FFCP PHASE1:Hg19::chr4:90229305..90229320,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285513 | |EntrezGene=285513 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27733 | |HGNC=27733 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZVF9 | |UniProt=Q6ZVF9 | ||
|association_with_transcript=-144bp_to_ENST00000333209,NM_198281,uc003hsm.1_5end | |association_with_transcript=-144bp_to_ENST00000333209,NM_198281,uc003hsm.1_5end | ||
|cluster_id=chr4:90229305..90229320,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_7_at_GPRIN3_5end | |description=CAGE_peak_7_at_GPRIN3_5end | ||
|id=chr4:90229305..90229320,- | |id=chr4:90229305..90229320,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000243;2.64e-10;15!CL:0000125;2.64e-10;15!CL:0000095;2.51e-09;17!CL:0002319;7.56e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,2.58e-10,15;CL:0000125,2.58e-10,15;CL:0000030,2.58e-10,15;CL:0000339,2.58e-10,15;CL:0000095,2.46e-09,17;CL:0000123,2.46e-09,17;CL:0002319,7.45e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.42e-15;10!UBERON:0003056;2.09e-14;3!CL:0000339;2.64e-10;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;3.71e-14;11!DOID:5409;3.26e-11;4!DOID:1325;5.86e-07;7!DOID:3904;5.86e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,3.59e-14,11;DOID:5409,3.42e-11,4;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0000966;3.49e-09;5!UBERON:0005388;3.49e-09;5!UBERON:0001802;3.49e-09;5!UBERON:0000955;3.46e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0000955,9.66e-10,68;UBERON:0006238,9.66e-10,68;UBERON:0001017,2.59e-08,81;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6;UBERON:0001016,1.48e-07,89 | |||
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|short_description=p7@GPRIN3 | |short_description=p7@GPRIN3 | ||
}} | }} |
Latest revision as of 08:34, 19 September 2015
Short description: | p7@GPRIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GPRIN3_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -144bp_to_ENST00000333209, NM_198281, uc003hsm.1_5end |
EntrezGene: | GPRIN3 |
HGNC: | 27733 |
UniProt: | Q6ZVF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 2.58e-10 | 15 |
glial cell | 2.58e-10 | 15 |
glioblast | 2.58e-10 | 15 |
glioblast (sensu Vertebrata) | 2.58e-10 | 15 |
neuron associated cell | 2.46e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.46e-09 | 17 |
neural cell | 7.45e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
brain | 9.66e-10 | 68 |
future brain | 9.66e-10 | 68 |
central nervous system | 2.59e-08 | 81 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |
nervous system | 1.48e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.59e-14 | 11 |
lung small cell carcinoma | 3.42e-11 | 4 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |