FFCP PHASE1:Hg19::chr3:10206567..10206582,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3656 | |EntrezGene=3656 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6113 | |HGNC=6113 | ||
|TSSclassifier=strong | |||
|UniProt=O43187 | |UniProt=O43187 | ||
|association_with_transcript=4bp_to_NM_001570,uc003bve.1_5end | |association_with_transcript=4bp_to_NM_001570,uc003bve.1_5end | ||
|cluster_id=chr3:10206567..10206582,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_IRAK2_5end | |description=CAGE_peak_2_at_IRAK2_5end | ||
|id=chr3:10206567..10206582,+ | |id=chr3:10206567..10206582,+ | ||
|ontology_enrichment_celltype=CL:0000766!8.04e-17!76;CL:0002057!1.90e-16!42;CL:0000860!3.11e-15!45;CL:0000557!1.65e-14!71;CL:0002009!1.07e-12!65;CL:0000839!1.57e-12!70;CL:0002194!6.11e-12!63;CL:0000576!6.11e-12!63;CL:0000040!6.11e-12!63;CL:0000559!6.11e-12!63;CL:0000738!1.02e-08!140;CL:0000763!3.17e-08!112;CL:0000049!3.17e-08!112 | |ontology_enrichment_celltype=CL:0000766!8.04e-17!76;CL:0002057!1.90e-16!42;CL:0000860!3.11e-15!45;CL:0000557!1.65e-14!71;CL:0002009!1.07e-12!65;CL:0000839!1.57e-12!70;CL:0002194!6.11e-12!63;CL:0000576!6.11e-12!63;CL:0000040!6.11e-12!63;CL:0000559!6.11e-12!63;CL:0000738!1.02e-08!140;CL:0000763!3.17e-08!112;CL:0000049!3.17e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.85e-19;33!CL:0002057;5.85e-19;33!CL:0000473;1.90e-16;39!CL:0000234;1.90e-16;39!CL:0000576;1.25e-11;48!CL:0000766;2.52e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.27e-21,72;CL:0000473,1.28e-19,48;CL:0000234,1.28e-19,48;CL:0000860,6.53e-19,42;CL:0002057,6.53e-19,42;CL:0000557,7.09e-19,67;CL:0002009,1.12e-16,61;CL:0000839,4.11e-16,66;CL:0002194,8.99e-16,59;CL:0000576,8.99e-16,59;CL:0000040,8.99e-16,59;CL:0000559,8.99e-16,59;CL:0000738,2.16e-12,136;CL:0000763,1.69e-11,108;CL:0000049,1.69e-11,108;CL:0002031,1.68e-08,120;CL:0002087,1.20e-07,115;CL:0000115,5.88e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!7.47e-16!115;UBERON:0002193!8.84e-15!112;UBERON:0002371!6.30e-13!80;UBERON:0002390!6.15e-12!102;UBERON:0003061!6.15e-12!102;UBERON:0000480!1.17e-11!626;UBERON:0000467!1.18e-11!625;UBERON:0003081!2.48e-11!216;UBERON:0001474!2.66e-11!86;UBERON:0004765!3.18e-10!101;UBERON:0001434!3.18e-10!101;UBERON:0000923!4.21e-09!604;UBERON:0005291!4.21e-09!604;UBERON:0006598!4.21e-09!604;UBERON:0002532!4.21e-09!604;UBERON:0002050!7.63e-09!605;UBERON:0005423!7.63e-09!605;UBERON:0004111!3.49e-08!241;UBERON:0002204!5.57e-08!167;UBERON:0000922!6.07e-08!612;UBERON:0000468!3.06e-07!659;UBERON:0000025!6.34e-07!194;UBERON:0000477!7.86e-07!286 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.99e-19,93;UBERON:0002193,6.40e-19,108;UBERON:0002371,9.36e-17,76;UBERON:0002390,1.52e-15,98;UBERON:0003061,1.52e-15,98;UBERON:0001474,3.22e-14,82;UBERON:0004765,4.25e-13,90;UBERON:0003081,5.47e-12,203;UBERON:0001434,2.93e-11,100;UBERON:0005423,7.06e-08,581;UBERON:0000922,1.11e-07,592;UBERON:0002204,1.21e-07,167;UBERON:0004111,2.39e-07,240;UBERON:0000025,6.67e-07,192;UBERON:0003914,9.39e-07,117 | |||
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| ||
|short_description=p2@IRAK2 | |short_description=p2@IRAK2 | ||
}} | }} |
Latest revision as of 08:21, 19 September 2015
Short description: | p2@IRAK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IRAK2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 4bp_to_NM_001570, uc003bve.1_5end |
EntrezGene: | IRAK2 |
HGNC: | 6113 |
UniProt: | O43187 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.27e-21 | 72 |
defensive cell | 1.28e-19 | 48 |
phagocyte | 1.28e-19 | 48 |
classical monocyte | 6.53e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.53e-19 | 42 |
granulocyte monocyte progenitor cell | 7.09e-19 | 67 |
macrophage dendritic cell progenitor | 1.12e-16 | 61 |
myeloid lineage restricted progenitor cell | 4.11e-16 | 66 |
monopoietic cell | 8.99e-16 | 59 |
monocyte | 8.99e-16 | 59 |
monoblast | 8.99e-16 | 59 |
promonocyte | 8.99e-16 | 59 |
leukocyte | 2.16e-12 | 136 |
myeloid cell | 1.69e-11 | 108 |
common myeloid progenitor | 1.69e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 1.68e-08 | 120 |
nongranular leukocyte | 1.20e-07 | 115 |
endothelial cell | 5.88e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.99e-19 | 93 |
hemolymphoid system | 6.40e-19 | 108 |
bone marrow | 9.36e-17 | 76 |
hematopoietic system | 1.52e-15 | 98 |
blood island | 1.52e-15 | 98 |
bone element | 3.22e-14 | 82 |
skeletal element | 4.25e-13 | 90 |
lateral plate mesoderm | 5.47e-12 | 203 |
skeletal system | 2.93e-11 | 100 |
developing anatomical structure | 7.06e-08 | 581 |
embryo | 1.11e-07 | 592 |
musculoskeletal system | 1.21e-07 | 167 |
anatomical conduit | 2.39e-07 | 240 |
tube | 6.67e-07 | 192 |
epithelial tube | 9.39e-07 | 117 |