FFCP PHASE1:Hg19::chr11:65315433..65315460,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4054 | |EntrezGene=4054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6716 | |HGNC=6716 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-397bp_to_ENST00000527339_5end | |association_with_transcript=-397bp_to_ENST00000527339_5end | ||
|cluster_id=chr11:65315433..65315460,- | |||
|description=CAGE_peak_19_at_LTBP3_5end | |description=CAGE_peak_19_at_LTBP3_5end | ||
|id=chr11:65315433..65315460,- | |id=chr11:65315433..65315460,- | ||
|ontology_enrichment_celltype=CL:0000055!3.08e-07!180;CL:0000057!5.26e-07!75 | |ontology_enrichment_celltype=CL:0000055!3.08e-07!180;CL:0000057!5.26e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002579;2.94e-13;3!CL:1000306;1.81e-10;4!CL:0002547;1.81e-10;4!CL:0000650;2.09e-09;2!CL:1000500;2.09e-09;2!CL:1000618;2.09e-09;2!CL:1001318;2.09e-09;2!CL:0002173;2.09e-09;2!CL:0002334;1.39e-08;12!CL:0000153;4.14e-08;9!CL:0000447;4.14e-08;9!CL:0000214;2.93e-07;3!CL:0000327;2.95e-07;15 | |ontology_enrichment_celltype_v019=CL:0002579;2.94e-13;3!CL:1000306;1.81e-10;4!CL:0002547;1.81e-10;4!CL:0000650;2.09e-09;2!CL:1000500;2.09e-09;2!CL:1000618;2.09e-09;2!CL:1001318;2.09e-09;2!CL:0002173;2.09e-09;2!CL:0002334;1.39e-08;12!CL:0000153;4.14e-08;9!CL:0000447;4.14e-08;9!CL:0000214;2.93e-07;3!CL:0000327;2.95e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002579,3.59e-13,3;CL:1000306,2.73e-10,4;CL:0002547,2.73e-10,4;CL:0000057,3.17e-09,76;CL:0000650,5.34e-09,2;CL:1000500,5.34e-09,2;CL:1000618,5.34e-09,2;CL:1001318,5.34e-09,2;CL:0002173,5.34e-09,2;CL:0002334,1.16e-08,12;CL:0000153,4.92e-08,9;CL:0000447,4.92e-08,9;CL:0000214,2.94e-07,3;CL:0000327,3.17e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;8.60e-07;3!DOID:127;8.60e-07;3 | |ontology_enrichment_disease_v019=DOID:0060084;8.60e-07;3!DOID:127;8.60e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,5.66e-07,3;DOID:127,5.66e-07,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.40e-17;9!UBERON:0000042;2.40e-17;9!UBERON:0003688;9.14e-12;6!UBERON:0002358;9.14e-12;6!UBERON:0003684;9.14e-12;6!UBERON:0001178;9.14e-12;6!UBERON:0004797;1.81e-10;4!UBERON:0000415;1.81e-10;4!UBERON:0007240;1.81e-10;4!UBERON:0005742;1.81e-10;4!UBERON:0005734;1.81e-10;4!UBERON:0004664;1.81e-10;4!UBERON:0004663;1.81e-10;4!UBERON:0003891;4.58e-10;4!UBERON:0005406;8.57e-10;2!UBERON:0003567;2.09e-09;2!UBERON:0003838;2.09e-09;2!UBERON:0003586;2.09e-09;2!UBERON:0005169;2.09e-09;2!UBERON:0002321;2.09e-09;2!UBERON:0005215;2.09e-09;2!UBERON:0002303;2.09e-09;2!UBERON:0002319;2.09e-09;2!UBERON:0006915;2.93e-07;3!UBERON:0007616;2.93e-07;3!UBERON:0002217;2.93e-07;3!UBERON:0002018;2.93e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004457;2.40e-17;9!UBERON:0000042;2.40e-17;9!UBERON:0003688;9.14e-12;6!UBERON:0002358;9.14e-12;6!UBERON:0003684;9.14e-12;6!UBERON:0001178;9.14e-12;6!UBERON:0004797;1.81e-10;4!UBERON:0000415;1.81e-10;4!UBERON:0007240;1.81e-10;4!UBERON:0005742;1.81e-10;4!UBERON:0005734;1.81e-10;4!UBERON:0004664;1.81e-10;4!UBERON:0004663;1.81e-10;4!UBERON:0003891;4.58e-10;4!UBERON:0005406;8.57e-10;2!UBERON:0003567;2.09e-09;2!UBERON:0003838;2.09e-09;2!UBERON:0003586;2.09e-09;2!UBERON:0005169;2.09e-09;2!UBERON:0002321;2.09e-09;2!UBERON:0005215;2.09e-09;2!UBERON:0002303;2.09e-09;2!UBERON:0002319;2.09e-09;2!UBERON:0006915;2.93e-07;3!UBERON:0007616;2.93