FFCP PHASE1:Hg19::chrX:131156808..131156816,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51765 | |EntrezGene=51765 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9P289,Q96SR7,Q8NBY1 | |UniProt=Q9P289,Q96SR7,Q8NBY1 | ||
|association_with_transcript=-428bp_to_NM_001042453,NM_016542,uc004ewk.1,uc004ewl.1,uc010nrj.1,uc011mux.1_5end | |association_with_transcript=-428bp_to_NM_001042453,NM_016542,uc004ewk.1,uc004ewl.1,uc010nrj.1,uc011mux.1_5end | ||
|cluster_id=chrX:131156808..131156816,+ | |||
|coexpression_cluster_id=C120 | |coexpression_cluster_id=C120 | ||
|description=CAGE_peak_6_at_MST4_5end | |description=CAGE_peak_6_at_MST4_5end | ||
|id=chrX:131156808..131156816,+ | |id=chrX:131156808..131156816,+ | ||
|ontology_enrichment_celltype=CL:0000037!9.12e-14!172;CL:0000566!9.12e-14!172;CL:0000945!9.81e-13!24;CL:0000826!9.81e-13!24;CL:0000988!1.40e-12!182;CL:0000542!1.43e-12!53;CL:0000051!1.43e-12!53;CL:0002032!1.93e-12!165;CL:0000837!1.93e-12!165;CL:0000838!4.87e-12!52;CL:0000063!5.89e-09!578;CL:0000066!3.03e-07!254;CL:0000236!3.30e-07!14;CL:0000738!6.62e-07!140 | |ontology_enrichment_celltype=CL:0000037!9.12e-14!172;CL:0000566!9.12e-14!172;CL:0000945!9.81e-13!24;CL:0000826!9.81e-13!24;CL:0000988!1.40e-12!182;CL:0000542!1.43e-12!53;CL:0000051!1.43e-12!53;CL:0002032!1.93e-12!165;CL:0000837!1.93e-12!165;CL:0000838!4.87e-12!52;CL:0000063!5.89e-09!578;CL:0000066!3.03e-07!254;CL:0000236!3.30e-07!14;CL:0000738!6.62e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.03e-10;24!CL:0002202;3.54e-09;9!CL:0002632;3.54e-09;9!CL:0002368;2.65e-08;13!CL:0000039;6.50e-08;7!CL:0000586;6.50e-08;7!CL:0002328;1.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.27e-10,24;CL:0000826,4.27e-10,24;CL:0002202,3.37e-09,9;CL:0002632,3.37e-09,9;CL:0000817,1.60e-08,3;CL:0002368,2.46e-08,13;CL:0002328,4.89e-08,3;CL:0002076,5.78e-08,42;CL:0000039,8.80e-08,7;CL:0000586,8.80e-08,7;CL:0000223,9.29e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.06e-31!235;DOID:14566!2.66e-30!239;DOID:0050686!1.17e-20!137;DOID:2531!5.78e-19!51;DOID:0060083!5.78e-19!51;DOID:305!3.13e-18!106;DOID:0050687!8.49e-18!143;DOID:1240!2.17e-13!39;DOID:1749!5.35e-11!14;DOID:8692!2.80e-09!31;DOID:0060058!5.46e-08!10;DOID:1036!8.40e-07!8 | |ontology_enrichment_disease=DOID:162!2.06e-31!235;DOID:14566!2.66e-30!239;DOID:0050686!1.17e-20!137;DOID:2531!5.78e-19!51;DOID:0060083!5.78e-19!51;DOID:305!3.13e-18!106;DOID:0050687!8.49e-18!143;DOID:1240!2.17e-13!39;DOID:1749!5.35e-11!14;DOID:8692!2.80e-09!31;DOID:0060058!5.46e-08!10;DOID:1036!8.40e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.82e-15;14!DOID:1036;1.54e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.54e-19,235;DOID:14566,4.75e-18,239;DOID:1749,8.78e-16,14;DOID:0050686,5.10e-14,137;DOID:305,6.79e-13,106;DOID:0050687,1.67e-11,143;DOID:2531,1.35e-10,51;DOID:0060083,1.35e-10,51;DOID:1036,1.27e-07,8;DOID:1240,3.63e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000344!4.54e-07!12 | |ontology_enrichment_uberon=UBERON:0000344!4.54e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.43e-10;4!UBERON:0004785;2.43e-10;4!UBERON:0000485;4.94e-08;7!UBERON:0000344;5.23e-08;20!UBERON:0004815;1.07e-07;3!UBERON:0002031;1.07e-07;3!UBERON:0000974;7.31e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.16e-10,4;UBERON:0004785,2.16e-10,4;UBERON:0000344,3.11e-08,20;UBERON:0004815,4.89e-08,3;UBERON:0002031,4.89e-08,3;UBERON:0000974,5.80e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.764134057479513,0.246301768349837,0.0787107813136792,0.393364276848904,0.383829398097213,0.619264493264304,1.83884244895785,1.8072355126695,4.06729411183466,3.56349122669387,3.9807385096478,5.87200878669694,0.553995408531877,1.40381113229099,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.641858054152187,0.639337125799041,0,0.199463657621632,0,0,0,1.24564449799115,0,0.521482918420201,0,0.605399502633369,0,0,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,2.86216126360609,0.569212969109448,0.587237189370939,1.91136614062614,1.32171328579026,0.560508562981536,2.10707267820062,0,0,0.411202997999018,0,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0.593146252648242,0.267540828089713,0,0,1.14966148080576,0.68725489096526,0.253019692019503,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0.728590576585084,0.741568885568859,0,0,0,0.715471872916026,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.10366105501537,0.504641