FFCP PHASE1:Hg19::chr4:89857575..89857583,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10144 | |EntrezGene=10144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19367 | |HGNC=19367 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000511145_5end | |association_with_transcript=-2bp_to_ENST00000511145_5end | ||
|cluster_id=chr4:89857575..89857583,- | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_9_at_FAM13A_5end | |description=CAGE_peak_9_at_FAM13A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002535!2.73e-11!2;CL:0002541!6.34e-08!3;CL:0000817!7.26e-08!3 | |ontology_enrichment_celltype=CL:0002535!2.73e-11!2;CL:0002541!6.34e-08!3;CL:0000817!7.26e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002535;6.96e-21;2 | |ontology_enrichment_celltype_v019=CL:0002535;6.96e-21;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,6.96e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.62e-41;1!UBERON:0004872;5.08e-07;7 | |ontology_enrichment_development_v019=UBERON:0003124;6.62e-41;1!UBERON:0004872;5.08e-07;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;3.49e-09;5 | |ontology_enrichment_disease_v019=DOID:4362;3.49e-09;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,3.49e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003124!2.00e-12!7;UBERON:0006955!2.73e-11!2;UBERON:0004801!2.73e-11!2;UBERON:0000476!6.34e-08!3;UBERON:0000920!6.34e-08!3;UBERON:0000988!8.29e-08!3 | |ontology_enrichment_uberon=UBERON:0003124!2.00e-12!7;UBERON:0006955!2.73e-11!2;UBERON:0004801!2.73e-11!2;UBERON:0000476!6.34e-08!3;UBERON:0000920!6.34e-08!3;UBERON:0000988!8.29e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;6.96e-21;2!UBERON:0004801;6.96e-21;2!UBERON:0001987;2.53e-11;4!UBERON:0001052;3.42e-11;4!UBERON:0004907;3.22e-09;5!UBERON:0000002;7.25e-08;6!UBERON:0001560;7.25e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0006955;6.96e-21;2!UBERON:0004801;6.96e-21;2!UBERON:0001987;2.53e-11;4!UBERON:0001052;3.42e-11;4!UBERON:0004907;3.22e-09;5!UBERON:0000002;7.25e-08;6!UBERON:0001560;7.25e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,6.96e-21,2;UBERON:0004801,6.96e-21,2;UBERON:0001987,2.53e-11,4;UBERON:0004340,2.53e-11,4;UBERON:0001052,3.42e-11,4;UBERON:0004907,3.22e-09,5;UBERON:0000995,1.42e-08,21;UBERON:0005795,3.15e-08,22;UBERON:0003975,3.15e-08,22;UBERON:0000002,7.25e-08,6;UBERON:0001560,7.25e-08,6;UBERON:0004175,2.35e-07,25;UBERON:0003124,5.08e-07,7 | |||
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|short_description=p9@FAM13A | |short_description=p9@FAM13A | ||
}} | }} |
Latest revision as of 08:19, 19 September 2015
Short description: | p9@FAM13A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FAM13A_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -2bp_to_ENST00000511145_5end |
EntrezGene: | FAM13A |
HGNC: | 19367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 6.96e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 6.96e-21 | 2 |
cervix epithelium | 6.96e-21 | 2 |
placenta | 2.53e-11 | 4 |
allantois | 2.53e-11 | 4 |
rectum | 3.42e-11 | 4 |
lower digestive tract | 3.22e-09 | 5 |
uterus | 1.42e-08 | 21 |
embryonic uterus | 3.15e-08 | 22 |
internal female genitalia | 3.15e-08 | 22 |
uterine cervix | 7.25e-08 | 6 |
neck of organ | 7.25e-08 | 6 |
internal genitalia | 2.35e-07 | 25 |
chorion | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.49e-09 | 5 |