FFCP PHASE1:Hg19::chr4:90756769..90756784,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:90756769..90756784,-
|short_description=p7@SNCA
|description=CAGE_peak_7_at_SNCA_5end
|association_with_transcript=33bp_to_CR457058,CR541653_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6622 | |EntrezGene=6622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11138 | |HGNC=11138 | ||
|TSSclassifier=strong | |||
|UniProt=P37840 | |UniProt=P37840 | ||
|association_with_transcript=33bp_to_CR457058,CR541653_5end | |||
|cluster_id=chr4:90756769..90756784,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_7_at_SNCA_5end | |||
|id=chr4:90756769..90756784,- | |||
|ontology_enrichment_celltype=CL:0002139!2.01e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.64e-10;2!CL:0000558;1.64e-10;2!CL:0002567;2.75e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.49e-10,2;CL:0000765,1.49e-10,2;CL:0000050,1.49e-10,2;CL:0000038,1.49e-10,2;CL:0000558,1.49e-10,2;CL:0000547,1.49e-10,2;CL:0000549,1.49e-10,2;CL:0000550,1.49e-10,2;CL:0000552,1.49e-10,2;CL:0002567,2.59e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.08e-29!115;UBERON:0001049!4.88e-29!57;UBERON:0005068!4.88e-29!57;UBERON:0006241!4.88e-29!57;UBERON:0007135!4.88e-29!57;UBERON:0002020!5.97e-26!34;UBERON:0003528!5.97e-26!34;UBERON:0002780!1.87e-25!41;UBERON:0001890!1.87e-25!41;UBERON:0006240!1.87e-25!41;UBERON:0001893!3.69e-25!34;UBERON:0003080!1.51e-24!42;UBERON:0002791!1.75e-24!33;UBERON:0002616!5.62e-24!59;UBERON:0001869!7.77e-24!32;UBERON:0001017!4.00e-22!82;UBERON:0005743!2.66e-21!86;UBERON:0003075!1.84e-20!86;UBERON:0007284!1.84e-20!86;UBERON:0000955!4.72e-20!69;UBERON:0006238!4.72e-20!69;UBERON:0002346!1.25e-19!90;UBERON:0002619!2.03e-19!22;UBERON:0000073!2.52e-19!94;UBERON:0001016!2.52e-19!94;UBERON:0000956!8.50e-18!25;UBERON:0000203!8.50e-18!25;UBERON:0001950!1.93e-17!20;UBERON:0003056!7.79e-17!61;UBERON:0000153!1.37e-15!129;UBERON:0007811!1.37e-15!129;UBERON:0000033!1.58e-15!123;UBERON:0004111!4.40e-14!241;UBERON:0004121!1.61e-13!169;UBERON:0000924!2.97e-13!173;UBERON:0006601!2.97e-13!173;UBERON:0000477!6.55e-12!286;UBERON:0000025!7.16e-11!194;UBERON:0002420!3.79e-10!9;UBERON:0007245!3.79e-10!9;UBERON:0010009!3.79e-10!9;UBERON:0010011!3.79e-10!9;UBERON:0000454!3.79e-10!9;UBERON:0002308!9.32e-10!9;UBERON:0000125!9.32e-10!9;UBERON:0009663!4.96e-08!7;UBERON:0001871!1.10e-07!7;UBERON:0000200!2.02e-07!6;UBERON:0000178!3.47e-07!15;UBERON:0000179!3.47e-07!15;UBERON:0000463!3.47e-07!15;UBERON:0000468!4.93e-07!659;UBERON:0000483!7.30e-07!309;UBERON:0000922!7.58e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.93e-28;22!UBERON:0000178;4.75e-27;15!UBERON:0000179;4.75e-27;15!UBERON:0000463;4.75e-27;15!UBERON:0002791;6.81e-27;32!UBERON:0001950;3.28e-26;20!UBERON:0003528;3.85e-25;34!UBERON:0002020;3.85e-25;34!UBERON:0000956;1.03e-24;25!UBERON:0000203;1.03e-24;25!UBERON:0001869;5.95e-23;32!UBERON:0001893;7.69e-22;34!UBERON:0002780;7.86e-17;41!UBERON:0001890;7.86e-17;41!UBERON:0000200;1.46e-13;6!UBERON:0000073;5.76e-13;53!UBERON:0002616;5.76e-13;53!UBERON:0001871;1.79e-11;6!UBERON:0002702;4.08e-11;2!UBERON:0002771;6.73e-11;2!UBERON:0002390;7.31e-11;32!UBERON:0001017;2.10e-09;75!UBERON:0002021;2.17e-09;5!UBERON:0002420;8.83e-09;9!UBERON:0007245;8.83e-09;9!UBERON:0010009;8.83e-09;9!UBERON:0010011;8.83e-09;9!UBERON:0000454;8.83e-09;9!UBERON:0000125;1.18e-08;9!UBERON:0002308;1.18e-08;9!UBERON:0000955;4.41e-08;68!UBERON:0001870;1.10e-07;3!UBERON:0005383;2.75e-07;3!UBERON:0005382;2.75e-07;3!UBERON:0007023;4.26e-07;114!UBERON:0001016;8.34e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.11e-32,34;UBERON:0002020,5.11e-32,34;UBERON:0002791,5.97e-30,32;UBERON:0002619,2.91e-28,22;UBERON:0001893,4.75e-28,34;UBERON:0000178,4.78e-27,15;UBERON:0000179,4.78e-27,15;UBERON:0000463,4.78e-27,15;UBERON:0001950,3.30e-26,20;UBERON:0001869,5.00e-26,32;UBERON:0000956,1.02e-24,25;UBERON:0000203,1.02e-24,25;UBERON:0007023,6.29e-24,114;UBERON:0002780,8.01e-23,41;UBERON:0001890,8.01e-23,41;UBERON:0003080,8.01e-23,41;UBERON:0006240,8.01e-23,41;UBERON:0001049,7.97e-21,56;UBERON:0005068,7.97e-21,56;UBERON:0006241,7.97e-21,56;UBERON:0007135,7.97e-21,56;UBERON:0000073,1.70e-19,53;UBERON:0002616,1.70e-19,53;UBERON:0001017,7.29e-17,81;UBERON:0000955,3.07e-16,68;UBERON:0006238,3.07e-16,68;UBERON:0001016,8.47e-15,89;UBERON:0003056,2.10e-14,61;UBERON:0000200,1.72e-13,6;UBERON:0003075,4.02e-13,82;UBERON:0007284,4.02e-13,82;UBERON:0002346,2.39e-12,86;UBERON:0001871,1.57e-11,6;UBERON:0002702,3.89e-11