FFCP PHASE1:Hg19::chr1:84609965..84610025,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:84609965..84610025,+ to FFCP PHASE1:Hg19::chr1:84609965..84610025,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5567 | |EntrezGene=5567 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9381 | |HGNC=9381 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000470673_5end | |||
|cluster_id=chr1:84609965..84610025,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_PRKACB_5end | |||
|id=chr1:84609965..84610025,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.46e-48!172;CL:0000566!1.46e-48!172;CL:0002032!6.44e-45!165;CL:0000837!6.44e-45!165;CL:0000988!8.23e-44!182;CL:0000738!1.76e-40!140;CL:0002031!1.38e-35!124;CL:0002087!5.85e-34!119;CL:0000763!1.43e-25!112;CL:0000049!1.43e-25!112;CL:0000766!1.67e-18!76;CL:0000557!3.70e-18!71;CL:0000542!1.43e-17!53;CL:0000051!1.43e-17!53;CL:0000839!2.13e-17!70;CL:0000838!3.26e-17!52;CL:0002009!2.38e-15!65;CL:0002194!8.19e-15!63;CL:0000576!8.19e-15!63;CL:0000040!8.19e-15!63;CL:0000559!8.19e-15!63;CL:0000791!3.39e-12!18;CL:0000789!3.39e-12!18;CL:0002420!3.39e-12!18;CL:0002419!3.39e-12!18;CL:0000790!3.39e-12!18;CL:0000084!7.17e-12!25;CL:0000827!7.17e-12!25;CL:0002057!1.32e-10!42;CL:0000860!1.10e-08!45;CL:0000625!1.64e-08!11;CL:0000236!2.44e-08!14;CL:0002139!5.52e-08!24;CL:0000071!7.05e-07!18;CL:0002546!7.05e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.10e-13;18!CL:0000789;1.10e-13;18!CL:0002419;1.10e-13;18!CL:0000084;1.59e-12;25!CL:0000542;4.92e-12;53!CL:0000738;1.46e-10;136!CL:0002087;1.61e-10;104!CL:0000766;2.64e-10;69!CL:0000763;4.83e-10;100!CL:0000576;7.04e-10;48!CL:0000625;1.77e-09;11!CL:0000473;2.02e-09;39!CL:0000234;2.02e-09;39!CL:0000988;4.12e-09;177!CL:0000236;4.13e-09;13!CL:0002139;5.43e-08;24!CL:0000860;6.09e-08;33!CL:0002057;6.09e-08;33!CL:0000071;3.95e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.81e-59,168;CL:0002032,6.78e-55,161;CL:0000837,6.78e-55,161;CL:0000988,1.40e-52,177;CL:0000738,6.28e-49,136;CL:0002031,3.93e-43,120;CL:0002087,2.88e-41,115;CL:0000763,4.58e-33,108;CL:0000049,4.58e-33,108;CL:0000766,3.28e-24,72;CL:0000557,9.81e-24,67;CL:0000839,8.38e-23,66;CL:0002009,2.35e-20,61;CL:0002194,9.81e-20,59;CL:0000576,9.81e-20,59;CL:0000040,9.81e-20,59;CL:0000559,9.81e-20,59;CL:0000542,4.19e-19,53;CL:0000051,4.19e-19,53;CL:0000838,1.06e-18,52;CL:0000473,3.08e-15,48;CL:0000234,3.08e-15,48;CL:0000791,1.13e-13,18;CL:0000789,1.13e-13,18;CL:0002420,1.13e-13,18;CL:0002419,1.13e-13,18;CL:0000790,1.13e-13,18;CL:0000084,1.48e-12,25;CL:0000827,1.48e-12,25;CL:0000860,7.29e-12,42;CL:0002057,7.29e-12,42;CL:0000625,1.77e-09,11;CL:0000236,2.77e-09,14;CL:0002139,6.55e-08,24;CL:0000071,3.88e-07,18;CL:0002546,3.88e-07,18;CL:0000115,6.02e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000790;1.10e-13;18!CL:0000051;4.92e-12;53!CL:0000049;1.76e-09;108!CL:0002057;8.66e-09;42!CL:0002546;3.95e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!1.08e-09!51;DOID:0060083!1.08e-09!51;DOID:1240!5.49e-09!39;DOID:8692!3.23e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.31e-08;31!DOID:1240;3.81e-08;39!DOID:2531;3.98e-07;51!DOID:0060083;3.98e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.56e-11,51;DOID:0060083,8.56e-11,51;DOID:1240,1.77e-10,39;DOID:8692,8.34e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.40e-24!112;UBERON:0002390!1.74e-23!102;UBERON:0003061!1.74e-23!102;UBERON:0002371!4.39e-16!80;UBERON:0007023!1.05e-14!115;UBERON:0001474!5.77e-14!86;UBERON:0002405!3.13e-13!115;UBERON:0003081!1.67e-11!216;UBERON:0004765!5.92e-11!101;UBERON:0001434!5.92e-11!101;UBERON:0001986!7.05e-07!18;UBERON:0004638!7.05e-07!18;UBERON:0004852!7.05e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.95e-07;18!UBERON:0001986;3.95e-07;18!UBERON:0004852;3.95e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.16e-29,108;UBERON:0002390,6.19e-29,98;UBERON:0003061,6.19e-29,98;UBERON:0002405,1.30e-24,93;UBERON:0002371,2.75e-21,76;UBERON:0001474,2.52e-18,82;UBERON:0004765,6.78e-16,90;UBERON:0003081,2.38e-14,203;UBERON:0007023,5.82e-14,114;UBERON:0001434,1.18e-12,100;UBERON:0004638,3.88e-07,18;UBERON:0001986,3.88e-07,18;UBERON:0004852,3.88e-07,18 | |||
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| ||
|short_description=p2@PRKACB | |||
}} | }} |
Latest revision as of 11:18, 19 September 2015
Short description: | p2@PRKACB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRKACB_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000470673_5end |
EntrezGene: | PRKACB |
HGNC: | 9381 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.16e-29 | 108 |
hematopoietic system | 6.19e-29 | 98 |
blood island | 6.19e-29 | 98 |
immune system | 1.30e-24 | 93 |
bone marrow | 2.75e-21 | 76 |
bone element | 2.52e-18 | 82 |
skeletal element | 6.78e-16 | 90 |
lateral plate mesoderm | 2.38e-14 | 203 |
adult organism | 5.82e-14 | 114 |
skeletal system | 1.18e-12 | 100 |
blood vessel endothelium | 3.88e-07 | 18 |
endothelium | 3.88e-07 | 18 |
cardiovascular system endothelium | 3.88e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.56e-11 | 51 |
immune system cancer | 8.56e-11 | 51 |
leukemia | 1.77e-10 | 39 |
myeloid leukemia | 8.34e-09 | 31 |