FFCP PHASE1:Hg19::chr5:96077935..96077944,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=831 | |EntrezGene=831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1515 | |HGNC=1515 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAA8 | |UniProt=D6RAA8 | ||
|association_with_transcript=10bp_to_ENST00000503828_5end | |association_with_transcript=10bp_to_ENST00000503828_5end | ||
|cluster_id=chr5:96077935..96077944,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_37_at_CAST_5end | |description=CAGE_peak_37_at_CAST_5end | ||
|id=chr5:96077935..96077944,+ | |id=chr5:96077935..96077944,+ | ||
|ontology_enrichment_celltype=CL:0000764!4.31e-09!2;CL:0000765!4.31e-09!2;CL:0000050!4.31e-09!2;CL:0000038!4.31e-09!2;CL:0000558!4.31e-09!2;CL:0000547!4.31e-09!2;CL:0000549!4.31e-09!2;CL:0000550!4.31e-09!2;CL:0000552!4.31e-09!2;CL:0000815!3.23e-08!2;CL:0000792!3.23e-08!2;CL:0002677!3.23e-08!2 | |ontology_enrichment_celltype=CL:0000764!4.31e-09!2;CL:0000765!4.31e-09!2;CL:0000050!4.31e-09!2;CL:0000038!4.31e-09!2;CL:0000558!4.31e-09!2;CL:0000547!4.31e-09!2;CL:0000549!4.31e-09!2;CL:0000550!4.31e-09!2;CL:0000552!4.31e-09!2;CL:0000815!3.23e-08!2;CL:0000792!3.23e-08!2;CL:0002677!3.23e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;4.49e-30;2!CL:0000558;4.49e-30;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.49e-30,2;CL:0000765,4.49e-30,2;CL:0000050,4.49e-30,2;CL:0000038,4.49e-30,2;CL:0000558,4.49e-30,2;CL:0000547,4.49e-30,2;CL:0000549,4.49e-30,2;CL:0000550,4.49e-30,2;CL:0000552,4.49e-30,2;CL:0000763,1.18e-07,108;CL:0000049,1.18e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.15e-15;1!UBERON:0010226;2.38e-15;1 | |||
|ontology_enrichment_disease=DOID:1036!1.23e-16!8;DOID:8692!1.83e-12!31;DOID:1240!2.02e-09!39;DOID:2531!5.69e-08!51;DOID:0060083!5.69e-08!51 | |ontology_enrichment_disease=DOID:1036!1.23e-16!8;DOID:8692!1.83e-12!31;DOID:1240!2.02e-09!39;DOID:2531!5.69e-08!51;DOID:0060083!5.69e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:8552;1.15e-15;1!DOID:8692;2.67e-15;31!DOID:1240;3.85e-10;39!DOID:114;2.48e-08;2!DOID:1036;3.51e-08;8!DOID:2531;1.31e-07;51!DOID:0060083;1.31e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.59e-16,31;DOID:8552,1.34e-15,1;DOID:1240,8.28e-13,39;DOID:2531,9.88e-10,51;DOID:0060083,9.88e-10,51;DOID:114,2.15e-08,2;DOID:1036,3.51e-08,8 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;7.87e-20;3!UBERON:0002079;1.15e-15;1!UBERON:0002084;2.38e-15;1!UBERON:0002082;2.38e-15;1!UBERON:0007100;2.36e-09;25!UBERON:0002081;1.73e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,7.88e-20,3;UBERON:0002079,9.99e-16,1;UBERON:0002084,2.75e-15,1;UBERON:0002082,2.75e-15,1;UBERON:0010226,2.75e-15,1;UBERON:0007100,1.07e-08,27;UBERON:0002081,1.61e-08,2;UBERON:0010227,1.61e-08,2 | |||
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| ||
|short_description=p37@CAST | |short_description=p37@CAST | ||
}} | }} |
Latest revision as of 09:15, 19 September 2015
Short description: | p37@CAST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_CAST_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 10bp_to_ENST00000503828_5end |
EntrezGene: | CAST |
HGNC: | 1515 |
UniProt: | D6RAA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.49e-30 | 2 |
erythroblast | 4.49e-30 | 2 |
megakaryocyte-erythroid progenitor cell | 4.49e-30 | 2 |
erythroid progenitor cell | 4.49e-30 | 2 |
reticulocyte | 4.49e-30 | 2 |
proerythroblast | 4.49e-30 | 2 |
basophilic erythroblast | 4.49e-30 | 2 |
polychromatophilic erythroblast | 4.49e-30 | 2 |
orthochromatic erythroblast | 4.49e-30 | 2 |
myeloid cell | 1.18e-07 | 108 |
common myeloid progenitor | 1.18e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 7.88e-20 | 3 |
left cardiac atrium | 9.99e-16 | 1 |
heart left ventricle | 2.75e-15 | 1 |
cardiac ventricle | 2.75e-15 | 1 |
future cardiac ventricle | 2.75e-15 | 1 |
primary circulatory organ | 1.07e-08 | 27 |
cardiac atrium | 1.61e-08 | 2 |
future cardiac atrium | 1.61e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.59e-16 | 31 |
chronic myeloid leukemia | 1.34e-15 | 1 |
leukemia | 8.28e-13 | 39 |
hematologic cancer | 9.88e-10 | 51 |
immune system cancer | 9.88e-10 | 51 |
heart disease | 2.15e-08 | 2 |
chronic leukemia | 3.51e-08 | 8 |