FFCP PHASE1:Hg19::chr17:29421987..29422014,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:29421987..29422014,+ to FFCP PHASE1:Hg19::chr17:29421987..29422014,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4763 | |EntrezGene=4763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7765 | |HGNC=7765 | ||
|TSSclassifier=strong | |||
|UniProt=P21359,Q14931 | |UniProt=P21359,Q14931 | ||
|association_with_transcript=0bp_to_uc002hge.1,uc002hgf.1,uc002hgg.2,uc002hgh.2_5end | |||
|cluster_id=chr17:29421987..29422014,+ | |||
|description=CAGE_peak_1_at_NF1_5end | |||
|id=chr17:29421987..29422014,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.25e-11;82 | |||
|ontology_enrichment_disease=DOID:0050687!3.64e-11!143;DOID:305!2.54e-07!106;DOID:162!4.17e-07!235;DOID:14566!6.59e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.64e-11,143;DOID:305,2.54e-07,106;DOID:162,4.22e-07,235;DOID:14566,6.67e-07,239 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.05e-16;41!UBERON:0001890;4.05e-16;41!UBERON:0003528;1.14e-15;34!UBERON:0002020;1.14e-15;34!UBERON:0001893;1.22e-15;34!UBERON:0002791;1.54e-15;32!UBERON:0001869;1.63e-15;32!UBERON:0000073;1.97e-14;53!UBERON:0002616;1.97e-14;53!UBERON:0002619;1.19e-13;22!UBERON:0000956;2.20e-13;25!UBERON:0000203;2.20e-13;25!UBERON:0000955;1.16e-12;68!UBERON:0001950;1.71e-12;20!UBERON:0001017;5.18e-12;75!UBERON:0001016;9.29e-12;83!UBERON:0007023;1.67e-08;114!UBERON:0011216;3.18e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,4.98e-29,223;UBERON:0001016,6.99e-27,89;UBERON:0000955,2.77e-26,68;UBERON:0006238,2.77e-26,68;UBERON:0007023,5.45e-26,114;UBERON:0001017,8.83e-26,81;UBERON:0001049,2.46e-25,56;UBERON:0005068,2.46e-25,56;UBERON:0006241,2.46e-25,56;UBERON:0007135,2.46e-25,56;UBERON:0000073,1.86e-24,53;UBERON:0002616,1.86e-24,53;UBERON:0004121,1.44e-22,171;UBERON:0000924,1.44e-22,171;UBERON:0006601,1.44e-22,171;UBERON:0002780,3.18e-22,41;UBERON:0001890,3.18e-22,41;UBERON:0003080,3.18e-22,41;UBERON:0006240,3.18e-22,41;UBERON:0003075,5.45e-20,82;UBERON:0007284,5.45e-20,82;UBERON:0002346,7.08e-20,86;UBERON:0003528,2.51e-18,34;UBERON:0002020,2.51e-18,34;UBERON:0001893,3.27e-18,34;UBERON:0001869,2.96e-17,32;UBERON:0002791,3.40e-17,32;UBERON:0010314,1.75e-16,132;UBERON:0003056,8.02e-16,61;UBERON:0010371,3.24e-15,104;UBERON:0002619,1.18e-13,22;UBERON:0000956,1.89e-13,25;UBERON:0000203,1.89e-13,25;UBERON:0001950,1.68e-12,20;UBERON:0004111,6.08e-09,240;UBERON:0000922,5.04e-08,592;UBERON:0001007,7.25e-08,145;UBERON:0001555,7.25e-08,145;UBERON:0007026,7.25e-08,145;UBERON:0000025,2.56e-07,192;UBERON:0005423,3.98e-07,581;UBERON:0000923,4.73e-07,560;UBERON:0010316,4.73e-07,560;UBERON:0005291,4.73e-07,560;UBERON:0006598,4.73e-07,560;UBERON:0010317,4.73e-07,560;UBERON:0002532,4.73e-07,560;UBERON:0002050,5.52e-07,564 | |||
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| ||
|short_description=p1@NF1 | |||
}} | }} |
Latest revision as of 10:52, 19 September 2015
Short description: | p1@NF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002hge.1, uc002hgf.1, uc002hgg.2, uc002hgh.2_5end |
EntrezGene: | NF1 |
HGNC: | 7765 |
UniProt: | P21359Q14931 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.64e-11 | 143 |
carcinoma | 2.54e-07 | 106 |
cancer | 4.22e-07 | 235 |
disease of cellular proliferation | 6.67e-07 | 239 |