FFCP PHASE1:Hg19::chr10:79258690..79258721,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:79258690..79258721,-
|short_description=p21@KCNMA1
|description=CAGE_peak_21_at_KCNMA1_5end
|association_with_transcript=6bp_to_AK124355_5end
|EntrezGene...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3778 | |EntrezGene=3778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6284 | |HGNC=6284 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_AK124355_5end | |||
|cluster_id=chr10:79258690..79258721,- | |||
|coexpression_cluster_id=C1099 | |||
|description=CAGE_peak_21_at_KCNMA1_5end | |||
|id=chr10:79258690..79258721,- | |||
|ontology_enrichment_celltype=CL:0002619!4.51e-14!3 | |||
|ontology_enrichment_celltype_v019=CL:0002619;2.81e-34;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.81e-34,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;7.62e-26;1!UBERON:0004872;3.79e-15;7!UBERON:0007297;1.21e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.26e-24!115;UBERON:0002106!2.44e-13!3;UBERON:0004854!2.44e-13!3;UBERON:0009034!2.44e-13!3;UBERON:0002095!2.44e-13!3;UBERON:0004782!2.44e-13!3;UBERON:0003281!2.44e-13!3;UBERON:0009664!2.44e-13!3;UBERON:0002296!2.44e-13!3;UBERON:0005602!2.44e-13!3;UBERON:0001179!2.44e-13!3;UBERON:0006293!2.44e-13!3;UBERON:0006947!3.25e-13!3;UBERON:0004054!3.25e-13!3;UBERON:0006331!1.72e-12!3;UBERON:0001049!3.02e-10!57;UBERON:0005068!3.02e-10!57;UBERON:0006241!3.02e-10!57;UBERON:0007135!3.02e-10!57;UBERON:0005904!5.06e-10!4;UBERON:0004177!8.52e-10!7;UBERON:0002148!9.33e-09!2;UBERON:0009662!9.33e-09!2;UBERON:0002020!1.44e-07!34;UBERON:0003528!1.44e-07!34;UBERON:0002780!1.58e-07!41;UBERON:0001890!1.58e-07!41;UBERON:0006240!1.58e-07!41;UBERON:0002308!2.44e-07!9;UBERON:0000125!2.44e-07!9;UBERON:0003080!2.60e-07!42;UBERON:0002616!5.70e-07!59;UBERON:0003075!7.48e-07!86;UBERON:0007284!7.48e-07!86;UBERON:0002331!9.54e-07!10;UBERON:0000358!9.54e-07!10;UBERON:0000307!9.54e-07!10;UBERON:0000091!9.54e-07!10;UBERON:0000087!9.54e-07!10;UBERON:0007806!9.54e-07!10;UBERON:0008780!9.54e-07!10;UBERON:0005728!9.54e-07!10;UBERON:0005743!9.68e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.69e-34;3!UBERON:0000998;7.62e-26;1!UBERON:0006868;7.62e-26;1!UBERON:0004177;8.98e-21;5!UBERON:0005057;8.98e-21;5!UBERON:0006947;1.53e-09;3!UBERON:0004054;1.53e-09;3!UBERON:0005904;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.10e-34,3;UBERON:0004854,9.10e-34,3;UBERON:0009034,9.10e-34,3;UBERON:0002095,9.10e-34,3;UBERON:0004782,9.10e-34,3;UBERON:0003281,9.10e-34,3;UBERON:0009664,9.10e-34,3;UBERON:0002296,9.10e-34,3;UBERON:0005602,9.10e-34,3;UBERON:0001179,9.10e-34,3;UBERON:0006293,9.10e-34,3;UBERON:0000998,4.61e-26,1;UBERON:0006868,4.61e-26,1;UBERON:0003887,3.09e-19,12;UBERON:0004177,4.07e-15,7;UBERON:0005057,4.07e-15,7;UBERON:0000945,2.34e-13,8;UBERON:0010039,2.34e-13,8;UBERON:0006947,1.30e-09,3;UBERON:0004054,1.30e-09,3;UBERON:0004457,3.14e-09,12;UBERON:0000042,3.14e-09,12;UBERON:0005172,9.09e-08,54;UBERON:0005173,9.09e-08,54;UBERON:0005904,1.59e-07,4;UBERON:0002417,5.02e-07,60;UBERON:0000916,5.02e-07,60;UBERON:0002405,7.82e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.15005590751826,13.9274276388161,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.247127877893006,0.417687798021821,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.747511887973863,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,1.04617282831313,0,0,0,0,0.691259661814092,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.102662806856247,0,0,0.467878926924211,0,0,0,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0.594092800654172,0,0,1.12780701575824,2.57831551894309,0.0999411559249289,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.31037357147929,0,0.0636471582781649,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.15005590751826,13.9274276388161,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.247127877893006,0.417687798021821,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.747511887973863,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,1.04617282831313,0,0,0,0,0.691259661814092,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.102662806856247,0,0,0.467878926924211,0,0,0,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0.594092800654172,0,0,1.12780701575824,2.57831551894309,0.0999411559249289,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.31037357147929,0,0.0636471582781649,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p21@KCNMA1 | |||
}} | }} |
Latest revision as of 10:13, 19 September 2015
Short description: | p21@KCNMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_KCNMA1_5end |
Coexpression cluster: | C1099_CD14_Macrophage_plasma_lymph_Mast_colon_spleen |
Association with transcript: | 6bp_to_AK124355_5end |
EntrezGene: | KCNMA1 |
HGNC: | 6284 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.81e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 9.10e-34 | 3 |
gastrointestinal system mesentery | 9.10e-34 | 3 |
stomach region | 9.10e-34 | 3 |
mesentery | 9.10e-34 | 3 |
gastrointestinal system serosa | 9.10e-34 | 3 |
mesentery of stomach | 9.10e-34 | 3 |
gut mesentery | 9.10e-34 | 3 |
dorsal mesentery | 9.10e-34 | 3 |
dorsal mesogastrium | 9.10e-34 | 3 |
peritoneal cavity | 9.10e-34 | 3 |
spleen primordium | 9.10e-34 | 3 |
seminal vesicle | 4.61e-26 | 1 |
seminal fluid secreting gland | 4.61e-26 | 1 |
intraembryonic coelom | 3.09e-19 | 12 |
hemopoietic organ | 4.07e-15 | 7 |
immune organ | 4.07e-15 | 7 |
stomach | 2.34e-13 | 8 |
food storage organ | 2.34e-13 | 8 |
male genital duct | 1.30e-09 | 3 |
internal male genitalia | 1.30e-09 | 3 |
cavity lining | 3.14e-09 | 12 |
serous membrane | 3.14e-09 | 12 |
abdomen element | 9.09e-08 | 54 |
abdominal segment element | 9.09e-08 | 54 |
duct of male reproductive system | 1.59e-07 | 4 |
abdominal segment of trunk | 5.02e-07 | 60 |
abdomen | 5.02e-07 | 60 |
immune system | 7.82e-07 | 93 |