FFCP PHASE1:Hg19::chr3:105085734..105085760,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=400 | |||
|TSSclassifier=strong | |||
|UniProt=Q13740 | |||
|association_with_transcript=0bp_to_ENST00000306107_5end | |||
|cluster_id=chr3:105085734..105085760,+ | |||
|coexpression_cluster_id=C1916 | |||
|description=CAGE_peak_1_at_ALCAM_5end | |||
|id=chr3:105085734..105085760,+ | |||
|ontology_enrichment_celltype=CL:0000057!4.75e-11!75;CL:0000055!3.84e-09!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.03e-11,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.52e-16!659;UBERON:0000467!3.51e-13!625;UBERON:0000475!4.14e-13!365;UBERON:0000480!6.72e-13!626;UBERON:0000062!1.73e-12!511;UBERON:0002050!3.81e-11!605;UBERON:0005423!3.81e-11!605;UBERON:0000923!4.50e-11!604;UBERON:0005291!4.50e-11!604;UBERON:0006598!4.50e-11!604;UBERON:0002532!4.50e-11!604;UBERON:0000033!8.01e-11!123;UBERON:0000922!2.23e-10!612;UBERON:0000477!1.87e-09!286;UBERON:0000153!2.27e-09!129;UBERON:0007811!2.27e-09!129;UBERON:0004121!1.14e-07!169;UBERON:0000924!2.65e-07!173;UBERON:0006601!2.65e-07!173;UBERON:0002616!3.21e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,1.39e-12,564;UBERON:0005423,3.25e-12,581;UBERON:0000923,4.96e-12,560;UBERON:0010316,4.96e-12,560;UBERON:0005291,4.96e-12,560;UBERON:0006598,4.96e-12,560;UBERON:0010317,4.96e-12,560;UBERON:0002532,4.96e-12,560;UBERON:0000922,2.14e-10,592;UBERON:0010314,2.90e-08,132;UBERON:0004121,7.45e-08,171;UBERON:0000924,7.45e-08,171;UBERON:0006601,7.45e-08,171;UBERON:0000119,3.35e-07,309;UBERON:0003075,4.23e-07,82;UBERON:0007284,4.23e-07,82;UBERON:0003056,4.44e-07,61;UBERON:0002204,5.36e-07,167;UBERON:0000483,6.09e-07,306;UBERON:0001049,6.46e-07,56;UBERON:0005068,6.46e-07,56;UBERON:0006241,6.46e-07,56;UBERON:0007135,6.46e-07,56;UBERON:0004923,9.11e-07,66 | |||
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| |||
|short_description=p1@ALCAM | |||
}} |
Latest revision as of 09:12, 19 September 2015
Short description: | p1@ALCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALCAM_5end |
Coexpression cluster: | C1916_Fibroblast_amniotic_Adipocyte_Smooth_immature_CD14_normal |
Association with transcript: | 0bp_to_ENST00000306107_5end |
EntrezGene: | ALCAM |
HGNC: | 400 |
UniProt: | Q13740 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.03e-11 | 76 |
Ontology term | p-value | n |
---|---|---|
embryonic structure | 1.39e-12 | 564 |
developing anatomical structure | 3.25e-12 | 581 |
germ layer | 4.96e-12 | 560 |
germ layer / neural crest | 4.96e-12 | 560 |
embryonic tissue | 4.96e-12 | 560 |
presumptive structure | 4.96e-12 | 560 |
germ layer / neural crest derived structure | 4.96e-12 | 560 |
epiblast (generic) | 4.96e-12 | 560 |
embryo | 2.14e-10 | 592 |
structure with developmental contribution from neural crest | 2.90e-08 | 132 |
ectoderm-derived structure | 7.45e-08 | 171 |
ectoderm | 7.45e-08 | 171 |
presumptive ectoderm | 7.45e-08 | 171 |
cell layer | 3.35e-07 | 309 |
neural plate | 4.23e-07 | 82 |
presumptive neural plate | 4.23e-07 | 82 |
pre-chordal neural plate | 4.44e-07 | 61 |
musculoskeletal system | 5.36e-07 | 167 |
epithelium | 6.09e-07 | 306 |
neural tube | 6.46e-07 | 56 |
neural rod | 6.46e-07 | 56 |
future spinal cord | 6.46e-07 | 56 |
neural keel | 6.46e-07 | 56 |
organ component layer | 9.11e-07 | 66 |