e-07;3!UBERON:0002217;2.93e-07;3!UBERON:0002018;2.93e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,8.18e-13,12;UBERON:0000042,8.18e-13,12;UBERON:0003688,1.02e-11,6;UBERON:0002358,1.02e-11,6;UBERON:0003684,1.02e-11,6;UBERON:0001178,1.02e-11,6;UBERON:0000415,2.73e-10,4;UBERON:0007240,2.73e-10,4;UBERON:0005742,2.73e-10,4;UBERON:0005734,2.73e-10,4;UBERON:0004664,2.73e-10,4;UBERON:0004663,2.73e-10,4;UBERON:0005406,5.67e-10,2;UBERON:0003891,1.35e-09,4;UBERON:0003567,5.34e-09,2;UBERON:0003838,5.34e-09,2;UBERON:0003586,5.34e-09,2;UBERON:0005169,5.34e-09,2;UBERON:0002321,5.34e-09,2;UBERON:0005215,5.34e-09,2;UBERON:0002303,5.34e-09,2;UBERON:0002319,5.34e-09,2;UBERON:0004923,2.63e-08,66;UBERON:0006915,2.94e-07,3;UBERON:0007616,2.94e-07,3;UBERON:0002217,2.94e-07,3;UBERON:0002018,2.94e-07,3 | |||
|phase1_expression=0.726713517082227,0,0.704772020479856,0,3.5756887554183,2.61701557230111,0,1.26343974685366,0.261185628199839,0,0,0,0.263766978228454,0.247532705920093,0,0,0.602694528023977,0,0,0.492484232307152,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,1.94826728407911,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0.144824403882799,0,0,0,0,1.00267582127178,0.724232594804119,0,1.45990461090791,0.189069634328136,0.665188192387692,0.263504357079378,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0,0,0,0,0.33472061276467,0.805658634218294,0,0.732186172644509,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,1.13967460498122,0,4.87622255272983,1.06400514659507,0,1.06748995729705,1.2333377420858,0,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,0,0.896692083310806,0,0.161872944368132,0,0,0.122834317311768,0.723280468230358,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0,0,0,0.179389635688862,0.427114777637135,0,0,0.309157587715317,0,1.30281799432113,0,0.194874010322397,0.252433774244115,0.184099797284599,2.58633690910099,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,2.94017422771084,0,0,0,0,0.122988438543114,0.686271241194102,0.109750285408626,0,0,0.185176890317059,0,1.03993478527958,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.264145302039678,0.207328115540772,0.288239906833923,0.12624243342638,0.063497894292169,1.52795370223311,0,0,0,0.300343057843917,0,0,0.43596006883328,0,0.129271715757778,0,0,1.06375246633948,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,2.1100756394171,0,1.09970290300263,0,0,0,0.239624855491583,2.29723871668228,0,0,0.61642896765115,0,0,0.197030760201927,0.215627574859517,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0.117141414992713,0.601892199455438,4.5481500811197,3.10419213877515,0,0.184369168541703,0.347534457872331,0.195801157462741,0,0,0,0,0,0,0,1.48864684691266,0.153461973288062,0.280660094433074,1.79394808957981,1.02341449813341,1.12597744800525,1.48418066444991,0.154209693802656,0.355123450626254,0,0,0.581051892299796,0.604297247958111,1.40354529212299,0.184161977871793,0.459257792658427,0.364182336013434,2.09799063935079,0,0,0,0,0.105551628892876,0,0,0,0,1.08378575017541,1.00337954770971,0,0,0,0,0,0,1.64007322849853,0.650756789328606,0.103041011647722,0,0,0,0,0,0.290012154876366,0.308097234229289,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,1.25924938732256,0,0,0,0,1.11194531462352,0.143124886741991,0,0,0,0.255897791311334,0.42793898803392,0.95460974377781,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