FFCP PHASE1:Hg19::chr6:56820152..56820178,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:56820152..56820178,+
|short_description=p3@BEND6
|description=CAGE_peak_3_at_BEND6_5end
|association_with_transcript=0bp_to_ENST00000370745_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221336 | |EntrezGene=221336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20871 | |HGNC=20871 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SZK0 | |UniProt=Q5SZK0 | ||
|association_with_transcript=0bp_to_ENST00000370745_5end | |||
|cluster_id=chr6:56820152..56820178,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_BEND6_5end | |||
|id=chr6:56820152..56820178,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.02e-12;3!UBERON:0006601;3.65e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.62e-25!57;UBERON:0005068!6.62e-25!57;UBERON:0006241!6.62e-25!57;UBERON:0007135!6.62e-25!57;UBERON:0002616!4.42e-21!59;UBERON:0000955!2.97e-19!69;UBERON:0006238!2.97e-19!69;UBERON:0001017!1.26e-18!82;UBERON:0003075!2.98e-18!86;UBERON:0007284!2.98e-18!86;UBERON:0000073!4.24e-18!94;UBERON:0001016!4.24e-18!94;UBERON:0005743!6.06e-18!86;UBERON:0002780!1.47e-17!41;UBERON:0001890!1.47e-17!41;UBERON:0006240!1.47e-17!41;UBERON:0002346!5.72e-17!90;UBERON:0002020!5.92e-17!34;UBERON:0003528!5.92e-17!34;UBERON:0003080!9.01e-17!42;UBERON:0001893!1.64e-16!34;UBERON:0001869!5.99e-16!32;UBERON:0002791!9.78e-16!33;UBERON:0002619!7.72e-13!22;UBERON:0000956!5.05e-12!25;UBERON:0000203!5.05e-12!25;UBERON:0001950!2.34e-11!20;UBERON:0000153!2.42e-11!129;UBERON:0007811!2.42e-11!129;UBERON:0000033!2.60e-11!123;UBERON:0007023!3.37e-11!115;UBERON:0003056!4.20e-11!61;UBERON:0003076!1.66e-09!15;UBERON:0003057!1.66e-09!15;UBERON:0004732!4.34e-08!13;UBERON:0004121!8.32e-08!169;UBERON:0000924!2.14e-07!173;UBERON:0006601!2.14e-07!173;UBERON:0004733!2.35e-07!12;UBERON:0002028!2.35e-07!12;UBERON:0007277!2.35e-07!12;UBERON:0000475!7.37e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.13e-31;22!UBERON:0001869;9.62e-31;32!UBERON:0003528;1.59e-30;34!UBERON:0002020;1.59e-30;34!UBERON:0002791;1.01e-27;32!UBERON:0000956;1.38e-27;25!UBERON:0000203;1.38e-27;25!UBERON:0001893;1.63e-27;34!UBERON:0001950;4.43e-26;20!UBERON:0000073;2.73e-24;53!UBERON:0002616;2.73e-24;53!UBERON:0002780;1.12e-21;41!UBERON:0001890;1.12e-21;41!UBERON:0004732;2.33e-21;13!UBERON:0004733;1.37e-18;12!UBERON:0002028;1.37e-18;12!UBERON:0001017;4.86e-16;75!UBERON:0000955;1.01e-15;68!UBERON:0000200;1.98e-15;6!UBERON:0002298;2.48e-15;6!UBERON:0002680;8.85e-15;9!UBERON:0001895;8.85e-15;9!UBERON:0001016;5.68e-14;83!UBERON:0000988;2.09e-12;3!UBERON:0002021;6.98e-12;5!UBERON:0001870;1.27e-11;3!UBERON:0000349;1.93e-11;5!UBERON:0000125;8.64e-10;9!UBERON:0002308;8.64e-10;9!UBERON:0007023;2.88e-09;114!UBERON:0002148;9.34e-09;2!UBERON:0006331;9.34e-09;2!UBERON:0009662;9.34e-09;2!UBERON:0002702;1.43e-08;2!UBERON:0002771;2.76e-08;2!UBERON:0001954;3.55e-08;2!UBERON:0003022;3.55e-08;2!UBERON:0002421;3.55e-08;2!UBERON:0002600;3.55e-08;2!UBERON:0001872;5.50e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.53e-49,56;UBERON:0005068,1.53e-49,56;UBERON:0006241,1.53e-49,56;UBERON:0007135,1.53e-49,56;UBERON:0000073,1.97e-45,53;UBERON:0002616,1.97e-45,53;UBERON:0001017,1.35e-36,81;UBERON:0003528,2.84e-36,34;UBERON:0002020,2.84e-36,34;UBERON:0000955,3.73e-36,68;UBERON:0006238,3.73e-36,68;UBERON:0001869,1.21e-34,32;UBERON:0001016,1.61e-34,89;UBERON:0003075,5.90e-34,82;UBERON:0007284,5.90e-34,82;UBERON:0001893,2.23e-32,34;UBERON:0002619,3.84e-32,22;UBERON:0002346,5.04e-32,86;UBERON:0002791,8.37e-31,32;UBERON:0002780,3.83e-29,41;UBERON:0001890,3.83e-29,41;UBERON:0003080,3.83e-29,41;UBERON:0006240,3.83e-29,41;UBERON:0000956,5.38e-28,25;UBERON:0000203,5.38e-28,25;UBERON:0010371,4.63e-27,104;UBERON:0001950,1.34e-26,20;UBERON:0007023,3.13e-24,114;UBERON:0003076,1.57e-22,15;UBERON:0003057,1.57e-22,15;UBERON:0004732,2.69e-21,13;UBERON:0010314,4.11e-21,132;UBERON:0003056,3.90e-20,61;UBERON:0004733,1.81e-18,12;UBERON:0002028,1.81e-18,12;UBERON:0007277,1.81e-18,12;UBERON:0004121,1.16e-16,171;UBERON:0000924,1.16e-16,171;UBERON:0006601,1.16e-16,171;UBERON:0000200,1.29e-15,6;UBERON:0002298,2.63e-15,6;UBERON:0002680,1.28e-14,9;UBERON:0001895,1.28e-14,9;UBERON:0010092,1.28e-14,9;UBERON:0000988,2.59e-12,3;UBERON:0002021,5.39e-12,5;UBERON:0001870,1.60e-11,3;UBERON:0000349,2.94e-11,5;UBERON:0011216,9.22e-11,223;UBERON:0000025,3.64e-10,192;UBERON:0000125,1.21e-09,9;UBERON:0002308,1.21e-09,9;UBERON:0002148,1.15e-08,2;UBERON:0006331,1.15e-08,2;UBERON:0009662,1.15e-08,2;UBERON:0002771,1.39e-08,2;UBERON:0002702,1.61e-08,2;UBERON:0001954,4.75e-08,2;UBERON:0003022,4.75e-08,2;UBERON