FFCP PHASE1:Hg19::chr7:73483434..73483454,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2006 | |EntrezGene=2006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3327 | |HGNC=3327 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=323bp_to_M26867_5end | |association_with_transcript=323bp_to_M26867_5end | ||
|cluster_id=chr7:73483434..73483454,+ | |||
|coexpression_cluster_id=C379 | |||
|description=CAGE_peak_5_at_ELN_5end | |description=CAGE_peak_5_at_ELN_5end | ||
|id=chr7:73483434..73483454,+ | |id=chr7:73483434..73483454,+ | ||
|ontology_enrichment_celltype=CL:0000057!4.01e-13!75;CL:0000055!2.35e-11!180;CL:0002620!1.78e-09!23;CL:0000136!4.07e-07!15 | |ontology_enrichment_celltype=CL:0000057!4.01e-13!75;CL:0000055!2.35e-11!180;CL:0002620!1.78e-09!23;CL:0000136!4.07e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000153;3.72e-12;9!CL:0000447;3.72e-12;9!CL:0002334;7.50e-10;12!CL:0002620;9.60e-10;23!CL:0000138;1.49e-09;6!CL:0000136;2.02e-09;13!CL:0002615;4.50e-09;3!CL:0002580;5.97e-09;3!CL:0000327;9.55e-09;15!CL:0002579;1.85e-08;3!CL:0000135;2.04e-08;3!CL:0000388;2.04e-08;3!CL:0000499;4.85e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.81e-17,76;CL:0000153,3.45e-12,9;CL:0000447,3.45e-12,9;CL:0000136,5.27e-10,15;CL:0002334,7.47e-10,12;CL:0002620,9.73e-10,23;CL:0000058,1.35e-09,6;CL:0000138,1.35e-09,6;CL:0002615,4.52e-09,3;CL:0002580,5.99e-09,3;CL:0000327,8.55e-09,15;CL:0000135,1.81e-08,3;CL:0002579,1.81e-08,3;CL:0000388,1.81e-08,3;CL:0000499,4.32e-08,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!9.30e-10!12;UBERON:0000042!9.30e-10!12;UBERON:0003688!7.89e-09!6;UBERON:0002358!7.89e-09!6;UBERON:0003684!7.89e-09!6;UBERON:0001178!7.89e-09!6;UBERON:0002199!5.79e-07!45;UBERON:0002416!5.79e-07!45;UBERON:0007023!8.01e-07!115;UBERON:0002097!9.90e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.16e-18;9!UBERON:0000042;8.16e-18;9!UBERON:0003688;7.78e-16;6!UBERON:0002358;7.78e-16;6!UBERON:0003684;7.78e-16;6!UBERON:0001178;7.78e-16;6!UBERON:0007846;2.04e-08;3!UBERON:0000043;2.04e-08;3!UBERON:0007845;2.04e-08;3!UBERON:0001443;2.47e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.63e-16,6;UBERON:0002358,7.63e-16,6;UBERON:0003684,7.63e-16,6;UBERON:0001178,7.63e-16,6;UBERON:0004457,6.24e-13,12;UBERON:0000042,6.24e-13,12;UBERON:0007846,1.81e-08,3;UBERON:0000043,1.81e-08,3;UBERON:0007845,1.81e-08,3;UBERON:0001443,2.45e-08,11;UBERON:0002199,7.16e-08,46;UBERON:0002416,7.16e-08,46;UBERON:0002097,7.37e-08,41 | |||
|phase1_expression=13.4442000660212,52.2405278293999,26.6403823741386,39.0285863577209,39.3325763096013,21.8084631025092,7.59899634504932,0,0.522371256399677,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.940364164434263,0,0.273748850145768,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2889311810753,2.00535164254356,3.62116297402059,1.5905718941022,1.45990461090791,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,2.5326102332916,0,2.29469296599051,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,4.94533858557114,0,0,0,0,0,1.31693286264251,9.19463387397059,7.51190294532984,0,7.71375433462106,1.92201649936711,0.635795703478686,1.50045548042201,0.412210116953756,5.15281080091258,2.60563598864226,1.18143432568886,4.18979122193154,1.26216887122057,0.828449087780694,0.646584227275248,4.61512470271599,3.62707553619505,1.18692414617341,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,6.43240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31324739884849,4.59447743336456,0,1.01346914667305,0.410952645100767,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,1.45579603071565,2.49800584316026,2.20783381047509,0,0.601892199455438,2.27407504055985,0,1.99267679