FFCP PHASE1:Hg19::chr12:56332022..56332030,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:56332022..56332030,+ to FFCP PHASE1:Hg19::chr12:56332022..56332030,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1606 | |EntrezGene=1606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2849 | |HGNC=2849 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000551739_5end | |||
|cluster_id=chr12:56332022..56332030,+ | |||
|coexpression_cluster_id=C1021 | |||
|description=CAGE_peak_17_at_DGKA_5end | |||
|id=chr12:56332022..56332030,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.89e-31!254;CL:0002368!2.30e-24!13;CL:0002076!1.50e-20!43;CL:0002159!1.83e-16!13;CL:0002202!5.44e-15!9;CL:0002632!5.44e-15!9;CL:0000076!2.00e-14!62;CL:0000223!1.75e-13!59;CL:0002166!8.90e-10!3;CL:0002621!9.96e-10!3;CL:0002328!1.28e-09!3;CL:0000068!1.56e-09!3;CL:0000069!1.56e-09!3;CL:0000307!1.56e-09!3;CL:0000377!1.56e-09!3;CL:0000220!2.95e-08!246;CL:0000063!3.11e-08!578;CL:0002321!4.11e-08!248;CL:0002327!4.44e-07!4;CL:0000317!7.68e-07!2;CL:1000448!7.68e-07!2;CL:0002308!7.68e-07!2;CL:0002140!7.68e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002202;1.01e-37;9!CL:0002632;1.01e-37;9!CL:0002368;2.12e-35;13!CL:0002166;9.10e-30;3!CL:0002621;1.22e-29;3!CL:0002328;1.88e-29;3!CL:0000307;4.70e-29;3!CL:0002159;5.30e-24;14!CL:0002327;1.79e-21;4!CL:0000317;1.54e-19;2!CL:1000448;1.54e-19;2!CL:0002308;1.54e-19;2!CL:0002140;1.54e-19;2!CL:0002076;3.04e-16;42!CL:0000362;7.09e-10;9!CL:0002077;1.45e-08;34!CL:0000622;2.24e-08;5!CL:0000154;4.04e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,1.34e-37,9;CL:0002632,1.34e-37,9;CL:0002368,2.61e-35,13;CL:0002166,7.50e-30,3;CL:0002621,1.11e-29,3;CL:0002328,2.64e-29,3;CL:0000068,5.18e-29,3;CL:0000069,5.18e-29,3;CL:0000307,5.18e-29,3;CL:0000377,5.18e-29,3;CL:0002159,4.51e-24,14;CL:0002327,1.93e-21,4;CL:0002076,2.19e-21,42;CL:0000317,9.60e-20,2;CL:1000448,9.60e-20,2;CL:0002308,9.60e-20,2;CL:0002140,9.60e-20,2;CL:0000223,4.33e-15,58;CL:0000066,1.01e-13,253;CL:0000362,6.67e-10,9;CL:0002077,1.11e-09,34;CL:0000622,1.86e-08,5;CL:0000154,3.46e-07,6;CL:0002321,3.79e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;4.70e-29;3!CL:0000223;3.95e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!1.91e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007196!1.36e-11!14;UBERON:0001558!1.36e-11!14;UBERON:0001949!9.96e-10!3;UBERON:0004815!1.28e-09!3;UBERON:0002031!1.28e-09!3;UBERON:0001004!7.56e-08!72;UBERON:0001708!2.13e-07!4;UBERON:0001704!2.13e-07!4;UBERON:0002185!2.78e-07!4;UBERON:0005157!4.39e-07!51;UBERON:0001911!4.44e-07!4;UBERON:0005333!4.44e-07!4;UBERON:0008425!4.44e-07!4;UBERON:0005311!4.44e-07!4;UBERON:0002419!7.68e-07!2;UBERON:0007771!7.68e-07!2;UBERON:0003297!7.68e-07!2;UBERON:0001821!7.68e-07!2;UBERON:0003487!7.68e-07!2;UBERON:0001820!7.68e-07!2;UBERON:0005089!7.68e-07!2;UBERON:0005088!7.68e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.22e-29;3!UBERON:0004815;1.88e-29;3!UBERON:0002031;1.88e-29;3!UBERON:0007196;1.61e-22;15!UBERON:0001558;1.61e-22;15!UBERON:0001708;1.68e-22;4!UBERON:0008895;1.68e-22;4!UBERON:0001911;1.79e-21;4!UBERON:0002419;1.54e-19;2!UBERON:0007771;1.54e-19;2!UBERON:0003297;1.54e-19;2!UBERON:0001821;1.54e-19;2!UBERON:0003487;1.54e-19;2!UBERON:0001820;1.54e-19;2!UBERON:0011159;3.95e-18;5!