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FFCP PHASE1:Hg19::chr7:73242490..73242532,+: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=1364|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2046|TSSclassifier=W|UniProt=O14493|association_with_transcript=0bp_to_ENST00000431918_5end|description=CAGE_peak_4_at_CLDN4_5end|id=chr7:73242490..73242532,+|ontology_enrichment_celltype=CL:0000066!4.48e-14!254;CL:0000082!7.72e-08!19;CL:1000507!5.15e-07!12;CL:1000494!5.15e-07!12|ontology_enrichment_celltype_v019=CL:0000167;9.60e-12;1!CL:0000164;9.60e-12;1!CL:0000502;9.60e-12;1!CL:0000172;9.60e-12;1!CL:0000222;9.60e-12;1!CL:0000313;9.60e-12;1!CL:0000173;9.60e-12;1!CL:0002149;5.35e-08;6!CL:0002255;5.35e-08;6|ontology_enrichment_celltype_v019_2=CL:0000167,6.97e-12,1;CL:0000164,6.97e-12,1;CL:0000502,6.97e-12,1;CL:0000172,6.97e-12,1;CL:0000173,6.97e-12,1;CL:0002351,6.97e-12,1;CL:0000313,1.47e-11,1;CL:0002149,5.95e-08,6;CL:0002255,5.95e-08,6|ontology_enrichment_development_v019=CL:0002351;9.60e-12;1|ontology_enrichment_disease=DOID:305!3.18e-24!106;DOID:0050687!1.95e-16!143;DOID:299!3.68e-12!25;DOID:0050615!5.23e-12!16;DOID:1324!1.57e-10!15;DOID:162!9.14e-10!235;DOID:14566!2.81e-09!239;DOID:0050686!1.60e-07!137|ontology_enrichment_disease_v019=DOID:299;6.93e-20;25!DOID:2152;9.60e-12;1!DOID:4430;9.60e-12;1!DOID:120;1.11e-09;27!DOID:193;5.26e-09;29!DOID:3001;5.35e-08;6|ontology_enrichment_disease_v019_2=DOID:299,9.01e-20,25;DOID:305,2.12e-12,106;DOID:4430,6.97e-12,1;DOID:2152,1.47e-11,1;DOID:0050687,2.14e-10,143;DOID:120,1.41e-09,27;DOID:193,6.59e-09,29;DOID:3001,5.95e-08,6;DOID:0050686,1.53e-07,137|ontology_enrichment_uberon=UBERON:0000464!4.47e-13!104;UBERON:0005153!1.86e-12!37;UBERON:0002048!3.42e-11!22;UBERON:0000117!3.42e-11!22;UBERON:0000171!3.42e-11!22;UBERON:0000170!3.42e-11!22;UBERON:0005597!3.42e-11!22;UBERON:0000118!3.42e-11!22;UBERON:0000466!1.13e-10!126;UBERON:0005157!9.47e-09!51;UBERON:0004802!7.72e-08!19;UBERON:0000115!7.72e-08!19;UBERON:0000058!8.71e-08!26;UBERON:0000077!1.84e-07!130;UBERON:0005178!2.56e-07!34;UBERON:0002224!2.56e-07!34;UBERON:0005177!2.65e-07!107;UBERON:0008947!2.82e-07!38;UBERON:0003258!2.82e-07!38;UBERON:0002553!3.69e-07!70;UBERON:0001007!4.60e-07!155;UBERON:0001555!4.60e-07!155;UBERON:0007026!4.60e-07!155;UBERON:0005181!5.15e-07!35;UBERON:0009773!5.15e-07!12;UBERON:0001231!5.15e-07!12;UBERON:0004810!5.15e-07!12;UBERON:0000080!5.20e-07!18;UBERON:0002120!5.20e-07!18;UBERON:0004875!5.20e-07!18;UBERON:0005721!5.20e-07!18;UBERON:0005754!5.20e-07!18;UBERON:0007297!5.20e-07!18;UBERON:0005911!5.29e-07!82;UBERON:0004921!7.57e-07!129;UBERON:0004185!7.57e-07!129;UBERON:0004807!8.63e-07!28|ontology_enrichment_uberon_v019=UBERON:0000007;2.84e-22;2!UBERON:0004911;9.60e-12;1!UBERON:0004913;9.60e-12;1!UBERON:0003703;9.60e-12;1!UBERON:0001174;9.60e-12;1!UBERON:0004914;9.60e-12;1!UBERON:0003296;1.26e-11;4!UBERON:0010133;1.26e-11;4!UBERON:0001894;5.18e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.49e-22,2;UBERON:0004913,8.64e-12,1;UBERON:0003703,8.64e-12,1;UBERON:0001174,8.64e-12,1;UBERON:0004914,8.64e-12,1;UBERON:0003296,9.13e-12,4;UBERON:0010133,9.13e-12,4;UBERON:0004911,1.47e-11,1;UBERON:0001894,4.33e-07,7;UBERON:0006222,4.33e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0.0920809889358963,0,0,0,0.451199612907412,0.462092022626489,0.784349769176855,2.92278449306521,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.552567831062295,2.77126022639704,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.227586896570999,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,1.14262965711403,0,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0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{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=1364