560631,0.368738337083406,0,0,1.02943027143257,0,0,0,0,0,0,13.8940372378515,12.276957863045,45.4669352981579,5.38184426873944,17.9097537173346,5.79074116116987,4.45254199334973,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79515087581472,0.328014645699706,1.95227036798582,0.515205058238611,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0.979352392114111,0,0,0,0,0,0.31481234683064,0,0,0,0,0.9266210955196,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46228093778771,0,0,0,0,0,2.65375590096488,2.63070531152258,0,0,0,0.30982349809975,0,0,0,0,0,4.43326034125095,8.56166721695745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0.994147647766298,0.140669416410513,0,0,0,5.57894367102995,0.276283915531148,0,0,0,6.22079175323615,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,3.05163472634166,0.221158519862449,0,0.219385397153973,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.202203398942031,6.42062117839031,0,0,0,0,0,6.04953580243319,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.678923115418936,0,5.42353777873278,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0.687481272035051,0,0.599037001496973,0,0,3.56072404179649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.472091293214983,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0.533937062838473,6.28817220398664,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60066635191569,1.03018711554838,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0.107824811396682,0,0.436838552768056,0,0,0.123935764259002,0,0.318004350653419,0,0,1.41070377476274,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0.156986185701028,0.157115589916002,0,0,0.215927591218621,0,0.357382720883282,0,0,0,0.801711364730253,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,4.85710993059139,0,0.198950775161368,0,0,0,0,0.0771741581079447,1.74847648403166,0,0.245148321753905,0,0,0,6.339835913751,3.56846940844415,0.375935671919414,0.709036767709349,0,0,0,0,1.46067277649303,0.917458566809082,0.143339583151451,0,0,0.436350690340377,0,9.29987545416878,2.77305377178851,22.0639546683132,0,0.218531143927391,0,0,0.26721740526556,0,0,0.682008283964155,0,0,0,0.852935927603924,2.3806443146374,0,0.186224142887574,0,0.12729431655633,1.0105859447911,0.653150243690884,2.39563310759697,0,0.286888821570705,8.31650891365033,0,0,0,0,7.03922827210363,0.244482888365733,1.62758471326295,0,1.40891655513718,0 | |phase1_expression=13.4442000660212,52.2405278293999,26.6403823741386,39.0285863577209,39.3325763096013,21.8084631025092,7.59899634504932,0,0.522371256399677,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.940364164434263,0,0.273748850145768,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2889311810753,2.00535164254356,3.62116297402059,1.5905718941022,1.45990461090791,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,2.5326102332916,0,2.29469296599051,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,4.94533858557114,0,0,0,0,0,1.31693286264251,9.19463387397059,7.51190294532984,0,7.71375433462106,1.92201649936711,0.635795703478686,1.50045548042201,0.412210116953756,5.15281080091258,2.60563598864226,1.18143432568886,4.18979122193154,1.26216887122057,0.828449087780694,0.646584227275248,4.61512470271599,3.62707553619505,1.18692414617341,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,6.43240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31324739884849,4.59447743336456,0,1.01346914667305,0.410952645100767,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,1.45579603071565,2.49800584316026,2.20783381047509,0,0.601892199455438,2.27407504055985,0,1.99267679560631,0.368738337083406,0,0,1.02943027143257,0,0,0,0,0,0,13.8940372378515