FFCP PHASE1:Hg19::chr17:27370142..27370164,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51268 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17804 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P0Z9 | |||
|association_with_transcript=224bp_to_ENST00000323372,NM_016518,uc002hdr.1_5end | |||
|cluster_id=chr17:27370142..27370164,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_PIPOX_5end | |||
|id=chr17:27370142..27370164,+ | |||
|ontology_enrichment_celltype=CL:0000128!1.69e-12!7;CL:0000126!1.69e-12!7;CL:0000127!1.69e-12!7;CL:0002453!1.69e-12!7;CL:0002319!1.06e-08!25;CL:0000181!5.80e-08!12;CL:0000417!5.80e-08!12;CL:0000668!5.80e-08!12;CL:0000414!5.80e-08!12;CL:0000412!5.80e-08!12;CL:0000182!5.80e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000128;9.16e-24;7!CL:0000126;9.16e-24;7!CL:0000127;9.16e-24;7!CL:0002605;2.93e-11;3!CL:0002603;4.53e-11;3!CL:0000182;7.41e-10;12!CL:0000243;4.19e-09;15!CL:0000125;4.19e-09;15!CL:0002319;1.40e-08;25!CL:0000095;5.01e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.09e-23,7;CL:0000126,1.09e-23,7;CL:0000127,1.09e-23,7;CL:0002453,1.09e-23,7;CL:0002605,3.04e-11,3;CL:0002603,4.86e-11,3;CL:0000182,7.09e-10,12;CL:0000243,4.47e-09,15;CL:0000125,4.47e-09,15;CL:0000030,4.47e-09,15;CL:0000339,4.47e-09,15;CL:0002319,1.41e-08,25;CL:0000095,5.31e-08,17;CL:0000123,5.31e-08,17 | |||
|ontology_enrichment_development_v019=CL:0000339;4.19e-09;15!UBERON:0004161;9.75e-08;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.24e-53!82;UBERON:0001049!4.96e-52!57;UBERON:0005068!4.96e-52!57;UBERON:0006241!4.96e-52!57;UBERON:0007135!4.96e-52!57;UBERON:0005743!1.95e-51!86;UBERON:0000073!2.00e-46!94;UBERON:0001016!2.00e-46!94;UBERON:0002616!5.06e-45!59;UBERON:0000955!1.05e-43!69;UBERON:0006238!1.05e-43!69;UBERON:0003075!6.60e-39!86;UBERON:0007284!6.60e-39!86;UBERON:0002346!2.15e-36!90;UBERON:0001893!3.54e-35!34;UBERON:0002020!3.83e-35!34;UBERON:0003528!3.83e-35!34;UBERON:0002780!3.81e-34!41;UBERON:0001890!3.81e-34!41;UBERON:0006240!3.81e-34!41;UBERON:0002791!4.97e-34!33;UBERON:0003080!4.45e-33!42;UBERON:0001869!6.94e-33!32;UBERON:0000033!1.97e-27!123;UBERON:0003056!3.25e-27!61;UBERON:0000153!2.67e-26!129;UBERON:0007811!2.67e-26!129;UBERON:0000956!3.25e-24!25;UBERON:0000203!3.25e-24!25;UBERON:0004121!4.65e-23!169;UBERON:0007023!4.06e-22!115;UBERON:0000924!4.53e-22!173;UBERON:0006601!4.53e-22!173;UBERON:0003076!2.81e-20!15;UBERON:0003057!2.81e-20!15;UBERON:0002619!8.36e-20!22;UBERON:0001950!3.54e-17!20;UBERON:0004733!7.46e-17!12;UBERON:0002028!7.46e-17!12;UBERON:0007277!7.46e-17!12;UBERON:0004732!2.73e-15!13;UBERON:0000025!4.06e-15!194;UBERON:0002680!1.56e-13!9;UBERON:0001895!1.56e-13!9;UBERON:0010092!1.56e-13!9;UBERON:0002308!1.86e-12!9;UBERON:0000125!1.86e-12!9;UBERON:0004111!7.00e-11!241;UBERON:0000477!3.90e-10!286;UBERON:0009663!4.05e-10!7;UBERON:0002037!4.85e-10!6;UBERON:0006215!4.85e-10!6;UBERON:0002420!8.96e-10!9;UBERON:0007245!8.96e-10!9;UBERON:0010009!8.96e-10!9;UBERON:0010011!8.96e-10!9;UBERON:0000454!8.96e-10!9;UBERON:0000200!1.54e-08!6;UBERON:0000483!3.87e-08!309;UBERON:0002298!4.03e-08!8;UBERON:0000119!6.85e-08!312;UBERON:0000062!8.15e-08!511;UBERON:0000922!1.11e-07!612;UBERON:0000475!2.79e-07!365;UBERON:0002107!3.41e-07!19;UBERON:0006925!3.41e-07!19;UBERON:0008836!3.41e-07!19;UBERON:0000467!6.05e-07!625;UBERON:0000480!6.93e-07!626;UBERON:0000369!7.37e-07!4;UBERON:0002435!7.37e-07!4;UBERON:0000204!7.37e-07!4;UBERON:0010082!7.37e