0.487426979262569,0,0.409499734223957,0.848432591722276,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,5.48879851773927,3.29294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0.556543525114529,0,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0.461701551022782,0,0,0,0.108647371922008,0,0.366390373607449,0,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0.189559738885464,0.150323419414493,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0.397429223405979,0.0633107959558787,0,0.0801588202515337,1.28071796843612,0.999048047910651,0.144090417154106,0.114536596165916,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0,0,0.837847203816763,0,0.717873024576814,0.399358000997982,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0.179287339332845,0,0.714695326373367,0,0,2.71499800876856,0,1.63293680054705,0,0,0,0.226624183040251,0.439656701034247,0,0,0,0,0,0,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0,0.606596470166591,0.570930667089935,0.470531639396343,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0.457680136793847,1.05861646634267,0.15543720058278,0,0,0.449803112163605,0,0.414706207840855,0,2.08698024724694,0.601030435988874,1.90402606084398,0,0,0.107410557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| ||
|short_description=p19@LTBP3 | |short_description=p19@LTBP3 | ||
}} | }} |
Latest revision as of 09:35, 19 September 2015
Short description: | p19@LTBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_LTBP3_5end |
Coexpression cluster: | NA |
Association with transcript: | -397bp_to_ENST00000527339_5end |
EntrezGene: | LTBP3 |
HGNC: | 6716 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 3.59e-13 | 3 |
fibroblast of tunica adventitia of artery | 2.73e-10 | 4 |
fibroblast of the aortic adventitia | 2.73e-10 | 4 |
fibroblast | 3.17e-09 | 76 |
mesangial cell | 5.34e-09 | 2 |
kidney interstitial cell | 5.34e-09 | 2 |
juxtaglomerular complex cell | 5.34e-09 | 2 |
renal interstitial pericyte | 5.34e-09 | 2 |
extraglomerular mesangial cell | 5.34e-09 | 2 |
preadipocyte | 1.16e-08 | 12 |
GAG secreting cell | 4.92e-08 | 9 |
carbohydrate secreting cell | 4.92e-08 | 9 |
synovial cell | 2.94e-07 | 3 |
extracellular matrix secreting cell | 3.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 8.18e-13 | 12 |
serous membrane | 8.18e-13 | 12 |
omentum | 1.02e-11 | 6 |
peritoneum | 1.02e-11 | 6 |
abdominal cavity | 1.02e-11 | 6 |
visceral peritoneum | 1.02e-11 | 6 |
artery wall | 2.73e-10 | 4 |
tunica adventitia of artery | 2.73e-10 | 4 |
adventitia | 2.73e-10 | 4 |
tunica adventitia of blood vessel | 2.73e-10 | 4 |
aorta tunica adventitia | 2.73e-10 | 4 |
aorta wall | 2.73e-10 | 4 |
perirenal fat | 5.67e-10 | 2 |
stroma | 1.35e-09 | 4 |
abdomen connective tissue | 5.34e-09 | 2 |
abdominal segment connective tissue | 5.34e-09 | 2 |
trunk connective tissue | 5.34e-09 | 2 |
interstitial tissue | 5.34e-09 | 2 |
extraglomerular mesangium | 5.34e-09 | 2 |
kidney interstitium | 5.34e-09 | 2 |
juxtaglomerular apparatus | 5.34e-09 | 2 |
mesangium | 5.34e-09 | 2 |
organ component layer | 2.63e-08 | 66 |
stratified squamous epithelium | 2.94e-07 | 3 |
layer of synovial tissue | 2.94e-07 | 3 |
synovial joint | 2.94e-07 | 3 |
synovial membrane of synovial joint | 2.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 5.66e-07 | 3 |
leiomyoma | 5.66e-07 | 3 |