,12.276957863045,45.4669352981579,5.38184426873944,17.9097537173346,5.79074116116987,4.45254199334973,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79515087581472,0.328014645699706,1.95227036798582,0.515205058238611,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0.979352392114111,0,0,0,0,0,0.31481234683064,0,0,0,0,0.9266210955196,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46228093778771,0,0,0,0,0,2.65375590096488,2.63070531152258,0,0,0,0.30982349809975,0,0,0,0,0,4.43326034125095,8.56166721695745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0.994147647766298,0.140669416410513,0,0,0,5.57894367102995,0.276283915531148,0,0,0,6.22079175323615,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,3.05163472634166,0.221158519862449,0,0.219385397153973,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.202203398942031,6.42062117839031,0,0,0,0,0,6.04953580243319,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.678923115418936,0,5.42353777873278,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0.687481272035051,0,0.599037001496973,0,0,3.56072404179649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.472091293214983,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0.533937062838473,6.28817220398664,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60066635191569,1.03018711554838,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0.107824811396682,0,0.436838552768056,0,0,0.123935764259002,0,0.318004350653419,0,0,1.41070377476274,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0.156986185701028,0.157115589916002,0,0,0.215927591218621,0,0.357382720883282,0,0,0,0.801711364730253,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,4.85710993059139,0,0.198950775161368,0,0,0,0,0.0771741581079447,1.74847648403166,0,0.245148321753905,0,0,0,6.339835913751,3.56846940844415,0.375935671919414,0.709036767709349,0,0,0,0,1.46067277649303,0.917458566809082,0.143339583151451,0,0,0.436350690340377,0,9.29987545416878,2.77305377178851,22.0639546683132,0,0.218531143927391,0,0,0.26721740526556,0,0,0.682008283964155,0,0,0,0.852935927603924,2.3806443146374,0,0.186224142887574,0,0.12729431655633,1.0105859447911,0.653150243690884,2.39563310759697,0,0.286888821570705,8.31650891365033,0,0,0,0,7.03922827210363,0.244482888365733,1.62758471326295,0,1.40891655513718,0 | ||
|short_description=p5@ELN | |short_description=p5@ELN | ||
}} | }} |
Latest revision as of 11:01, 19 September 2015
Short description: | p5@ELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ELN_5end |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | 323bp_to_M26867_5end |
EntrezGene: | ELN |
HGNC: | 3327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.81e-17 | 76 |
GAG secreting cell | 3.45e-12 | 9 |
carbohydrate secreting cell | 3.45e-12 | 9 |
fat cell | 5.27e-10 | 15 |
preadipocyte | 7.47e-10 | 12 |
skin fibroblast | 9.73e-10 | 23 |
chondroblast | 1.35e-09 | 6 |
chondrocyte | 1.35e-09 | 6 |
adipocyte of omentum tissue | 4.52e-09 | 3 |
preadipocyte of the breast | 5.99e-09 | 3 |
extracellular matrix secreting cell | 8.55e-09 | 15 |
fibrocyte | 1.81e-08 | 3 |
omentum preadipocyte | 1.81e-08 | 3 |
tendon cell | 1.81e-08 | 3 |
stromal cell | 4.32e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.63e-16 | 6 |
peritoneum | 7.63e-16 | 6 |
abdominal cavity | 7.63e-16 | 6 |
visceral peritoneum | 7.63e-16 | 6 |
cavity lining | 6.24e-13 | 12 |
serous membrane | 6.24e-13 | 12 |
dense regular connective tissue | 1.81e-08 | 3 |
tendon | 1.81e-08 | 3 |
regular connective tissue | 1.81e-08 | 3 |
chest | 2.45e-08 | 11 |
integument | 7.16e-08 | 46 |
integumental system | 7.16e-08 | 46 |
skin of body | 7.37e-08 | 41 |