FFCP PHASE1:Hg19::chr2:20101701..20101752,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130502 | |EntrezGene=130502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32954 | |HGNC=32954 | ||
|TSSclassifier=strong | |||
|UniProt=Q5I0X7,B5MCJ1 | |UniProt=Q5I0X7,B5MCJ1 | ||
|association_with_transcript=0bp_to_ENST00000333610,ENST00000402414,NM_001008237,uc002rdg.2_5end | |association_with_transcript=0bp_to_ENST00000333610,ENST00000402414,NM_001008237,uc002rdg.2_5end | ||
|cluster_id=chr2:20101701..20101752,- | |||
|description=CAGE_peak_2_at_TTC32_5end | |description=CAGE_peak_2_at_TTC32_5end | ||
|id=chr2:20101701..20101752,- | |id=chr2:20101701..20101752,- | ||
|ontology_enrichment_celltype=CL:0000037!5.83e-31!172;CL:0000566!5.83e-31!172;CL:0000988!6.72e-30!182;CL:0002032!1.77e-28!165;CL:0000837!1.77e-28!165;CL:0000738!7.44e-25!140;CL:0002087!3.64e-22!119;CL:0002031!3.83e-22!124;CL:0000860!9.83e-21!45;CL:0000763!2.78e-19!112;CL:0000049!2.78e-19!112;CL:0002057!4.44e-19!42;CL:0000766!4.95e-16!76;CL:0000839!5.82e-14!70;CL:0002009!1.66e-13!65;CL:0002194!2.06e-13!63;CL:0000576!2.06e-13!63;CL:0000040!2.06e-13!63;CL:0000559!2.06e-13!63;CL:0000557!6.14e-13!71;CL:0000542!1.11e-08!53;CL:0000051!1.11e-08!53;CL:0000838!1.82e-08!52 | |ontology_enrichment_celltype=CL:0000037!5.83e-31!172;CL:0000566!5.83e-31!172;CL:0000988!6.72e-30!182;CL:0002032!1.77e-28!165;CL:0000837!1.77e-28!165;CL:0000738!7.44e-25!140;CL:0002087!3.64e-22!119;CL:0002031!3.83e-22!124;CL:0000860!9.83e-21!45;CL:0000763!2.78e-19!112;CL:0000049!2.78e-19!112;CL:0002057!4.44e-19!42;CL:0000766!4.95e-16!76;CL:0000839!5.82e-14!70;CL:0002009!1.66e-13!65;CL:0002194!2.06e-13!63;CL:0000576!2.06e-13!63;CL:0000040!2.06e-13!63;CL:0000559!2.06e-13!63;CL:0000557!6.14e-13!71;CL:0000542!1.11e-08!53;CL:0000051!1.11e-08!53;CL:0000838!1.82e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.12e-16;33!CL:0002057;2.12e-16;33!CL:0000473;2.25e-11;39!CL:0000234;2.25e-11;39!CL:0000576;7.78e-11;48!CL:0000766;1.27e-08;69!CL:0000763;7.89e-08;100!CL:0002087;9.90e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.43e-30,168;CL:0000988,1.91e-29,177;CL:0002032,1.02e-27,161;CL:0000837,1.02e-27,161;CL:0000738,3.97e-24,136;CL:0002087,1.84e-21,115;CL:0002031,1.95e-21,120;CL:0000860,3.56e-19,42;CL:0002057,3.56e-19,42;CL:0000763,1.12e-18,108;CL:0000049,1.12e-18,108;CL:0000473,2.13e-16,48;CL:0000234,2.13e-16,48;CL:0000766,1.78e-15,72;CL:0000839,2.11e-13,66;CL:0002009,5.93e-13,61;CL:0002194,7.32e-13,59;CL:0000576,7.32e-13,59;CL:0000040,7.32e-13,59;CL:0000559,7.32e-13,59;CL:0000557,2.26e-12,67;CL:0000542,1.26e-08,53;CL:0000051,1.26e-08,53;CL:0000838,2.06e-08,52 | |||
|ontology_enrichment_development_v019=CL:0002057;1.87e-14;42 | |||
|ontology_enrichment_disease=DOID:305!5.43e-08!106;DOID:162!1.32e-07!235;DOID:14566!7.29e-07!239 | |ontology_enrichment_disease=DOID:305!5.43e-08!106;DOID:162!1.32e-07!235;DOID:14566!7.29e-07!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.30e-08,106;DOID:162,1.79e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.46e-17!102;UBERON:0003061!2.46e-17!102;UBERON:0002193!5.99e-17!112;UBERON:0002371!4.57e-12!80;UBERON:0002405!6.77e-11!115;UBERON:0001474!3.67e-10!86;UBERON:0004765!1.66e-07!101;UBERON:0001434!1.66e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.80e-17,98;UBERON:0003061,9.80e-17,98;UBERON:0002193,3.11e-16,108;UBERON:0002405,9.27e-12,93;UBERON:0002371,1.76e-11,76;UBERON:0001474,1.42e-09,82;UBERON:0004765,8.78e-08,90 | |||
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| ||
|short_description=p2@TTC32 | |short_description=p2@TTC32 | ||
}} | }} |
Latest revision as of 10:02, 19 September 2015
Short description: | p2@TTC32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TTC32_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000333610, ENST00000402414, NM_001008237, uc002rdg.2_5end |
EntrezGene: | TTC32 |
HGNC: | 32954 |
UniProt: | Q5I0X7B5MCJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.43e-30 | 168 |
hematopoietic cell | 1.91e-29 | 177 |
hematopoietic oligopotent progenitor cell | 1.02e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-27 | 161 |
leukocyte | 3.97e-24 | 136 |
nongranular leukocyte | 1.84e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 1.95e-21 | 120 |
classical monocyte | 3.56e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.56e-19 | 42 |
myeloid cell | 1.12e-18 | 108 |
common myeloid progenitor | 1.12e-18 | 108 |
defensive cell | 2.13e-16 | 48 |
phagocyte | 2.13e-16 | 48 |
myeloid leukocyte | 1.78e-15 | 72 |
myeloid lineage restricted progenitor cell | 2.11e-13 | 66 |
macrophage dendritic cell progenitor | 5.93e-13 | 61 |
monopoietic cell | 7.32e-13 | 59 |
monocyte | 7.32e-13 | 59 |
monoblast | 7.32e-13 | 59 |
promonocyte | 7.32e-13 | 59 |
granulocyte monocyte progenitor cell | 2.26e-12 | 67 |
lymphocyte | 1.26e-08 | 53 |
common lymphoid progenitor | 1.26e-08 | 53 |
lymphoid lineage restricted progenitor cell | 2.06e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.80e-17 | 98 |
blood island | 9.80e-17 | 98 |
hemolymphoid system | 3.11e-16 | 108 |
immune system | 9.27e-12 | 93 |
bone marrow | 1.76e-11 | 76 |
bone element | 1.42e-09 | 82 |
skeletal element | 8.78e-08 | 90 |