FFCP PHASE1:Hg19::chr12:569091..569155,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283358 | |EntrezGene=283358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24137 | |HGNC=24137 | ||
|TSSclassifier=strong | |||
|UniProt=Q6L9W6 | |UniProt=Q6L9W6 | ||
|association_with_transcript=-374bp_to_ENST00000266383_5end | |association_with_transcript=-374bp_to_ENST00000266383_5end | ||
|cluster_id=chr12:569091..569155,+ | |||
|description=CAGE_peak_1_at_B4GALNT3_5end | |description=CAGE_peak_1_at_B4GALNT3_5end | ||
|id=chr12:569091..569155,+ | |id=chr12:569091..569155,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.16e-12!254;CL:0002076!1.64e-12!43;CL:0000223!4.14e-10!59;CL:0002251!5.63e-08!21;CL:0002159!4.54e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.16e-12!254;CL:0002076!1.64e-12!43;CL:0000223!4.14e-10!59;CL:0002251!5.63e-08!21;CL:0002159!4.54e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.43e-14;42!CL:0002251;4.48e-13;20!CL:0000039;4.79e-10;7!CL:0000586;4.79e-10;7!CL:0002159;8.41e-09;14!CL:0000240;1.10e-07;6!CL:0000311;1.10e-07;6!CL:0000079;1.10e-07;6!CL:0000237;1.10e-07;6!CL:0000312;7.62e-07;5 | |ontology_enrichment_celltype_v019=CL:0002076;5.43e-14;42!CL:0002251;4.48e-13;20!CL:0000039;4.79e-10;7!CL:0000586;4.79e-10;7!CL:0002159;8.41e-09;14!CL:0000240;1.10e-07;6!CL:0000311;1.10e-07;6!CL:0000079;1.10e-07;6!CL:0000237;1.10e-07;6!CL:0000312;7.62e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.39e-18,42;CL:0000066,4.37e-15,253;CL:0002251,7.73e-13,20;CL:0000223,1.36e-12,58;CL:0000039,4.73e-10,7;CL:0000586,4.73e-10,7;CL:0002159,6.32e-09,14;CL:0000240,1.20e-07,6;CL:0000311,1.20e-07,6;CL:0000079,1.20e-07,6;CL:0000237,1.20e-07,6;CL:0000036,1.20e-07,6;CL:0000357,1.20e-07,6;CL:0000114,1.20e-07,6;CL:0000312,8.85e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.55e-08;10!UBERON:0005564;6.55e-08;10!CL:0000357;1.10e-07;6!CL:0000114;1.10e-07;6!CL:0000223;2.63e-07;58 | |ontology_enrichment_development_v019=UBERON:0009117;6.55e-08;10!UBERON:0005564;6.55e-08;10!CL:0000357;1.10e-07;6!CL:0000114;1.10e-07;6!CL:0000223;2.63e-07;58 | ||
|ontology_enrichment_disease=DOID:0050687!2.75e-16!143;DOID:305!8.68e-16!106;DOID:299!1.79e-09!25;DOID:162!2.05e-08!235;DOID:14566!1.42e-07!239 | |ontology_enrichment_disease=DOID:0050687!2.75e-16!143;DOID:305!8.68e-16!106;DOID:299!1.79e-09!25;DOID:162!2.05e-08!235;DOID:14566!1.42e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:299;3.42e-10;25!DOID:3095;2.26e-08;22!DOID:2994;2.26e-08;22!DOID:305;6.03e-08;106 | |ontology_enrichment_disease_v019=DOID:299;3.42e-10;25!DOID:3095;2.26e-08;22!DOID:2994;2.26e-08;22!DOID:305;6.03e-08;106 | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.30e-16,143;DOID:305,2.03e-15,106;DOID:299,1.88e-10,25;DOID:3095,2.11e-08,22;DOID:2994,2.11e-08,22;DOID:162,3.51e-08,235;DOID:14566,1.19e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.56e-10!115;UBERON:0000464!1.56e-09!104;UBERON:0001007!1.21e-07!155;UBERON:0001555!1.21e-07!155;UBERON:0007026!1.21e-07!155;UBERON:0004921!1.45e-07!129;UBERON:0004185!1.45e-07!129;UBERON:0000466!1.85e-07!126;UBERON:0004119!3.62e-07!169;UBERON:0000925!3.62e-07!169;UBERON:0006595!3.62e-07!169;UBERON:0000924!7.40e-07!173;UBERON:0006601!7.40e-07!173;UBERON:0004121!9.09e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!8.56e-10!115;UBERON:0000464!1.56e-09!104;UBERON:0001007!1.21e-07!155;UBERON:0001555!1.21e-07!155;UBERON:0007026!1.21e-07!155;UBERON:0004921!1.45e-07!129;UBERON:0004185!1.45e-07!129;UBERON:0000466!1.85e-07!126;UBERON:0004119!3.62e-07!169;UBERON:0000925!3.62e-07!169;UBERON:0006595!3.62e-07!169;UBERON:0000924!7.40e-07!173;UBERON:0006601!7.40e-07!173;UBERON:0004121!9.09e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.47e-09;33!UBERON:0000922;1.63e-07;49!UBERON:0001555;8.57e-07;54!UBERON:0001041;9.33e-07;14 | |ontology_enrichment_uberon_v019=UBERON:0004921;1.47e-09;33!UBERON:0000922;1.63e-07;49!UBERON:0001555;8.57e-07;54!UBERON:0001041;9.33e-07;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,9.35e-08,145;UBERON:0001555,9.35e-08,145;UBERON:0007026,9.35e-08,145;UBERON:0004119,3.36e-07,160;UBERON:0000925,3.36e-07,160;UBERON:0006595,3.36e-07,160;UBERON:0004921,8.61e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0.515151135268373,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.393010762749165,0.205601498999509,0.334372990781356,0.977766799900771,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0.535081656179426,0,0.453237370790265,0.383220493601921,0.34362744548263,0.506039384039006,0.637130828648193,0,0,0.602300476311091,0.255973222308837,0,0.473554504088034,0,0.80642697289893,0.534880391567015,0.434473211648397,0,0,0.12786256184353,0,0,0,0.795285947051099,4.86634870302636,0,0,0.263504357079378,1.5062593682237,2.5500670180478,3.33705998505986,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0,0,0,0,0,0,2.12586938479627,3.54569956768085,2.58124135850103,3.90315859614705,2.78312513475119,2.67246068599892,1.45125477021519,2.01856680700503,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82873408649161,0,3.62175941848464,1.1240175325762,3.31745608958382,2.4998880192803,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0.246217006087397,0,0,2.81201501960331,3.35964256397719,2.97727704209012,0.0895585227028483,0,0.383382679165211,0,0,0.829312462163088,0,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0.837581326671744,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0.426910231213777,0.606255142892519,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,3.98836183652353,0.601519410909855,4.78821142466661,0,0,0,3.60959690325929,1.5403067420883,3.13739907670742,0,2.32213583564327,1.13733384070897,0,0,0,0.270946437543853,0.501689773854853,2.54876273045038,3.3243040357149,2.46262230194396,0,0,0.512900250232778,0.328014645699706,0.650756789328606,0.618246069886334,0.640986253728404,1.07262349896764,0.574265537996172,1.30012049207304,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.165284915360978,1.15314040419064,3.31793052485919,2.12431339796655,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,1.15466535270614,2.68120910214315,0,0.376575203107117,0,0,0.443430153536676,0,0.507447609232169,0.764637207142375,0,0,0,0,0.540031437238115,0,0.640944426764839,0.962479855263359,5.14584453560167,0.185803175125719,0.865615277858669,0,0.797131363644112,0,0,0,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0.425846237690326,1.03051603426729,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,3.7428108081644,0,0.606802608747567,0,0,6.92359005739301,1.18785872333055,3.68592842519078,0,0.140669416410513,0,0,2.74463030566391,2.78947183551498,0.552567831062295,6.55025144421118,0.613612095012929,0,0,2.87578723671446,1.61119057208048,0,0.591860433821602,0,0,0,0.185536196323703,0,3.1251