FFCP PHASE1:Hg19::chr1:192605206..192605228,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6003 | |EntrezGene=6003 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9995 | |HGNC=9995 | ||
|TSSclassifier=strong | |||
|UniProt=O14921 | |UniProt=O14921 | ||
|association_with_transcript=-39bp_to_NM_002927,NM_144766_5end | |association_with_transcript=-39bp_to_NM_002927,NM_144766_5end | ||
|cluster_id=chr1:192605206..192605228,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_2_at_RGS13_5end | |description=CAGE_peak_2_at_RGS13_5end | ||
|id=chr1:192605206..192605228,+ | |id=chr1:192605206..192605228,+ | ||
|ontology_enrichment_celltype=CL:0002274!5.01e-20!5;CL:0000457!5.01e-20!5;CL:0002191!5.01e-20!5;CL:0000097!5.01e-20!5;CL:0000831!5.01e-20!5;CL:0002028!5.01e-20!5;CL:0000163!6.00e-11!9 | |ontology_enrichment_celltype=CL:0002274!5.01e-20!5;CL:0000457!5.01e-20!5;CL:0002191!5.01e-20!5;CL:0000097!5.01e-20!5;CL:0000831!5.01e-20!5;CL:0002028!5.01e-20!5;CL:0000163!6.00e-11!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.30e-99;5!CL:0000163;1.97e-55;9!CL:0000151;6.11e-13;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.30e-99,5;CL:0002028,2.30e-99,5;CL:0000163,1.97e-55,9;CL:0000151,4.57e-14,36;CL:0000839,1.34e-07,66;CL:0000557,1.73e-07,67;CL:0000766,5.60e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006242;6.98e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.89e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.35e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.09e-14!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;6.98e-21;1!UBERON:0006518;6.98e-21;1!UBERON:0008949;6.98e-21;1!UBERON:0000101;6.98e-21;1!UBERON:0002167;6.98e-21;1!UBERON:0002110;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,7.72e-21,1;UBERON:0006518,7.72e-21,1;UBERON:0008949,7.72e-21,1;UBERON:0000101,7.72e-21,1;UBERON:0002167,7.72e-21,1;UBERON:0002110,8.29e-08,3;UBERON:0006242,8.29e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0.154934401160603,0.710846162437108,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,200.513937823649,46.1373794229305,146.580977687326,202.776774457665,124.222554491558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0.706049013532002,0.677942222341597,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,0.157204305099666,1.24271716604159,0.496166021811951,0,1.46151118057075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97143852804142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549451649953598,0,0,0,0,0,0.142953088353313,0,3.48724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0.980593287015622,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.426467963801962,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0.154934401160603,0.710846162437108,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,200.513937823649,46.1373794229305,146.580977687326,202.776774457665,124.222554491558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0.706049013532002,0.677942222341597,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,0.157204305099666,1.24271716604159,0.496166021811951,0,1.46151118057075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97143852804142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549451649953598,0,0,0,0,0,0.142953088353313,0,3.48724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0.980593287015622,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.426467963801962,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p2@RGS13 | |short_description=p2@RGS13 | ||
}} | }} |
Latest revision as of 10:19, 19 September 2015
Short description: | p2@RGS13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RGS13_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -39bp_to_NM_002927, NM_144766_5end |
EntrezGene: | RGS13 |
HGNC: | 9995 |
UniProt: | O14921 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.30e-99 | 5 |
basophil mast progenitor cell | 2.30e-99 | 5 |
endocrine cell | 1.97e-55 | 9 |
secretory cell | 4.57e-14 | 36 |
myeloid lineage restricted progenitor cell | 1.34e-07 | 66 |
granulocyte monocyte progenitor cell | 1.73e-07 | 67 |
myeloid leukocyte | 5.60e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 7.72e-21 | 1 |
right lung lobe | 7.72e-21 | 1 |
lower lobe of lung | 7.72e-21 | 1 |
lobe of lung | 7.72e-21 | 1 |
right lung | 7.72e-21 | 1 |
gallbladder | 8.29e-08 | 3 |
gall bladder primordium | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.35e-11 | 2 |