FFCP PHASE1:Hg19::chr12:56414795..56414836,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64375 | |EntrezGene=64375 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13179 | |HGNC=13179 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9S4,F8VW19 | |UniProt=G5E9S4,F8VW19 | ||
|association_with_transcript=0bp_to_ENST00000431367,ENST00000551103_5end | |association_with_transcript=0bp_to_ENST00000431367,ENST00000551103_5end | ||
|cluster_id=chr12:56414795..56414836,+ | |||
|description=CAGE_peak_4_at_IKZF4_5end | |description=CAGE_peak_4_at_IKZF4_5end | ||
|id=chr12:56414795..56414836,+ | |id=chr12:56414795..56414836,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.90e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.88e-20!115;UBERON:0005743!1.14e-18!86;UBERON:0000073!1.73e-18!94;UBERON:0001016!1.73e-18!94;UBERON:0001017!5.95e-17!82;UBERON:0001049!6.54e-17!57;UBERON:0005068!6.54e-17!57;UBERON:0006241!6.54e-17!57;UBERON:0007135!6.54e-17!57;UBERON:0002616!3.18e-16!59;UBERON:0003075!1.83e-15!86;UBERON:0007284!1.83e-15!86;UBERON:0002346!8.73e-14!90;UBERON:0003056!1.12e-13!61;UBERON:0000955!3.05e-13!69;UBERON:0006238!3.05e-13!69;UBERON:0003080!3.59e-13!42;UBERON:0002780!1.38e-12!41;UBERON:0001890!1.38e-12!41;UBERON:0006240!1.38e-12!41;UBERON:0002020!1.56e-10!34;UBERON:0003528!1.56e-10!34;UBERON:0001893!1.85e-10!34;UBERON:0001950!3.54e-10!20;UBERON:0002791!4.37e-10!33;UBERON:0001869!6.75e-10!32;UBERON:0002619!7.55e-10!22;UBERON:0000153!1.60e-09!129;UBERON:0007811!1.60e-09!129;UBERON:0000956!2.09e-09!25;UBERON:0000203!2.09e-09!25;UBERON:0000033!1.00e-08!123;UBERON:0004121!1.30e-08!169;UBERON:0000924!7.32e-08!173;UBERON:0006601!7.32e-08!173;UBERON:0000481!1.10e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;9.18e-12;49!UBERON:0002619;1.11e-08;22!UBERON:0001950;1.95e-08;20!UBERON:0000956;2.74e-07;25!UBERON:0000203;2.74e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.37e-08,22;UBERON:0011216,1.83e-08,223;UBERON:0001950,2.37e-08,20;UBERON:0001049,2.93e-08,56;UBERON:0005068,2.93e-08,56;UBERON:0006241,2.93e-08,56;UBERON:0007135,2.93e-08,56;UBERON:0003056,3.07e-08,61;UBERON:0000073,3.58e-08,53;UBERON:0002616,3.58e-08,53;UBERON:0003075,3.83e-08,82;UBERON:0007284,3.83e-08,82;UBERON:0002346,2.04e-07,86;UBERON:0001016,2.42e-07,89;UBERON:0002780,3.27e-07,41;UBERON:0001890,3.27e-07,41;UBERON:0003080,3.27e-07,41;UBERON:0006240,3.27e-07,41;UBERON:0000956,3.29e-07,25;UBERON:0000203,3.29e-07,25;UBERON:0007023,6.67e-07,114;UBERON:0001017,7.10e-07,81;UBERON:0001871,7.62e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0.866364470720326,0,0,0.602694528023977,0,0,0.984968464614303,0,0.313454721478088,0,0.410623275218653,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,2.8769239232215,2.30544635876191,3.31075121844019,0,0,0,0,0,0,0,0,0,5.27762080298746,3.78980949481101,3.83602275479425,0,0,0,2.00998932205395,3.65038042894141,4.34377689410233,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0.668745981562712,0.651844533267181,0.946895611469467,1.94826728407911,0.891283655081389,0.883817722424512,0.221533894583621,1.08321545506006,0.768547918354051,0.260118695119756,0.493313713811028,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0,0,0.637130828648193,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0,1.5905718941022,0.486634870302636,0.756278537312543,0.443458794925128,0.263504357079378,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.337834441449967,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,1.55605517699883,0.134710672069688,0.326923806226917,0.908144565869588,0.576175924479999,1.17160715916898,0,0.570471821544449,0,0,0,0.140450806702248,0,0.61417158655884,0,0,0,0,0,0.168336113954066,0.375355559615893,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0,0,0,0,0,1.45481451136931,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0,1.70763188581434,1.85541675650079,2.67246068599892,4.45742536566093,4.54177531576131,1.82488679537915,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,1.26755034821831,0,1.18157981336281,0,0.368965315629341,0.171567810298526,0,0,0,0,1.62904152655162,0,1.44331342025273,1.62302566965108,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,1.74384027