331330228,1.22443999994674,0,0.910347586283997,3.30529745380596,0.472775363535873,7.23961083807076,2.33283690706603,0.347249989866585,0,1.32656082487949,0,0,0.295547618953547,0.219385397153973,0,5.43752602686553,1.38510465306835,0.113942055847001,12.9115786457314,7.89867270805995,8.1485528941506,0.638002319463839,0.457987967009312,0.533034776018635,0,0.784901281975124,0,0,0,0,0,0,2.3209787098083,3.59112177950125,7.49171278599886,1.94749775767882,5.97157158647103,2.4768118060935,3.66618086960175,2.07564790076435,1.35920332841153,0.939797545549098,0.269604531922708,0,0,0,0.391329237864179,0,0.394584402849391,1.20990716048664,1.53036380815245,0.505492637027904,2.55549813004637,0.933193722575224,0.664653872707185,0.992975867626496,0.313932918407225,1.19472429772959,3.9845336444171,0,12.6698608984646,0.783939179315021,0.261177619741208,0.873633341210151,1.20390222730132,0,0,0,2.13375836274523,0,0.677942222341597,0.274083849293502,0,0.316553979779393,4.88878456837007,2.24444696704294,3.20179492109029,0.999048047910651,6.19588793762656,0,2.74551996579143,0.14405479798815,0.372757606696298,3.53541051925193,0.815425236441684,0.627617077873999,0,0.866851769704557,0,0.136905378891993,0,0,0,1.95497680890578,2.29160424011684,2.15361907373044,6.58940701646671,6.86761677018513,2.4548860318606,14.1085292222125,0,0,0.86661500537946,0.329663433524666,0.808842526250219,1.18112977817699,0,1.59045937961861,0.408610218334727,2.41129722697529,2.33817042215297,2.49264202817511,1.5748172408605,3.86900977278975,0.364497339948148,6.03782437678679,1.10327990218877,3.19972987623488,9.29282961370777,0,0.767660789277781,2.1440859791201,2.64836788146173,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0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| ||
|short_description=p1@B4GALNT3 | |short_description=p1@B4GALNT3 | ||
}} | }} |
Latest revision as of 11:14, 19 September 2015
Short description: | p1@B4GALNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_B4GALNT3_5end |
Coexpression cluster: | NA |
Association with transcript: | -374bp_to_ENST00000266383_5end |
EntrezGene: | B4GALNT3 |
HGNC: | 24137 |
UniProt: | Q6L9W6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.39e-18 | 42 |
epithelial cell | 4.37e-15 | 253 |
epithelial cell of alimentary canal | 7.73e-13 | 20 |
endodermal cell | 1.36e-12 | 58 |
germ line cell | 4.73e-10 | 7 |
germ cell | 4.73e-10 | 7 |
general ecto-epithelial cell | 6.32e-09 | 14 |
stratified squamous epithelial cell | 1.20e-07 | 6 |
keratin accumulating cell | 1.20e-07 | 6 |
stratified epithelial cell | 1.20e-07 | 6 |
keratinizing barrier epithelial cell | 1.20e-07 | 6 |
epithelial fate stem cell | 1.20e-07 | 6 |
stratified epithelial stem cell | 1.20e-07 | 6 |
surface ectodermal cell | 1.20e-07 | 6 |
keratinocyte | 8.85e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
digestive system | 9.35e-08 | 145 |
digestive tract | 9.35e-08 | 145 |
primitive gut | 9.35e-08 | 145 |
endoderm-derived structure | 3.36e-07 | 160 |
endoderm | 3.36e-07 | 160 |
presumptive endoderm | 3.36e-07 | 160 |
subdivision of digestive tract | 8.61e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.30e-16 | 143 |
carcinoma | 2.03e-15 | 106 |
adenocarcinoma | 1.88e-10 | 25 |
germ cell and embryonal cancer | 2.11e-08 | 22 |
germ cell cancer | 2.11e-08 | 22 |
cancer | 3.51e-08 | 235 |
disease of cellular proliferation | 1.19e-07 | 239 |