FFCP PHASE2:Hg19::chr19:50381565..50381605,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:84335 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:28426 |TSScla...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=84335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=28426 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 09:37, 19 September 2015
Short description: | p4@AKT1S1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AKT1S1_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | 7bp_to_ENST00000482622_5end |
EntrezGene: | AKT1S1 |
HGNC: | 28426 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@AKT1S1 |
---|
0
10
20
30
40
50
60
70
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.58e-07 | 43 |
smooth muscle myoblast | 2.58e-07 | 43 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
---|---|---|
larynx | 3.82e-13 | 9 |
extraembryonic membrane | 1.12e-09 | 14 |
membranous layer | 1.12e-09 | 14 |
organ component layer | 3.45e-08 | 66 |
chorion | 2.81e-07 | 7 |
female reproductive organ | 3.99e-07 | 37 |
female reproductive system | 3.99e-07 | 37 |
multilaminar epithelium | 4.73e-07 | 83 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.47e-10 | 14 |
reproductive organ cancer | 5.29e-07 | 29 |
female reproductive organ cancer | 7.37e-07 | 27 |
Showing 1 to 3 of 3 entries