FFCP PHASE1:Hg19::chr15:81489213..81489228,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3603 | |EntrezGene=3603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5980 | |HGNC=5980 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7Z5,Q14005 | |UniProt=F8W7Z5,Q14005 | ||
|association_with_transcript=0bp_to_ENST00000355368,ENST00000394660,ENST00000559383,NM_001172128,uc002bgg.2,uc002bgh.3_5end | |association_with_transcript=0bp_to_ENST00000355368,ENST00000394660,ENST00000559383,NM_001172128,uc002bgg.2,uc002bgh.3_5end | ||
|cluster_id=chr15:81489213..81489228,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_7_at_IL16_5end | |description=CAGE_peak_7_at_IL16_5end | ||
|id=chr15:81489213..81489228,+ | |id=chr15:81489213..81489228,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.33e-118;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!5.76e-46!12;UBERON:0002028!5.76e-46!12;UBERON:0007277!5.76e-46!12;UBERON:0004732!1.97e-42!13;UBERON:0003076!8.93e-37!15;UBERON:0003057!8.93e-37!15;UBERON:0002680!7.07e-28!9;UBERON:0001895!7.07e-28!9;UBERON:0010092!7.07e-28!9;UBERON:0002037!4.91e-24!6;UBERON:0006215!4.91e-24!6;UBERON:0001896!1.96e-21!3;UBERON:0005290!1.96e-21!3;UBERON:0010096!1.96e-21!3;UBERON:0007023!4.42e-18!115;UBERON:0002298!7.02e-18!8;UBERON:0005743!1.76e-16!86;UBERON:0002022!3.07e-16!1;UBERON:0000073!7.20e-15!94;UBERON:0001016!7.20e-15!94;UBERON:0001017!5.14e-14!82;UBERON:0003075!1.69e-13!86;UBERON:0007284!1.69e-13!86;UBERON:0000955!3.33e-13!69;UBERON:0006238!3.33e-13!69;UBERON:0002346!7.19e-13!90;UBERON:0001049!1.45e-12!57;UBERON:0005068!1.45e-12!57;UBERON:0006241!1.45e-12!57;UBERON:0007135!1.45e-12!57;UBERON:0002616!3.93e-12!59;UBERON:0000033!4.11e-09!123;UBERON:0002360!4.70e-09!2;UBERON:0000094!4.70e-09!2;UBERON:0007645!4.70e-09!2;UBERON:0000153!1.18e-08!129;UBERON:0007811!1.18e-08!129;UBERON:0004121!5.90e-08!169;UBERON:0000924!9.46e-08!173;UBERON:0006601!9.46e-08!173;UBERON:0000063!2.56e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.15e-60;6!UBERON:0004733;4.61e-53;12!UBERON:0002028;4.61e-53;12!UBERON:0004732;4.63e-49;13!UBERON:0002680;2.91e-40;9!UBERON:0001895;2.91e-40;9!UBERON:0002360;6.96e-21;2!UBERON:0000094;6.96e-21;2!UBERON:0010743;6.96e-21;2!UBERON:0001896;1.83e-14;3!UBERON:0005290;1.83e-14;3!UBERON:0000073;2.25e-09;53!UBERON:0002616;2.25e-09;53!UBERON:0001016;7.27e-09;83!UBERON:0001017;1.34e-08;75!UBERON:0002298;6.78e-08;6!UBERON:0000955;6.15e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.15e-60,6;UBERON:0006215,8.15e-60,6;UBERON:0004733,4.61e-53,12;UBERON:0002028,4.61e-53,12;UBERON:0007277,4.61e-53,12;UBERON:0004732,4.63e-49,13;UBERON:0003076,1.18e-42,15;UBERON:0003057,1.18e-42,15;UBERON:0002680,2.91e-40,9;UBERON:0001895,2.91e-40,9;UBERON:0010092,2.91e-40,9;UBERON:0002360,6.96e-21,2;UBERON:0000094,6.96e-21,2;UBERON:0010743,6.96e-21,2;UBERON:0001896,1.83e-14,3;UBERON:0005290,1.83e-14,3;UBERON:0010096,1.83e-14,3;UBERON:0001017,1.45e-12,81;UBERON:0000073,1.93e-12,53;UBERON:0002616,1.93e-12,53;UBERON:0001049,7.99e-12,56;UBERON:0005068,7.99e-12,56;UBERON:0006241,7.99e-12,56;UBERON:0007135,7.99e-12,56;UBERON:0001016,2.13e-11,89;UBERON:0000955,9.44e-10,68;UBERON:0006238,9.44e-10,68;UBERON:0007023,2.58e-09,114;UBERON:0003075,2.54e-08,82;UBERON:0007284,2.54e-08,82;UBERON:0002346,5.76e-08,86;UBERON:0002298,6.78e-08,6 | |||
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|short_description=p7@IL16 | |short_description=p7@IL16 | ||
}} | }} |
Latest revision as of 10:25, 19 September 2015
Short description: | p7@IL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IL16_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000355368, ENST00000394660, ENST00000559383, NM_001172128, uc002bgg.2, uc002bgh.3_5end |
EntrezGene: | IL16 |
HGNC: | 5980 |
UniProt: | F8W7Z5Q14005 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.15e-60 | 6 |
rhombic lip | 8.15e-60 | 6 |
segmental subdivision of hindbrain | 4.61e-53 | 12 |
hindbrain | 4.61e-53 | 12 |
presumptive hindbrain | 4.61e-53 | 12 |
segmental subdivision of nervous system | 4.63e-49 | 13 |
posterior neural tube | 1.18e-42 | 15 |
chordal neural plate | 1.18e-42 | 15 |
regional part of metencephalon | 2.91e-40 | 9 |
metencephalon | 2.91e-40 | 9 |
future metencephalon | 2.91e-40 | 9 |
meninx | 6.96e-21 | 2 |
membrane organ | 6.96e-21 | 2 |
meningeal cluster | 6.96e-21 | 2 |
medulla oblongata | 1.83e-14 | 3 |
myelencephalon | 1.83e-14 | 3 |
future myelencephalon | 1.83e-14 | 3 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 1.93e-12 | 53 |
regional part of brain | 1.93e-12 | 53 |
neural tube | 7.99e-12 | 56 |
neural rod | 7.99e-12 | 56 |
future spinal cord | 7.99e-12 | 56 |
neural keel | 7.99e-12 | 56 |
nervous system | 2.13e-11 | 89 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
adult organism | 2.58e-09 | 114 |
neural plate | 2.54e-08 | 82 |
presumptive neural plate | 2.54e-08 | 82 |
neurectoderm | 5.76e-08 | 86 |
brainstem | 6.78e-08 | 6 |