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;6.19e-29;32!UBERON:0001869;3.55e-28;32!UBERON:0001893;9.19e-28;34!UBERON:0003528;1.24e-27;34!UBERON:0002020;1.24e-27;34!UBERON:0002780;9.66e-24;41!UBERON:0001890;9.66e-24;41!UBERON:0000956;1.28e-23;25!UBERON:0000203;1.28e-23;25!UBERON:0000073;1.67e-20;53!UBERON:0002616;1.67e-20;53!UBERON:0001017;2.41e-17;75!UBERON:0002619;1.59e-16;22!UBERON:0000955;1.73e-16;68!UBERON:0002037;9.89e-14;6!UBERON:0001016;5.15e-13;83!UBERON:0002680;1.03e-12;9!UBERON:0001895;1.03e-12;9!UBERON:0001950;1.40e-12;20!UBERON:0004733;2.10e-12;12!UBERON:0002028;2.10e-12;12!UBERON:0004732;2.28e-11;13!UBERON:0002107;1.65e-10;19!UBERON:0006925;1.65e-10;19!UBERON:0000125;1.12e-08;9!UBERON:0002308;1.12e-08;9!UBERON:0000369;1.13e-07;4!UBERON:0002435;1.13e-07;4!UBERON:0000204;1.13e-07;4!UBERON:0002423;1.24e-07;25!UBERON:0009663;1.95e-07;7!UBERON:0001954;3.48e-07;2!UBERON:0003022;3.48e-07;2!UBERON:0002421;3.48e-07;2!UBERON:0002600;3.48e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.83e-42,56;UBERON:0005068,3.83e-42,56;UBERON:0006241,3.83e-42,56;UBERON:0007135,3.83e-42,56;UBERON:0000073,1.09e-41,53;UBERON:0002616,1.09e-41,53;UBERON:0001017,2.71e-40,81;UBERON:0000955,3.84e-38,68;UBERON:0006238,3.84e-38,68;UBERON:0001016,1.97e-35,89;UBERON:0003075,8.33e-31,82;UBERON:0007284,8.33e-31,82;UBERON:0003528,1.04e-30,34;UBERON:0002020,1.04e-30,34;UBERON:0001893,1.52e-30,34;UBERON:0002780,2.65e-30,41;UBERON:0001890,2.65e-30,41;UBERON:0003080,2.65e-30,41;UBERON:0006240,2.65e-30,41;UBERON:0002791,1.96e-29,32;UBERON:0001869,1.96e-29,32;UBERON:0002346,5.29e-29,86;UBERON:0000956,1.95e-23,25;UBERON:0000203,1.95e-23,25;UBERON:0003056,7.07e-23,61;UBERON:0010371,1.33e-22,104;UBERON:0011216,4.38e-20,223;UBERON:0010314,2.18e-17,132;UBERON:0004121,9.47e-17,171;UBERON:0000924,9.47e-17,171;UBERON:0006601,9.47e-17,171;UBERON:0002619,2.26e-16,22;UBERON:0000025,1.18e-15,192;UBERON:0007023,5.77e-14,114;UBERON:0002037,7.60e-14,6;UBERON:0006215,7.60e-14,6;UBERON:0002680,8.71e-13,9;UBERON:0001895,8.71e-13,9;UBERON:0010092,8.71e-13,9;UBERON:0003076,1.03e-12,15;UBERON:0003057,1.03e-12,15;UBERON:0004733,1.58e-12,12;UBERON:0002028,1.58e-12,12;UBERON:0007277,1.58e-12,12;UBERON:0001950,2.23e-12,20;UBERON:0004732,1.76e-11,13;UBERON:0004111,1.16e-10,240;UBERON:0002107,1.59e-10,19;UBERON:0006925,1.59e-10,19;UBERON:0008836,1.59e-10,19;UBERON:0008835,6.94e-09,22;UBERON:0003894,6.94e-09,22;UBERON:0000125,1.14e-08,9;UBERON:0002308,1.14e-08,9;UBERON:0009854,1.96e-08,23;UBERON:0000483,1.09e-07,306;UBERON:0000369,1.19e-07,4;UBERON:0002435,1.19e-07,4;UBERON:0000204,1.19e-07,4;UBERON:0010082,1.19e-07,4;UBERON:0007499,1.21e-07,25;UBERON:0009497,1.21e-07,25;UBERON:0000015,1.21e-07,25;UBERON:0002423,1.21e-07,25;UBERON:0006235,1.21e-07,25;UBERON:0004161,1.21e-07,25;UBERON:0000119,1.59e-07,309;UBERON:0009663,1.92e-07,7;UBERON:0001954,2.46e-07,2;UBERON:0003022,2.46e-07,2;UBERON:0002421,2.46e-07,2;UBERON:0002600,2.46e-07,2;UBERON:0009856,2.71e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.188984749602,2.24400760368678,6.26909442956176,9.73202356245593,6.29622355335267,5.27279086298172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3633704291017,0.443458794925128,0.87834785693126,2.03017567021455,0,0,0.97364218096405,0.870648686496336,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.397589304964456,0.348581828608555,0,0.252320850875628,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.8291614912042,4.91413608338813,6.49868897349544