FFCP PHASE1:Hg19::chr19:50063996..50064043,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51070 | |EntrezGene=51070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17946 | |HGNC=17946 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y314 | |UniProt=Q9Y314 | ||
|association_with_transcript=-47bp_to_BC011249_5end | |association_with_transcript=-47bp_to_BC011249_5end | ||
|cluster_id=chr19:50063996..50064043,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_NOSIP_5end | |description=CAGE_peak_2_at_NOSIP_5end | ||
|id=chr19:50063996..50064043,- | |id=chr19:50063996..50064043,- | ||
|ontology_enrichment_celltype=CL:0000791!3.28e-22!18;CL:0000789!3.28e-22!18;CL:0002420!3.28e-22!18;CL:0002419!3.28e-22!18;CL:0000790!3.28e-22!18;CL:0000738!2.94e-18!140;CL:0000084!3.90e-18!25;CL:0000827!3.90e-18!25;CL:0000625!3.54e-16!11;CL:0002087!2.15e-15!119;CL:0002031!2.42e-14!124;CL:0000838!5.63e-13!52;CL:0000542!1.46e-12!53;CL:0000051!1.46e-12!53;CL:0000037!3.91e-12!172;CL:0000566!3.91e-12!172;CL:0002032!1.38e-10!165;CL:0000837!1.38e-10!165;CL:0000988!1.54e-10!182;CL:0000624!2.41e-09!6 | |ontology_enrichment_celltype=CL:0000791!3.28e-22!18;CL:0000789!3.28e-22!18;CL:0002420!3.28e-22!18;CL:0002419!3.28e-22!18;CL:0000790!3.28e-22!18;CL:0000738!2.94e-18!140;CL:0000084!3.90e-18!25;CL:0000827!3.90e-18!25;CL:0000625!3.54e-16!11;CL:0002087!2.15e-15!119;CL:0002031!2.42e-14!124;CL:0000838!5.63e-13!52;CL:0000542!1.46e-12!53;CL:0000051!1.46e-12!53;CL:0000037!3.91e-12!172;CL:0000566!3.91e-12!172;CL:0002032!1.38e-10!165;CL:0000837!1.38e-10!165;CL:0000988!1.54e-10!182;CL:0000624!2.41e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.42e-40;18!CL:0000789;5.42e-40;18!CL:0002419;5.42e-40;18!CL:0000084;3.64e-34;25!CL:0000625;2.14e-28;11!CL:0000624;7.79e-16;6!CL:0000542;3.49e-10;53!CL:0000898;1.45e-08;3!CL:0000226;1.79e-08;3!CL:0000842;1.79e-08;3!CL:0000623;4.13e-08;3!CL:0000767;3.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.56e-40,18;CL:0000789,5.56e-40,18;CL:0002420,5.56e-40,18;CL:0002419,5.56e-40,18;CL:0000790,5.56e-40,18;CL:0000084,3.64e-34,25;CL:0000827,3.64e-34,25;CL:0000625,2.17e-28,11;CL:0000838,1.64e-20,52;CL:0000542,5.35e-20,53;CL:0000051,5.35e-20,53;CL:0000624,7.89e-16,6;CL:0000738,7.30e-14,136;CL:0002087,1.14e-12,115;CL:0000037,1.62e-09,168;CL:0002031,5.74e-09,120;CL:0000988,1.34e-08,177;CL:0000898,1.47e-08,3;CL:0000226,1.79e-08,3;CL:0000842,1.79e-08,3;CL:0000623,4.08e-08,3;CL:0000825,4.08e-08,3;CL:0002032,5.78e-08,161;CL:0000837,5.78e-08,161;CL:0000767,3.37e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.42e-40;18!CL:0000051;3.49e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.21e-17!115;UBERON:0000178!2.18e-12!15;UBERON:0000179!2.18e-12!15;UBERON:0000463!2.18e-12!15;UBERON:0002390!8.06e-11!102;UBERON:0003061!8.06e-11!102;UBERON:0002193!2.79e-10!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.59e-22;15!UBERON:0000179;1.59e-22;15!UBERON:0000463;1.59e-22;15!UBERON:0002390;9.18e-15;32!UBERON:0002193;2.46e-10;42!UBERON:0004177;2.32e-07;5!UBERON:0005057;2.32e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.55e-22,15;UBERON:0000179,1.55e-22,15;UBERON:0000463,1.55e-22,15;UBERON:0004177,2.92e-08,7;UBERON:0005057,2.92e-08,7 | |||
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| ||
|short_description=p2@NOSIP | |short_description=p2@NOSIP | ||
}} | }} |
Latest revision as of 08:10, 19 September 2015
Short description: | p2@NOSIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NOSIP_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -47bp_to_BC011249_5end |
EntrezGene: | NOSIP |
HGNC: | 17946 |
UniProt: | Q9Y314 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.56e-40 | 18 |
alpha-beta T cell | 5.56e-40 | 18 |
immature T cell | 5.56e-40 | 18 |
mature T cell | 5.56e-40 | 18 |
immature alpha-beta T cell | 5.56e-40 | 18 |
T cell | 3.64e-34 | 25 |
pro-T cell | 3.64e-34 | 25 |
CD8-positive, alpha-beta T cell | 2.17e-28 | 11 |
lymphoid lineage restricted progenitor cell | 1.64e-20 | 52 |
lymphocyte | 5.35e-20 | 53 |
common lymphoid progenitor | 5.35e-20 | 53 |
CD4-positive, alpha-beta T cell | 7.89e-16 | 6 |
leukocyte | 7.30e-14 | 136 |
nongranular leukocyte | 1.14e-12 | 115 |
hematopoietic stem cell | 1.62e-09 | 168 |
hematopoietic lineage restricted progenitor cell | 5.74e-09 | 120 |
hematopoietic cell | 1.34e-08 | 177 |
naive T cell | 1.47e-08 | 3 |
single nucleate cell | 1.79e-08 | 3 |
mononuclear cell | 1.79e-08 | 3 |
natural killer cell | 4.08e-08 | 3 |
pro-NK cell | 4.08e-08 | 3 |
hematopoietic oligopotent progenitor cell | 5.78e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.78e-08 | 161 |
basophil | 3.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.55e-22 | 15 |
haemolymphatic fluid | 1.55e-22 | 15 |
organism substance | 1.55e-22 | 15 |
hemopoietic organ | 2.92e-08 | 7 |
immune organ | 2.92e-08 | 7 |