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=2046
|TSSclassifier=strong
|UniProt=O14493
|association_with_transcript=0bp_to_ENST00000431918_5end
|cluster_id=chr7:73242490..73242532,+
|description=CAGE_peak_4_at_CLDN4_5end
|id=chr7:73242490..73242532,+
|ontology_enrichment_celltype=CL:0000066!4.48e-14!254;CL:0000082!7.72e-08!19;CL:1000507!5.15e-07!12;CL:1000494!5.15e-07!12
|ontology_enrichment_celltype_v019=CL:0000167;9.60e-12;1!CL:0000164;9.60e-12;1!CL:0000502;9.60e-12;1!CL:0000172;9.60e-12;1!CL:0000222;9.60e-12;1!CL:0000313;9.60e-12;1!CL:0000173;9.60e-12;1!CL:0002149;5.35e-08;6!CL:0002255;5.35e-08;6
|ontology_enrichment_celltype_v019_2=CL:0000167,6.97e-12,1;CL:0000164,6.97e-12,1;CL:0000502,6.97e-12,1;CL:0000172,6.97e-12,1;CL:0000173,6.97e-12,1;CL:0002351,6.97e-12,1;CL:0000313,1.47e-11,1;CL:0002149,5.95e-08,6;CL:0002255,5.95e-08,6
|ontology_enrichment_development_v019=CL:0002351;9.60e-12;1
|ontology_enrichment_disease=DOID:305!3.18e-24!106;DOID:0050687!1.95e-16!143;DOID:299!3.68e-12!25;DOID:0050615!5.23e-12!16;DOID:1324!1.57e-10!15;DOID:162!9.14e-10!235;DOID:14566!2.81e-09!239;DOID:0050686!1.60e-07!137
|ontology_enrichment_disease_v019=DOID:299;6.93e-20;25!DOID:2152;9.60e-12;1!DOID:4430;9.60e-12;1!DOID:120;1.11e-09;27!DOID:193;5.26e-09;29!DOID:3001;5.35e-08;6
|ontology_enrichment_disease_v019_2=DOID:299,9.01e-20,25;DOID:305,2.12e-12,106;DOID:4430,6.97e-12,1;DOID:2152,1.47e-11,1;DOID:0050687,2.14e-10,143;DOID:120,1.41e-09,27;DOID:193,6.59e-09,29;DOID:3001,5.95e-08,6;DOID:0050686,1.53e-07,137
|ontology_enrichment_uberon=UBERON:0000464!4.47e-13!104;UBERON:0005153!1.86e-12!37;UBERON:0002048!3.42e-11!22;UBERON:0000117!3.42e-11!22;UBERON:0000171!3.42e-11!22;UBERON:0000170!3.42e-11!22;UBERON:0005597!3.42e-11!22;UBERON:0000118!3.42e-11!22;UBERON:0000466!1.13e-10!126;UBERON:0005157!9.47e-09!51;UBERON:0004802!7.72e-08!19;UBERON:0000115!7.72e-08!19;UBERON:0000058!8.71e-08!26;UBERON:0000077!1.84e-07!130;UBERON:0005178!2.56e-07!34;UBERON:0002224!2.56e-07!34;UBERON:0005177!2.65e-07!107;UBERON:0008947!2.82e-07!38;UBERON:0003258!2.82e-07!38;UBERON:0002553!3.69e-07!70;UBERON:0001007!4.60e-07!155;UBERON:0001555!4.60e-07!155;UBERON:0007026!4.60e-07!155;UBERON:0005181!5.15e-07!35;UBERON:0009773!5.15e-07!12;UBERON:0001231!5.15e-07!12;UBERON:0004810!5.15e-07!12;UBERON:0000080!5.20e-07!18;UBERON:0002120!5.20e-07!18;UBERON:0004875!5.20e-07!18;UBERON:0005721!5.20e-07!18;UBERON:0005754!5.20e-07!18;UBERON:0007297!5.20e-07!18;UBERON:0005911!5.29e-07!82;UBERON:0004921!7.57e-07!129;UBERON:0004185!7.57e-07!129;UBERON:0004807!8.63e-07!28
|ontology_enrichment_uberon_v019=UBERON:0000007;2.84e-22;2!UBERON:0004911;9.60e-12;1!UBERON:0004913;9.60e-12;1!UBERON:0003703;9.60e-12;1!UBERON:0001174;9.60e-12;1!UBERON:0004914;9.60e-12;1!UBERON:0003296;1.26e-11;4!UBERON:0010133;1.26e-11;4!UBERON:0001894;5.18e-07;7
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.49e-22,2;UBERON:0004913,8.64e-12,1;UBERON:0003703,8.64e-12,1;UBERON:0001174,8.64e-12,1;UBERON:0004914,8.64e-12,1;UBERON:0003296,9.13e-12,4;UBERON:0010133,9.13e-12,4;UBERON:0004911,1.47e-11,1;UBERON:0001894,4.33e-07,7;UBERON:0006222,4.33e-07,7
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|short_description=p4@CLDN4
}}

Latest revision as of 10:33, 19 September 2015

Short description:p4@CLDN4
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_CLDN4_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENST00000431918_5end
EntrezGene:CLDN4
HGNC: 2046
UniProt: O14493
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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