701751257,1.82488679537915,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.329250856225877,0,0.904760751704678,1.574003567695,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,1.71697232418975,0,0,0,1.87467667973554,0,0.425325291727159,2.95543124919399,1.74380363108377,0.383382679165211,0,0,0.207328115540772,0.864719720501769,0.6312121671319,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,1.2329365839288,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0.0890320356467374,0.165284915360978,0,3.95599408733211,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,2.01090682660736,10.8890984861323,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.929015875628594,3.31819189845823,0.569134746787313,0.318852545457645,0.199579371432817,0.191505370132367,1.05836791361941,0,0.280797178113459,0.684704037099577,0.626719583092093,2.50634477090067,0,0,0.80719882876419,2.12923118845163,0.687010689511529,0.614481528616916,0,0,0,0.278406173895242,1.23087398947712,0.270455678475983,0.33307196799782,1.4098700508785,0.561421621224659,0,0,0.222886768554957,0,0,0,0,0,0,0,0.824019371133798,0.211125408127993,0,0,0.503865495708552,0,1.10776324914963,0,2.24670877868317,0,0,0,0,0,0,0,0,0,4.19807999981739,0,1.82069517256799,1.01701460117107,0.472775363535873,1.03423011972439,1.16641845353302,0,0,0,0,0,0,0,1.63407695278485,0.139423744278603,0,0.113942055847001,1.38338342632836,2.06442582142476,0.108647371922008,3.50901275705111,0,3.73124343213044,3.06579894587209,0.156980256395025,1.32969345520125,1.57916962432026,0.980312671588698,0.335643173951685,7.96965677441577,1.74830236878417,1.26598838716816,0,1.41353071433941,1.94749775767882,0,0,0,1.77912677208373,0.123563938946503,0,0,0,0,2.18945747058799,6.06560318689478,1.45668227720456,0,0,0,0,8.56843490662608,0.622129148383483,0,0,0,1.19472429772959,0.284609546029793,0,0,0.881931576729399,1.74118413160805,0,0,0,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0,0.274083849293502,0.19871461170299,0,0,0.240476460754601,0,0,0.576361668616424,0,2.05913997434357,1.29649318189335,0.621262677827163,0.707082103850386,0,0,0,0.288950589901519,0,0,1.27746588066972,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.202210631562555,0,6.35049990493384,0,0,0,0.137539436597234,0.83088067605837,0.899895566206002,40.2377016370134,0,0.335434687599266,0,0,0.950403028674658,0.179287339332845,1.53532157855556,0,0,0,0,0,0,0,3.11951578847488,0,0.226624183040251,0,0,0,0,0,1.40963004463334,0,0,0,0.992332043623902,0.592834895693833,1.94868157409433,8.93677760878255,0,0,0,0.327872630709804,1.09937867375164,0,0,0,0,0,0,2.07522952404346,0,1.51649117541648,0,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.782982875895635,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0.76872455576384,0,0,0,0.194860308839388,0,0.163565394255844,0,0,1.901809110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| 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| ||
|short_description=p6@MST4 | |short_description=p6@MST4 | ||
}} | }} |
Latest revision as of 10:58, 19 September 2015
Short description: | p6@MST4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MST4_5end |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | -428bp_to_NM_001042453, NM_016542, uc004ewk.1, uc004ewl.1, uc010nrj.1, uc011mux.1_5end |
EntrezGene: | MST4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.27e-10 | 24 |
pro-B cell | 4.27e-10 | 24 |
epithelial cell of tracheobronchial tree | 3.37e-09 | 9 |
epithelial cell of lower respiratory tract | 3.37e-09 | 9 |
precursor B cell | 1.60e-08 | 3 |
respiratory epithelial cell | 2.46e-08 | 13 |
bronchial epithelial cell | 4.89e-08 | 3 |
endo-epithelial cell | 5.78e-08 | 42 |
germ line cell | 8.80e-08 | 7 |
germ cell | 8.80e-08 | 7 |
endodermal cell | 9.29e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 2.16e-10 | 4 |
respiratory system mucosa | 2.16e-10 | 4 |
mucosa | 3.11e-08 | 20 |
lower respiratory tract epithelium | 4.89e-08 | 3 |
epithelium of bronchus | 4.89e-08 | 3 |
neck | 5.80e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.54e-19 | 235 |
disease of cellular proliferation | 4.75e-18 | 239 |
squamous cell carcinoma | 8.78e-16 | 14 |
organ system cancer | 5.10e-14 | 137 |
carcinoma | 6.79e-13 | 106 |
cell type cancer | 1.67e-11 | 143 |
hematologic cancer | 1.35e-10 | 51 |
immune system cancer | 1.35e-10 | 51 |
chronic leukemia | 1.27e-07 | 8 |
leukemia | 3.63e-07 | 39 |