FFCP PHASE1:Hg19::chr1:186344945..186345054,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54953 | |EntrezGene=54953 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24299 | |HGNC=24299 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SWX8 | |UniProt=Q5SWX8 | ||
|association_with_transcript=0bp_to_ENST00000287859_5end | |association_with_transcript=0bp_to_ENST00000287859_5end | ||
|cluster_id=chr1:186344945..186345054,+ | |||
|description=CAGE_peak_1_at_C1orf27_5end | |description=CAGE_peak_1_at_C1orf27_5end | ||
|id=chr1:186344945..186345054,+ | |id=chr1:186344945..186345054,+ | ||
|ontology_enrichment_celltype=CL:0000557!1.44e-07!71 | |ontology_enrichment_celltype=CL:0000557!1.44e-07!71 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,7.01e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.00e-09;82 | |||
|ontology_enrichment_disease=DOID:0050687!1.87e-17!143;DOID:305!9.35e-16!106;DOID:162!1.25e-11!235;DOID:14566!3.58e-11!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.87e-17,143;DOID:305,9.35e-16,106;DOID:162,1.25e-11,235;DOID:14566,3.58e-11,239 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.43e-16!57;UBERON:0005068!8.43e-16!57;UBERON:0006241!8.43e-16!57;UBERON:0007135!8.43e-16!57;UBERON:0001017!7.15e-15!82;UBERON:0000062!9.15e-15!511;UBERON:0000073!3.25e-14!94;UBERON:0001016!3.25e-14!94;UBERON:0007023!6.29e-14!115;UBERON:0003080!8.66e-14!42;UBERON:0002780!1.05e-13!41;UBERON:0001890!1.05e-13!41;UBERON:0006240!1.05e-13!41;UBERON:0005743!1.15e-13!86;UBERON:0000955!1.28e-13!69;UBERON:0006238!1.28e-13!69;UBERON:0002616!7.29e-13!59;UBERON:0002346!3.75e-11!90;UBERON:0002020!1.11e-10!34;UBERON:0003528!1.11e-10!34;UBERON:0001893!4.29e-10!34;UBERON:0002791!4.94e-10!33;UBERON:0003075!8.00e-10!86;UBERON:0007284!8.00e-10!86;UBERON:0001869!2.68e-09!32;UBERON:0000924!7.36e-09!173;UBERON:0006601!7.36e-09!173;UBERON:0004121!7.31e-08!169;UBERON:0000033!2.35e-07!123;UBERON:0002619!7.51e-07!22;UBERON:0000153!7.91e-07!129;UBERON:0007811!7.91e-07!129;UBERON:0003056!8.56e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.54e-10;41!UBERON:0001890;4.54e-10;41!UBERON:0000073;2.00e-09;53!UBERON:0002616;2.00e-09;53!UBERON:0003528;3.80e-09;34!UBERON:0002020;3.80e-09;34!UBERON:0002791;7.47e-09;32!UBERON:0001869;2.29e-08;32!UBERON:0001893;2.73e-08;34!UBERON:0001016;4.80e-07;83!UBERON:0002619;9.10e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.07e-15,56;UBERON:0005068,1.07e-15,56;UBERON:0006241,1.07e-15,56;UBERON:0007135,1.07e-15,56;UBERON:0001016,3.10e-15,89;UBERON:0000073,8.44e-15,53;UBERON:0002616,8.44e-15,53;UBERON:0001017,9.62e-15,81;UBERON:0002780,1.05e-13,41;UBERON:0001890,1.05e-13,41;UBERON:0003080,1.05e-13,41;UBERON:0006240,1.05e-13,41;UBERON:0007023,1.57e-13,114;UBERON:0000955,1.71e-13,68;UBERON:0006238,1.71e-13,68;UBERON:0011216,1.09e-12,223;UBERON:0003528,1.11e-10,34;UBERON:0002020,1.11e-10,34;UBERON:0002346,1.89e-10,86;UBERON:0001893,4.29e-10,34;UBERON:0002791,8.54e-10,32;UBERON:0001869,2.68e-09,32;UBERON:0003075,3.83e-09,82;UBERON:0007284,3.83e-09,82;UBERON:0004121,4.09e-08,171;UBERON:0000924,4.09e-08,171;UBERON:0006601,4.09e-08,171;UBERON:0003056,5.39e-07,61;UBERON:0010371,5.97e-07,104;UBERON:0002619,7.51e-07,22 | |||
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| ||
|short_description=p1@C1orf27 | |short_description=p1@C1orf27 | ||
}} | }} |
Latest revision as of 08:03, 19 September 2015
Short description: | p1@C1orf27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1orf27_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000287859_5end |
EntrezGene: | C1orf27 |
HGNC: | 24299 |
UniProt: | Q5SWX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 7.01e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.07e-15 | 56 |
neural rod | 1.07e-15 | 56 |
future spinal cord | 1.07e-15 | 56 |
neural keel | 1.07e-15 | 56 |
nervous system | 3.10e-15 | 89 |
regional part of nervous system | 8.44e-15 | 53 |
regional part of brain | 8.44e-15 | 53 |
central nervous system | 9.62e-15 | 81 |
regional part of forebrain | 1.05e-13 | 41 |
forebrain | 1.05e-13 | 41 |
anterior neural tube | 1.05e-13 | 41 |
future forebrain | 1.05e-13 | 41 |
adult organism | 1.57e-13 | 114 |
brain | 1.71e-13 | 68 |
future brain | 1.71e-13 | 68 |
organ system subdivision | 1.09e-12 | 223 |
brain grey matter | 1.11e-10 | 34 |
gray matter | 1.11e-10 | 34 |
neurectoderm | 1.89e-10 | 86 |
telencephalon | 4.29e-10 | 34 |
regional part of telencephalon | 8.54e-10 | 32 |
cerebral hemisphere | 2.68e-09 | 32 |
neural plate | 3.83e-09 | 82 |
presumptive neural plate | 3.83e-09 | 82 |
ectoderm-derived structure | 4.09e-08 | 171 |
ectoderm | 4.09e-08 | 171 |
presumptive ectoderm | 4.09e-08 | 171 |
pre-chordal neural plate | 5.39e-07 | 61 |
ecto-epithelium | 5.97e-07 | 104 |
regional part of cerebral cortex | 7.51e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.87e-17 | 143 |
carcinoma | 9.35e-16 | 106 |
cancer | 1.25e-11 | 235 |
disease of cellular proliferation | 3.58e-11 | 239 |