FFCP PHASE1:Hg19::chr2:201599836..201599844,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100507140 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=55bp_to_ENST00000452787,NR_037886,uc002uvy.1_5end | |||
|cluster_id=chr2:201599836..201599844,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_LOC100507140_5end | |||
|id=chr2:201599836..201599844,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.97e-34;1!UBERON:0003056;2.74e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.15e-100!57;UBERON:0005068!9.15e-100!57;UBERON:0006241!9.15e-100!57;UBERON:0007135!9.15e-100!57;UBERON:0002616!8.96e-85!59;UBERON:0000955!2.02e-75!69;UBERON:0006238!2.02e-75!69;UBERON:0002780!1.21e-74!41;UBERON:0001890!1.21e-74!41;UBERON:0006240!1.21e-74!41;UBERON:0003080!8.77e-73!42;UBERON:0001017!3.39e-71!82;UBERON:0001893!3.23e-69!34;UBERON:0002020!8.87e-69!34;UBERON:0003528!8.87e-69!34;UBERON:0005743!1.14e-67!86;UBERON:0002791!5.90e-65!33;UBERON:0000073!8.60e-65!94;UBERON:0001016!8.60e-65!94;UBERON:0003075!2.13e-64!86;UBERON:0007284!2.13e-64!86;UBERON:0002346!2.75e-61!90;UBERON:0001869!2.97e-60!32;UBERON:0007023!6.24e-57!115;UBERON:0003056!8.01e-49!61;UBERON:0000033!7.79e-43!123;UBERON:0002619!1.39e-42!22;UBERON:0000153!1.41e-40!129;UBERON:0007811!1.41e-40!129;UBERON:0001950!3.44e-40!20;UBERON:0000956!2.52e-37!25;UBERON:0000203!2.52e-37!25;UBERON:0002308!1.47e-36!9;UBERON:0000125!1.47e-36!9;UBERON:0004121!1.11e-33!169;UBERON:0000924!9.15e-33!173;UBERON:0006601!9.15e-33!173;UBERON:0002298!2.57e-31!8;UBERON:0002420!3.03e-28!9;UBERON:0007245!3.03e-28!9;UBERON:0010009!3.03e-28!9;UBERON:0010011!3.03e-28!9;UBERON:0000454!3.03e-28!9;UBERON:0009663!3.39e-27!7;UBERON:0003076!1.57e-26!15;UBERON:0003057!1.57e-26!15;UBERON:0000025!3.94e-25!194;UBERON:0004732!1.20e-24!13;UBERON:0000200!3.28e-22!6;UBERON:0004733!2.43e-20!12;UBERON:0002028!2.43e-20!12;UBERON:0007277!2.43e-20!12;UBERON:0004111!5.82e-19!241;UBERON:0002771!3.38e-17!3;UBERON:0001896!8.95e-17!3;UBERON:0005290!8.95e-17!3;UBERON:0010096!8.95e-17!3;UBERON:0001871!1.43e-16!7;UBERON:0006331!3.04e-16!3;UBERON:0000477!3.80e-16!286;UBERON:0000988!6.68e-16!3;UBERON:0000064!2.78e-14!219;UBERON:0000483!2.50e-13!309;UBERON:0000119!3.89e-13!312;UBERON:0005162!1.83e-12!2;UBERON:0000122!1.83e-12!2;UBERON:0001897!2.16e-12!2;UBERON:0000369!2.19e-12!4;UBERON:0002435!2.19e-12!4;UBERON:0000204!2.19e-12!4;UBERON:0010082!2.19e-12!4;UBERON:0001875!3.01e-12!2;UBERON:0006514!3.01e-12!2;UBERON:0000475!4.06e-12!365;UBERON:0002148!3.23e-11!2;UBERON:0009662!3.23e-11!2;UBERON:0002021!1.90e-10!5;UBERON:0000349!2.54e-10!5;UBERON:0001872!3.82e-10!5;UBERON:0002680!3.42e-09!9;UBERON:0001895!3.42e-09!9;UBERON:0010092!3.42e-09!9;UBERON:0002240!6.26e-08!3;UBERON:0005383!9.52e-08!3;UBERON:0005382!9.52e-08!3;UBERON:0001894!1.11e-07!7;UBERON:0006222!1.11e-07!7;UBERON:0000062!2.30e-07!511;UBERON:0002336!4.33e-07!1;UBERON:0001018!4.33e-07!1;UBERON:0002473!4.33e-07!1;UBERON:0005340!4.33e-07!1;UBERON:0002316!4.33e-07!1;UBERON:0003544!4.33e-07!1;UBERON:0001020!4.33e-07!1;UBERON:0005970!4.33e-07!1;UBERON:0002437!4.33e-07!1;UBERON:0000941!4.85e-07!1;UBERON:0004904!4.85e-07!1;UBERON:0002464!4.85e-07!1;UBERON:0001021!4.85e-07!1;UBERON:0001785!4.85e-07!1;UBERON:0001882!7.60e-07!1;UBERON:0005403!7.60e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;2.03e-66;2