,0.127612712494584,0.10115778085555,7.43752878875657,1.88887408098384,0.6970372701606,1.23213432070436,3.19383618190213,2.60979897622522,2.7798632865588,2.14687330112987,1.116475108079,0.316379424718726,0.953150969619124,1.27948895655667,0.42793898803392,2.54562598340749,2.35484592059769,0.899362287916574,0,0.235624804691373,3.03273722359974,4.75530963519025,1.26377536871694,0,2.68084838594413,3.16950440270266,1.50149902548784,1.55545975149084,2.26016233240486,3.85955740482287,8.62470667813585,6.57676327880644,2.31510213706675,0,2.23201414658974,1.54911749049875,0.845086807596724,0.860468113224309,0.491245205065606,1.78335525740625,1.06428319221179,1.47775344708365,1.64647446479951,0.379473173765715,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.593929361665277,0.614321404198464,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0.398495976502139,0.276283915531148,0,0.818149460017238,0,5.59871257791253,0,0,0.511572370226872,0.197286811273867,0,1.11136990144637,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.638002319463839,0.549585560411174,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0.789168805698781,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.7759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| ||
|short_description=p9@EFEMP2 | |||
}} | }} |
Latest revision as of 11:46, 19 September 2015
Short description: | p9@EFEMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_EFEMP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000526624_5end |
EntrezGene: | EFEMP2 |
HGNC: | 3219 |
UniProt: | E9PKA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.45e-22 | 427 |
somatic stem cell | 1.60e-21 | 433 |
vascular associated smooth muscle cell | 4.30e-21 | 32 |
stem cell | 1.78e-20 | 441 |
smooth muscle cell | 2.74e-20 | 43 |
smooth muscle myoblast | 2.74e-20 | 43 |
muscle precursor cell | 9.20e-19 | 58 |
myoblast | 9.20e-19 | 58 |
multi-potent skeletal muscle stem cell | 9.20e-19 | 58 |
fibroblast | 9.63e-18 | 76 |
muscle cell | 3.62e-16 | 55 |
fat cell | 7.54e-16 | 15 |
electrically responsive cell | 1.32e-13 | 61 |
electrically active cell | 1.32e-13 | 61 |
mesodermal cell | 1.26e-10 | 121 |
connective tissue cell | 8.82e-10 | 361 |
mesenchymal cell | 4.23e-09 | 354 |
smooth muscle cell of the subclavian artery | 1.81e-08 | 5 |
preadipocyte | 8.41e-08 | 12 |
aortic smooth muscle cell | 1.25e-07 | 10 |
skin fibroblast | 1.65e-07 | 23 |
hair follicle cell | 3.41e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.09e-07 | 14 |