UBERON:0002185;6.08e-18;5!UBERON:0004807;2.14e-15;22!UBERON:0003929;4.58e-13;7!UBERON:0000486;4.96e-13;12!UBERON:0000485;5.50e-13;7!UBERON:0003126;8.09e-13;7!UBERON:0001005;8.09e-13;7!UBERON:0003350;1.68e-11;8!UBERON:0001828;1.68e-11;8!UBERON:0005911;3.00e-11;36!UBERON:0010371;1.16e-10;31!UBERON:0005178;7.57e-10;34!UBERON:0002224;7.57e-10;34!UBERON:0005181;7.80e-09;35!UBERON:0011137;1.55e-08;11!UBERON:0010323;1.55e-08;11!UBERON:0000072;1.69e-08;37!UBERON:0000065;2.28e-08;44!UBERON:0003729;2.89e-07;13!UBERON:0002365;3.87e-07;31!UBERON:0002330;3.87e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.11e-29,3;UBERON:0004815,2.64e-29,3;UBERON:0002031,2.64e-29,3;UBERON:0001708,1.46e-22,4;UBERON:0008895,1.46e-22,4;UBERON:0007196,1.91e-22,15;UBERON:0001558,1.91e-22,15;UBERON:0001911,1.93e-21,4;UBERON:0005333,1.93e-21,4;UBERON:0008425,1.93e-21,4;UBERON:0005311,1.93e-21,4;UBERON:0002419,9.60e-20,2;UBERON:0007771,9.60e-20,2;UBERON:0003297,9.60e-20,2;UBERON:0001821,9.60e-20,2;UBERON:0003487,9.60e-20,2;UBERON:0001820,9.60e-20,2;UBERON:0005089,9.60e-20,2;UBERON:0005088,9.60e-20,2;UBERON:0011159,3.52e-18,5;UBERON:0002185,7.44e-18,5;UBERON:0010188,2.99e-15,6;UBERON:0002539,2.99e-15,6;UBERON:0008816,2.99e-15,6;UBERON:0003126,8.42e-13,7;UBERON:0001005,8.42e-13,7;UBERON:0004807,5.50e-12,28;UBERON:0003350,1.62e-11,8;UBERON:0001828,1.62e-11,8;UBERON:0001004,1.64e-11,74;UBERON:0000076,5.00e-11,8;UBERON:0000485,3.58e-10,9;UBERON:0005178,1.11e-09,34;UBERON:0002224,1.11e-09,34;UBERON:0005181,2.15e-09,35;UBERON:0005153,9.23e-09,37;UBERON:0008947,1.29e-08,38;UBERON:0003258,1.29e-08,38;UBERON:0010323,1.47e-08,11;UBERON:0000065,5.51e-08,54;UBERON:0002365,2.07e-07,31;UBERON:0005085,2.07e-07,31;UBERON:0002330,2.07e-07,31;UBERON:0003729,2.83e-07,13;UBERON:0000072,7.05e-07,47;UBERON:0011137,8.03e-07,14;UBERON:0005157,8.41e-07,47 | |||
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| ||
|short_description=p17@DGKA | |||
}} | }} |
Latest revision as of 08:52, 19 September 2015
Short description: | p17@DGKA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_DGKA_5end |
Coexpression cluster: | C1021_Small_Bronchial_Tracheal_Mallassezderived_Gingival_Sebocyte_squamous |
Association with transcript: | -12bp_to_ENST00000551739_5end |
EntrezGene: | DGKA |
HGNC: | 2849 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.34e-37 | 9 |
epithelial cell of lower respiratory tract | 1.34e-37 | 9 |
respiratory epithelial cell | 2.61e-35 | 13 |
epithelial cell of Malassez | 7.50e-30 | 3 |
gingival epithelial cell | 1.11e-29 | 3 |
bronchial epithelial cell | 2.64e-29 | 3 |
duct epithelial cell | 5.18e-29 | 3 |
branched duct epithelial cell | 5.18e-29 | 3 |
tracheal epithelial cell | 5.18e-29 | 3 |
tracheoblast | 5.18e-29 | 3 |
general ecto-epithelial cell | 4.51e-24 | 14 |
mammary gland epithelial cell | 1.93e-21 | 4 |
endo-epithelial cell | 2.19e-21 | 42 |
sebum secreting cell | 9.60e-20 | 2 |
epithelial cell of sweat gland | 9.60e-20 | 2 |
epithelial cell of skin gland | 9.60e-20 | 2 |
acinar cell of sebaceous gland | 9.60e-20 | 2 |
endodermal cell | 4.33e-15 | 58 |
epithelial cell | 1.01e-13 | 253 |
epidermal cell | 6.67e-10 | 9 |
ecto-epithelial cell | 1.11e-09 | 34 |
acinar cell | 1.86e-08 | 5 |
protein secreting cell | 3.46e-07 | 6 |
embryonic cell | 3.79e-07 | 250 |