:0002421,4.75e-08,2;UBERON:0002600,4.75e-08,2;UBERON:0004111,2.15e-07,240;UBERON:0001872,3.46e-07,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0.783556884599516,0,0,0,0,0.990130823680373,0.994192127183747,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0.0764134057479513,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,0.434539556882471,0,0.486634870302636,0.283604451492204,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0.132409180813219,0,0,0,0,0.49333509683432,0.311211035399766,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0.822041490506354,0.161872944368132,0.140450806702248,0.61246251376468,0.245668634623536,1.34323515528495,0,0,0,0,0.336672227908132,0.375355559615893,0,0,0,0,0,0.358779271377724,0.640672166455702,0.211931901159562,0.300091096084402,0.721367704669072,0,0.558350568994769,0.675105328965065,0.876933046450788,0.504867548488229,0.644349290496095,0.80823028409406,0.710019185033229,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0.252320850875628,0,0,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.277765335475589,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,1.14861935834114,2.85273810081437,0.289562613335158,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.702848489956279,1.20378439891088,0,1.03473071292505,0,0.184369168541703,0.347534457872331,0,0.343143423810856,0,0,0,0,0,0,0,0,0.841980283299221,0,0,0.160853921143607,0,0.308419387605311,0,0.328508624055237,0,0.116210378459959,0,0,0.460404944679482,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0,0,0.457847324091717,0.742585499285292,0,0,0,0.386682873168488,0.308097234229289,0,0,0.644521469209642,0.290033387828457,0,0.267096106940212,0.495854746082934,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0.55597265731176,0.143124886741991,0,0.632758849437452,0.190630193923825,0,1.28381696410176,0,0,0,0,0,0,0,0,0,0,0,0.545999645631943,0.282810863907425,0,0,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0.294747123039363,0,1.41904425628239,0.422215270595328,0.329294892959902,0.379473173765715,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.355709216742071,0.159426272728822,0.59873811429845,0.383010740264733,0,0,1.40398589056729,0.456469358066384,0.626719583092093,0,0.169291777801603,0,0,0,0,0,0.671028323677248,0.166849141711909,0,0.556812347790485,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0.23874448473769,0,0,0.994147647766298,1.54736358051564,0.445234820091624,0.16480387422676,0,0,0,0,0.409074730008619,0.492339221844278,0.622079175323615,0,0.716084698702437,0.511572370226872,0.0986434056369336,0,1.11136990144637,0,2.69027484669369,0,0.7812832832557,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0.344743373241465,0.291604613383254,0,0.885741385813839,1.68835014075571,4.5774520895125,3.53853631779919,1.18219047581419,1.53569778007781,0.21787692703798,0,0.153900517007594,0.113942055847001,0,0.359030577639089,0,0,0.274792780205587,1.06606955203727,0,0.784901281975124,0,0,0.19606253431774,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0.313265848516366,0.404406797884062,0,1.40558667435203,0,0.391329237864179,0,0,0,0,0.379119477770928,0,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0.489961987071888,0,0.17472666824203,0.171986032471617,0.19351266257817,0,0.0821154570532092,0.193978032976839,0.0882561266915003,0,0.137041924646751,0,1.26621591911757,0,0.480952921509202,0.213452994739353,0.19980960958213,0,0.229073192331831,0.171594997861965,0.14405479798815,0.99402028452346,0,0.135904206073614,0,0.101998217636322,0.288950589901519,1.20084057741958,0.547621515567972,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0.360299883542404,1.16495949527454,0,0,0,0.295282444544246,0.254019996197353,2.38568906942791,1.22583065500418,0,0.412618309791701,0,0.449947783103001,0,0.546746009922222,0,0,0,0.316801009558219,0.537862017998534,0.575745591958336,0,0,0,0,0.864221491201268,0.326587360109409,0,0.656740165994712,0.511164065356265,0.79318464064088,0,0,5.04203529810047,2.24795422962573,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,1.25643277000187,2.65820453990096,3.78281421196086,2.253436752717,0.573409195690071,1.10929051536852,1.98708489412427,0,0.124980407962107,0,0,0.235265819698172,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| ||
|short_description=p3@BEND6 | |||
}} | }} |
Latest revision as of 10:26, 19 September 2015
Short description: | p3@BEND6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BEND6_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000370745_5end |
EntrezGene: | BEND6 |
HGNC: | 20871 |
UniProt: | Q5SZK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data