!UBERON:0000122;2.03e-66;2!UBERON:0001897;5.53e-66;2!UBERON:0010225;5.53e-66;2!UBERON:0002336;2.18e-34;1!UBERON:0011215;2.18e-34;1!UBERON:0001018;2.18e-34;1!UBERON:0002473;2.18e-34;1!UBERON:0005340;2.18e-34;1!UBERON:0003544;2.18e-34;1!UBERON:0005970;2.18e-34;1!UBERON:0002316;2.18e-34;1!UBERON:0001020;2.18e-34;1!UBERON:0002437;2.18e-34;1!UBERON:0000941;5.97e-34;1!UBERON:0001785;5.97e-34;1!UBERON:0002464;5.97e-34;1!UBERON:0004904;5.97e-34;1!UBERON:0001021;5.97e-34;1!UBERON:0002784;1.17e-33;4!UBERON:0001894;9.48e-20;7!UBERON:0001875;5.96e-18;2!UBERON:0006514;5.96e-18;2!UBERON:0002771;9.86e-18;2!UBERON:0003714;9.86e-18;2!UBERON:0002780;7.16e-15;41!UBERON:0001890;7.16e-15;41!UBERON:0000073;2.28e-13;53!UBERON:0002616;2.28e-13;53!UBERON:0001893;4.77e-08;34!UBERON:0001016;2.24e-07;83!UBERON:0000200;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,2.03e-66,2;UBERON:0000122,2.03e-66,2;UBERON:0001897,5.53e-66,2;UBERON:0010225,5.53e-66,2;UBERON:0002336,2.58e-34,1;UBERON:0011215,2.58e-34,1;UBERON:0001018,2.58e-34,1;UBERON:0002473,2.58e-34,1;UBERON:0005340,2.58e-34,1;UBERON:0003544,2.58e-34,1;UBERON:0005970,2.58e-34,1;UBERON:0002316,2.58e-34,1;UBERON:0001020,2.58e-34,1;UBERON:0002437,2.58e-34,1;UBERON:0000941,5.05e-34,1;UBERON:0001785,5.05e-34,1;UBERON:0002464,5.05e-34,1;UBERON:0004904,5.05e-34,1;UBERON:0001021,5.05e-34,1;UBERON:0003902,5.05e-34,1;UBERON:0005425,5.05e-34,1;UBERON:0002784,1.17e-33,4;UBERON:0002780,4.46e-20,41;UBERON:0001890,4.46e-20,41;UBERON:0003080,4.46e-20,41;UBERON:0006240,4.46e-20,41;UBERON:0001894,9.49e-20,7;UBERON:0006222,9.49e-20,7;UBERON:0003056,1.49e-19,61;UBERON:0001875,5.48e-18,2;UBERON:0006514,5.48e-18,2;UBERON:0003714,9.07e-18,2;UBERON:0002771,1.07e-17,2;UBERON:0000073,9.69e-16,53;UBERON:0002616,9.69e-16,53;UBERON:0001049,6.12e-15,56;UBERON:0005068,6.12e-15,56;UBERON:0006241,6.12e-15,56;UBERON:0007135,6.12e-15,56;UBERON:0003075,9.81e-15,82;UBERON:0007284,9.81e-15,82;UBERON:0002346,4.44e-14,86;UBERON:0001016,2.44e-13,89;UBERON:0000955,2.95e-12,68;UBERON:0006238,2.95e-12,68;UBERON:0010371,9.68e-12,104;UBERON:0007023,7.60e-11,114;UBERON:0001017,2.09e-10,81;UBERON:0001781,1.44e-09,4;UBERON:0010314,2.38e-09,132;UBERON:0001893,2.81e-09,34;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171;UBERON:0000966,8.48e-07,6;UBERON:0005388,8.48e-07,6;UBERON:0001802,8.48e-07,6;UBERON:0000200,8.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02203398942031,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,2.32739144116388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953423842781029,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.876336514945499,0.573409195690071,0.554645257684261,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0.957803154342908,0.82046545696302,0,0.414943514785307,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.887821342714695,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,1.03432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@LOC100507140 | |||
}} |
Latest revision as of 10:57, 19 September 2015
Short description: | p3@LOC100507140 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100507140_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 55bp_to_ENST00000452787, NR_037886, uc002uvy.1_5end |
EntrezGene: | LOC100507140 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data