,2;UBERON:0002771,9.09e-11,2;UBERON:0010371,1.32e-09,104;UBERON:0002021,1.99e-09,5;UBERON:0002420,7.33e-09,9;UBERON:0007245,7.33e-09,9;UBERON:0010009,7.33e-09,9;UBERON:0010011,7.33e-09,9;UBERON:0000454,7.33e-09,9;UBERON:0000125,1.07e-08,9;UBERON:0002308,1.07e-08,9;UBERON:0010314,6.94e-08,132;UBERON:0001870,1.07e-07,3;UBERON:0005383,2.06e-07,3;UBERON:0005382,2.06e-07,3;UBERON:0011216,5.32e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0.56530794192401,0.838998872419812,0,0.626984899610432,0.258416759169329,0,0.33472061276467,0,0.760272105718513,0.24406205754817,0,2.43042584364528,0.357198913136319,0.44905874525234,0.450445921933289,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.538842688278752,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.185176890317059,0,0,0,0,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0.891786973732369,0,0.335964256397719,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0.253991577168676,0,1.17217447210047,1.71072446022705,0.719792448923265,1.50171528921959,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.0920809889358963,0.229628896329213,0,0.655622074797121,0,0,0,0,0.105551628892876,0,0.170093705276516,0.647747748306418,0,0,0,0,0,0,1.97333888981341,1.0457418040996,0,0,0.325378394664303,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0,1.55545975149084,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,30.4468565539302,23.7037534214136,66.0790737122029,7.86164859010704,6.17043409629291,14.2664128462398,24.8414461129533,96.761271507901,1.06824071127473,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0.811367035427949,0.33307196799782,0,0,0,0,0,0.568272293612826,0,0,0,0.994147647766298,2.95405774462077,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,31.1328020051022,0,0,1.48428957058962,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0.885741385813839,1.32656082487949,0,0.663475559587348,0.591095237907095,3.07139556015562,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,1.83643656978294,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0,0.451961481561065,0,0,0.379864775735272,0,0,0.426905989478705,0.19980960958213,0,1.03082936549324,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0.558564802544508,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0.295282444544246,0,0.795229689809303,1.36203406111576,0,0.275078873194468,0,0.2249738915515,0,0.425246896606173,0,0,0,0,0.537862017998534,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.387848869084652,1.3223260174269,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,2.65820453990096,3.05065662254908,2.3786276834235,0.573409195690071,0.776503360757966,0,0,0.124980407962107,0.454947352624943,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0.463044948647668,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,1.10606748921385,0,0.132864840313363,0.163565394255844,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,1.11743701340006,4.51256001329661,1.76450187355203,0.345786262321089,5.32869630585109,0,0.0981477185010256,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0.337687923091973,0.781078098613847,2.06686796501184,0.507326481551255,1.09394961803644,0,0,0.175871244359621,0.127762427639595,0,0,0.606965604236632,0,0.177404740325278,0,0,0.543757863814654,0.526182188502793,0,0,0,1.88538707899202,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0.430227358820278,0.118332000730565,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0.785233868459781,0.594092800654172,1.6906229103336,0,0,0.128915775947154,0,0,0,0,0,0.917458566809082,1.29005624836306,0,0.815897882290976,1.74540276136151,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0.829169439458779,0.7240309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| ||
|short_description=p7@SNCA | |||
}} | }} |
Latest revision as of 08:47, 19 September 2015
Short description: | p7@SNCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SNCA_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 33bp_to_CR457058, CR541653_5end |
EntrezGene: | SNCA |
HGNC: | 11138 |
UniProt: | P37840 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.49e-10 | 2 |
erythroblast | 1.49e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 1.49e-10 | 2 |
erythroid progenitor cell | 1.49e-10 | 2 |
reticulocyte | 1.49e-10 | 2 |
proerythroblast | 1.49e-10 | 2 |
basophilic erythroblast | 1.49e-10 | 2 |
polychromatophilic erythroblast | 1.49e-10 | 2 |
orthochromatic erythroblast | 1.49e-10 | 2 |
light melanocyte | 2.59e-07 | 3 |