533312,0.1466765716419,0,0,0,0.797814349754612,0,0.771622122786426,0,1.0656887160644,1.00084595560703,10.3098105024374,0.823240336780769,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0.254094624222463,2.60279707715243,0,0.670065061337395,0.637938751653163,0,0,0,1.59498939234882,2.00068208423871,1.08506009479894,0,0.178428988797162,0,0,1.20378439891088,0,0,0,0.184369168541703,0.955719759148911,1.76221041716467,0.686286847621712,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0.328508624055237,0,0.116210378459959,0.846016147141356,0,0,0.229628896329213,0,0.655622074797121,0.902399225814824,0.231046011313244,0.784349769176855,0,0.527758144464379,0,0,0,0,0.812839312631559,2.50844886927427,0.254876273045038,0,0.223874754722178,0,0,1.28225062558195,1.64007322849853,0.325378394664303,0.309123034943167,0,0,0,0,0,0.193341436584244,0.308097234229289,0.921022048356777,0.137836572484531,2.0409846524972,1.74020032697074,0.255679882248303,0.712256285173899,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0.571890581771475,1.27948895655667,2.1396949401696,0.318203247925937,0,1.43897966066652,2.19629623788844,1.53156123049392,0,0,0,3.41343617362713,0.243713489631284,0,1.22849920267187,0.565621727814851,0,0,0,0,1.15755106853338,2.62357900818653,0,0.30982349809975,0,0.860468113224309,0.196498082026242,0,0,0,0,0,2.44954304171488,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0.199579371432817,0.383010740264733,0,0,0.561594356226918,0,0,5.01268954180134,0.338583555603207,2.40882112655549,1.00899853595524,0,1.71752672377882,0,0.223676107892416,0,1.17232857241224,0,0,0,2.99764771198038,0,0,0.439524537815682,0,4.79206552393157,0,0,0,0,0.994147647766298,1.54736358051564,0,0,0.422250816255987,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,1.38100767891707,2.3948309234694,0,0.969332746095218,0.371072392647405,0,0,0,2.17499872630438,0,0,0,0,0,0.173624994933292,0,1.5677537021303,0,2.10100593869327,1.18219047581419,0.438770794307945,0,0,2.84715956464049,0,0,0.0897576444097721,0,0.638002319463839,0.183195186803725,0,0,2.19772358953035,0.166211681900156,9.02382642468723,9.4110016472515,8.05543617484045,2.46679852541441,0,0,0,0.282706142867882,0,0.995261931078505,0.530745387020035,4.27721101453538,1.18608451472249,2.59484271787656,4.28129992972367,0.808813595768125,1.60515529459758,0,0,0,0,1.57833761139756,4.83962864194656,1.53036380815245,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.775912131907355,0,1.80784592624426,0,0,0.886351143382302,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,3.46740707881823,0,0.821432273351958,0,0,0,0.558564802544508,0.458320848023367,0,0.199679000498991,0,0,0.739018197353989,0,24.4641494007653,0.945398187686684,2.06039645952916,1.3480708770837,0,0,0,1.36203406111576,2.25054407851027,1.92555211236127,1.24632101408756,0.2249738915515,0,1.27574068981852,0,0.630445658393585,2.51782023047991,0,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| ||
|short_description=p4@IKZF4 | |short_description=p4@IKZF4 | ||
}} | }} |
Latest revision as of 09:32, 19 September 2015
Short description: | p4@IKZF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IKZF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000431367, ENST00000551103_5end |
EntrezGene: | IKZF4 |
HGNC: | 13179 |
UniProt: | G5E9S4F8VW19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.90e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.37e-08 | 22 |
organ system subdivision | 1.83e-08 | 223 |
neocortex | 2.37e-08 | 20 |
neural tube | 2.93e-08 | 56 |
neural rod | 2.93e-08 | 56 |
future spinal cord | 2.93e-08 | 56 |
neural keel | 2.93e-08 | 56 |
pre-chordal neural plate | 3.07e-08 | 61 |
regional part of nervous system | 3.58e-08 | 53 |
regional part of brain | 3.58e-08 | 53 |
neural plate | 3.83e-08 | 82 |
presumptive neural plate | 3.83e-08 | 82 |
neurectoderm | 2.04e-07 | 86 |
nervous system | 2.42e-07 | 89 |
regional part of forebrain | 3.27e-07 | 41 |
forebrain | 3.27e-07 | 41 |
anterior neural tube | 3.27e-07 | 41 |
future forebrain | 3.27e-07 | 41 |
cerebral cortex | 3.29e-07 | 25 |
pallium | 3.29e-07 | 25 |
adult organism | 6.67e-07 | 114 |
central nervous system | 7.10e-07 | 81 |
temporal lobe | 7.62e-07 | 6 |