FFCP PHASE1:Hg19::chr6:57086937..57086942,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51715 | |EntrezGene=51715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14263 | |HGNC=14263 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULC3 | |UniProt=Q9ULC3 | ||
|association_with_transcript=135bp_to_ENST00000317483,NM_016277,uc003pdt.2_5end | |association_with_transcript=135bp_to_ENST00000317483,NM_016277,uc003pdt.2_5end | ||
|cluster_id=chr6:57086937..57086942,- | |||
|description=CAGE_peak_11_at_RAB23_5end | |description=CAGE_peak_11_at_RAB23_5end | ||
|id=chr6:57086937..57086942,- | |id=chr6:57086937..57086942,- | ||
|ontology_enrichment_celltype=CL:0002620!4.77e-11!23 | |ontology_enrichment_celltype=CL:0002620!4.77e-11!23 | ||
|ontology_enrichment_celltype_v019=CL:0002540;1.08e-17;6!CL:0002092;5.02e-11;10!CL:1000306;1.80e-07;4!CL:0002547;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,1.03e-17,6;CL:0002092,4.89e-11,10;CL:1000306,1.80e-07,4;CL:0002547,1.80e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;7.62e-26;1!DOID:3350;1.21e-13;2!DOID:3307;1.21e-13;2!DOID:0060084;1.14e-09;3!DOID:127;1.14e-09;3!DOID:0060072;1.44e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,5.93e-26,1;DOID:3307,9.40e-14,2;DOID:3350,1.07e-13,2;DOID:0060084,1.19e-09,3;DOID:127,1.19e-09,3;DOID:0060072,1.49e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004905!4.30e-07!5;UBERON:0000982!4.30e-07!5;UBERON:0004770!4.30e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002371;2.39e-09;12!UBERON:0004797;1.80e-07;4!UBERON:0000415;1.80e-07;4!UBERON:0007240;1.80e-07;4!UBERON:0005742;1.80e-07;4!UBERON:0005734;1.80e-07;4!UBERON:0004664;1.80e-07;4!UBERON:0004663;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.80e-07,4;UBERON:0007240,1.80e-07,4;UBERON:0005742,1.80e-07,4;UBERON:0005734,1.80e-07,4;UBERON:0004664,1.80e-07,4;UBERON:0004663,1.80e-07,4 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.74259811776028,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,1.58891016975863,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,1.50238058906597,0,0,0,0.211931901159562,0,0.206105058476878,0.257640540045629,0.558350568994769,1.0126579934476,0.389748020644795,0.252433774244115,0.368199594569197,0,0.355009592516614,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.868687840005475,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.482561763430822,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0.364182336013434,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,1.89184635718778,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,2.5926644736038,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,2.65164207385125,3.0188148210309,0,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.980593287015622,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0.366724332548599,0,0,0,0 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.74259811776028,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,1.58891016975863,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,1.50238058906597,0,0,0,0.211931901159562,0,0.206105058476878,0.257640540045629,0.558350568994769,1.0126579934476,0.389748020644795,0.252433774244115,0.368199594569197,0,0.355009592516614,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.868687840005475,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.482561763430822,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0.364182336013434,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,1.89184635718778,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,2.5926644736038,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,2.65164207385125,3.0188148210309,0,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.980593287015622,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p11@RAB23 | |short_description=p11@RAB23 | ||
}} | }} |
Latest revision as of 10:41, 19 September 2015
Short description: | p11@RAB23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RAB23_5end |
Coexpression cluster: | NA |
Association with transcript: | 135bp_to_ENST00000317483, NM_016277, uc003pdt.2_5end |
EntrezGene: | RAB23 |
HGNC: | 14263 |
UniProt: | Q9ULC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 1.03e-17 | 6 |
bone marrow cell | 4.89e-11 | 10 |
fibroblast of tunica adventitia of artery | 1.80e-07 | 4 |
fibroblast of the aortic adventitia | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.80e-07 | 4 |
tunica adventitia of artery | 1.80e-07 | 4 |
adventitia | 1.80e-07 | 4 |
tunica adventitia of blood vessel | 1.80e-07 | 4 |
aorta tunica adventitia | 1.80e-07 | 4 |
aorta wall | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 5.93e-26 | 1 |
teratoma | 9.40e-14 | 2 |
mesenchymal cell neoplasm | 1.07e-13 | 2 |
cell type benign neoplasm | 1.19e-09 | 3 |
leiomyoma | 1.19e-09 | 3 |
benign neoplasm | 1.49e-07 | 4 |