FFCP PHASE1:Hg19::chr11:65268487..65268498,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=378938 | |EntrezGene=378938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29665 | |HGNC=29665 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=105bp_to_BC063689_5end | |association_with_transcript=105bp_to_BC063689_5end | ||
|cluster_id=chr11:65268487..65268498,+ | |||
|description=CAGE_peak_2_at_MALAT1_5end | |description=CAGE_peak_2_at_MALAT1_5end | ||
|id=chr11:65268487..65268498,+ | |id=chr11:65268487..65268498,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.44e-09!45;CL:0000738!9.50e-09!140;CL:0002087!1.04e-08!119;CL:0002057!2.74e-08!42;CL:0000766!6.35e-08!76;CL:0002031!8.94e-08!124;CL:0000839!3.09e-07!70;CL:0002194!3.76e-07!63;CL:0000576!3.76e-07!63;CL:0000040!3.76e-07!63;CL:0000559!3.76e-07!63;CL:0002009!7.36e-07!65 | |ontology_enrichment_celltype=CL:0000860!1.44e-09!45;CL:0000738!9.50e-09!140;CL:0002087!1.04e-08!119;CL:0002057!2.74e-08!42;CL:0000766!6.35e-08!76;CL:0002031!8.94e-08!124;CL:0000839!3.09e-07!70;CL:0002194!3.76e-07!63;CL:0000576!3.76e-07!63;CL:0000040!3.76e-07!63;CL:0000559!3.76e-07!63;CL:0002009!7.36e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.20e-09;33!CL:0002057;6.20e-09;33 | |ontology_enrichment_celltype_v019=CL:0000860;6.20e-09;33!CL:0002057;6.20e-09;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.74e-08,42;CL:0002057,2.74e-08,42;CL:0000738,1.04e-07,136;CL:0002087,1.26e-07,115;CL:0000473,5.16e-07,48;CL:0000234,5.16e-07,48;CL:0002031,9.20e-07,120;CL:0000766,9.62e-07,72 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!4.48e-10!143;DOID:162!2.52e-09!235;DOID:14566!2.65e-09!239 | |ontology_enrichment_disease=DOID:0050687!4.48e-10!143;DOID:162!2.52e-09!235;DOID:14566!2.65e-09!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.48e-10,143;DOID:162,2.52e-09,235;DOID:14566,2.65e-09,239 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@MALAT1 | |short_description=p2@MALAT1 | ||
}} | }} |
Latest revision as of 09:26, 19 September 2015
Short description: | p2@MALAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MALAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 105bp_to_BC063689_5end |
EntrezGene: | MALAT1 |
HGNC: | 29665 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.74e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.74e-08 | 42 |
leukocyte | 1.04e-07 | 136 |
nongranular leukocyte | 1.26e-07 | 115 |
defensive cell | 5.16e-07 | 48 |
phagocyte | 5.16e-07 | 48 |
hematopoietic lineage restricted progenitor cell | 9.20e-07 | 120 |
myeloid leukocyte | 9.62e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.48e-10 | 143 |
cancer | 2.52e-09 | 235 |
disease of cellular proliferation | 2.65e-09 | 239 |