,0,0.122988438543114,0,0,0,0,0,0,0,0,3.36198174427723,0,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0,0.468008530278475,0.445893486866185,0,0.335964256397719,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0,0,0,4.8277978602268,0,0,1.50764638800914,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93415789687461,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.979352392114111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.09636686680301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,1.22896305723383,1.11838053946208,0.834245708559542,0.19538809540204,0,0,0,0,0,6.92419999510413,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,6.13612095012929,0,0,0,0,0,0,0,0,5.81599647657131,1.29875337426592,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.723578631752448,1.52581736317083,0.552896299656123,2.65992857058193,1.09692698576986,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28062152663286,0,2.57690890297873,0,0,0,0,2.41981432097328,0,0,0.150323419414493,0,0,0,0,0,1.99226682220855,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,1.70939149080872,0,0.160317640503067,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,2.40168115483916,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,4.3330750268973,4.94495150286999,5.93151185916827,0.492137407573744,0,2.38568906942791,1.77064427945048,0.803765742325096,0.687697182986169,0.83088067605837,0,0,1.45798935979259,0,1.26089131678717,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,13.7759099657397,11.9256200020999,2.19781025814636,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0.628216385000937,0.886068179966986,0.854183854313742,0.500763722825999,1.72022758707021,0.221858103073705,0.869349641179368,0.553394539744923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0,0,0,0,0,0,0,1.28458450192919,1.41696576325585,0.478901577171454,2.05116364240755,0,1.03735878696327,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,0.781078098613847,1.03343398250592,2.02930592620502,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.883606528698812,1.11813715056843,0,0,0,2.04250266890802,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,1.81155412280008,0.308696632431779,1.31135736302374,0,0,0,0.785233868459781,0.297046400327086,2.113278637917,0,0,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0,1.15585533324555,0,0.5290268405154,0,0,0,10.7241461109817,1.74824915141913,0,4.38551967890521,2.6721740526556,2.38926738790597,0,0,0,1.65833887891756,0.413731983447581,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@PIPOX | |||
}} |
Latest revision as of 08:06, 19 September 2015
Short description: | p3@PIPOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PIPOX_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 224bp_to_ENST00000323372, NM_016518, uc002hdr.1_5end |
EntrezGene: | PIPOX |
HGNC: | 17804 |
UniProt: | Q9P0Z9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.09e-23 | 7 |
macroglial cell | 1.09e-23 | 7 |
astrocyte | 1.09e-23 | 7 |
oligodendrocyte precursor cell | 1.09e-23 | 7 |
astrocyte of the cerebral cortex | 3.04e-11 | 3 |
astrocyte of the cerebellum | 4.86e-11 | 3 |
hepatocyte | 7.09e-10 | 12 |
glial cell (sensu Vertebrata) | 4.47e-09 | 15 |
glial cell | 4.47e-09 | 15 |
glioblast | 4.47e-09 | 15 |
glioblast (sensu Vertebrata) | 4.47e-09 | 15 |
neural cell | 1.41e-08 | 25 |
neuron associated cell | 5.31e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.31e-08 | 17 |