FFCP PHASE1:Hg19::chr1:78511901..78511912,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54810 | |EntrezGene=54810 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18177 | |HGNC=18177 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=122bp_to_AB528004,CU690284,HQ447840_5end | |association_with_transcript=122bp_to_AB528004,CU690284,HQ447840_5end | ||
|cluster_id=chr1:78511901..78511912,+ | |||
|description=CAGE_peak_6_at_GIPC2_5end | |description=CAGE_peak_6_at_GIPC2_5end | ||
|id=chr1:78511901..78511912,+ | |id=chr1:78511901..78511912,+ | ||
|ontology_enrichment_celltype=CL:0002139!4.63e-08!24;CL:0000071!9.57e-08!18;CL:0002546!9.57e-08!18;CL:0002618!2.85e-07!3 | |ontology_enrichment_celltype=CL:0002139!4.63e-08!24;CL:0000071!9.57e-08!18;CL:0002546!9.57e-08!18;CL:0002618!2.85e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002618;1.97e-84;3!CL:0002543;9.26e-43;6!CL:0000071;1.63e-25;18!CL:0002139;2.68e-19;24!CL:0000047;1.91e-15;2!CL:0000115;9.44e-10;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,9.61e-85,3;CL:0002543,6.48e-43,6;CL:0000071,1.63e-25,18;CL:0002546,1.63e-25,18;CL:0002139,2.68e-19,24;CL:0000115,4.68e-13,36;CL:0002078,1.52e-10,45;CL:0000213,2.77e-08,58;CL:0000215,2.77e-08,58;CL:0000076,1.17e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.63e-25;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.76e-20!115;UBERON:0002066!1.52e-09!5;UBERON:0004111!1.45e-08!241;UBERON:0000477!2.59e-08!286;UBERON:0000025!5.84e-08!194;UBERON:0001986!9.57e-08!18;UBERON:0004638!9.57e-08!18;UBERON:0004852!9.57e-08!18;UBERON:0001638!6.21e-07!9;UBERON:0003920!6.21e-07!9;UBERON:0004582!6.21e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!6.76e-20!115;UBERON:0002066!1.52e-09!5;UBERON:0004111!1.45e-08!241;UBERON:0000477!2.59e-08!286;UBERON:0000025!5.84e-08!194;UBERON:0001986!9.57e-08!18;UBERON:0004638!9.57e-08!18;UBERON:0004852!9.57e-08!18;UBERON:0001638!6.21e-07!9;UBERON:0003920!6.21e-07!9;UBERON:0004582!6.21e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002066;4.19e-51;5!UBERON:0001638;7.86e-29;9!UBERON:0010260;7.86e-29;9!UBERON:0003920;7.86e-29;9!UBERON:0004582;7.86e-29;9!UBERON:0004638;1.63e-25;18!UBERON:0001986;1.63e-25;18!UBERON:0004852;1.63e-25;18!UBERON:0000487;5.39e-21;22!UBERON:0006914;1.50e-18;25!UBERON:0000490;2.74e-11;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002066,2.73e-51,5;UBERON:0001638,6.20e-29,9;UBERON:0010260,6.20e-29,9;UBERON:0003920,6.20e-29,9;UBERON:0004582,6.20e-29,9;UBERON:0004638,1.63e-25,18;UBERON:0001986,1.63e-25,18;UBERON:0004852,1.63e-25,18;UBERON:0000487,5.39e-21,22;UBERON:0006914,1.50e-18,25;UBERON:0007500,3.77e-08,59;UBERON:0001981,3.77e-08,59;UBERON:0004537,3.77e-08,59;UBERON:0006965,3.77e-08,59;UBERON:0000055,4.00e-07,68 | |||
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| ||
|short_description=p6@GIPC2 | |short_description=p6@GIPC2 | ||
}} | }} |
Latest revision as of 08:26, 19 September 2015
Short description: | p6@GIPC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GIPC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 122bp_to_AB528004, CU690284, HQ447840_5end |
EntrezGene: | GIPC2 |
HGNC: | 18177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 9.61e-85 | 3 |
vein endothelial cell | 6.48e-43 | 6 |
blood vessel endothelial cell | 1.63e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.63e-25 | 18 |
endothelial cell of vascular tree | 2.68e-19 | 24 |
endothelial cell | 4.68e-13 | 36 |
meso-epithelial cell | 1.52e-10 | 45 |
lining cell | 2.77e-08 | 58 |
barrier cell | 2.77e-08 | 58 |
squamous epithelial cell | 1.17e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
umbilical vein | 2.73e-51 | 5 |
vein | 6.20e-29 | 9 |
umbilical blood vessel | 6.20e-29 | 9 |
venous blood vessel | 6.20e-29 | 9 |
venous system | 6.20e-29 | 9 |
blood vessel endothelium | 1.63e-25 | 18 |
endothelium | 1.63e-25 | 18 |
cardiovascular system endothelium | 1.63e-25 | 18 |
simple squamous epithelium | 5.39e-21 | 22 |
squamous epithelium | 1.50e-18 | 25 |
epithelial tube open at both ends | 3.77e-08 | 59 |
blood vessel | 3.77e-08 | 59 |
blood vasculature | 3.77e-08 | 59 |
vascular cord | 3.77e-08 | 59 |
vessel | 4.00e-07 | 68 |