FFCP PHASE1:Hg19::chr14:23341077..23341094,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:23341077..23341094,+ to FFCP PHASE1:Hg19::chr14:23341077..23341094,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26020 | |EntrezGene=26020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14553 | |HGNC=14553 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z4F1 | |UniProt=Q7Z4F1 | ||
|association_with_transcript=117bp_to_NM_014045,uc001whd.2_5end | |||
|cluster_id=chr14:23341077..23341094,+ | |||
|coexpression_cluster_id=C3413 | |||
|description=CAGE_peak_4_at_LRP10_5end | |||
|id=chr14:23341077..23341094,+ | |||
|ontology_enrichment_celltype=CL:0000222!7.61e-16!119;CL:0000055!7.90e-14!180;CL:0002371!2.14e-13!591;CL:0000220!4.57e-13!246;CL:0000359!1.74e-12!32;CL:0002321!2.36e-12!248;CL:0000192!4.14e-12!42;CL:0000514!4.14e-12!42;CL:0000144!1.08e-10!625;CL:0000183!3.45e-10!59;CL:0000680!1.28e-09!57;CL:0000056!1.28e-09!57;CL:0000355!1.28e-09!57;CL:0000187!7.18e-09!54;CL:0000548!1.45e-08!679;CL:0000004!1.45e-08!679;CL:0000255!1.45e-08!679;CL:0000057!2.09e-08!75;CL:0002078!6.69e-08!44;CL:1000449!6.87e-08!16;CL:0000012!9.52e-08!682;CL:0000115!2.42e-07!35;CL:1000497!3.99e-07!18;CL:0002518!3.99e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.97e-12;32!CL:0000192;1.77e-09;43!CL:1000449;2.08e-08;15!CL:1000497;1.60e-07;17!CL:0002518;1.60e-07;17!CL:0000115;3.48e-07;36!CL:0002681;6.15e-07;12!CL:0002584;6.15e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.66e-16,121;CL:0002321,1.64e-13,250;CL:0000359,7.98e-13,32;CL:0000192,2.29e-12,43;CL:0000514,2.29e-12,43;CL:0000680,2.65e-09,58;CL:0000056,2.65e-09,58;CL:0000355,2.65e-09,58;CL:0002078,7.01e-09,45;CL:0000187,1.56e-08,55;CL:1000449,1.69e-08,15;CL:0000057,2.51e-08,76;CL:0000115,4.04e-08,36;CL:1000497,1.29e-07,17;CL:0002518,1.29e-07,17;CL:0002681,5.31e-07,12;CL:0002584,5.31e-07,12;CL:0002139,8.39e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;1.77e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;6.39e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.66e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.19e-23!118;UBERON:0000055!4.53e-19!69;UBERON:0001981!1.85e-18!60;UBERON:0007500!1.85e-18!60;UBERON:0004537!1.85e-18!60;UBERON:0006965!1.85e-18!60;UBERON:0001637!3.06e-18!42;UBERON:0003509!3.06e-18!42;UBERON:0004572!3.06e-18!42;UBERON:0002049!3.54e-18!79;UBERON:0007798!3.54e-18!79;UBERON:0004535!6.20e-18!110;UBERON:0001009!2.96e-17!113;UBERON:0004872!3.53e-17!84;UBERON:0000926!6.77e-17!448;UBERON:0004120!6.77e-17!448;UBERON:0006603!6.77e-17!448;UBERON:0002100!2.21e-16!216;UBERON:0005256!2.80e-15!143;UBERON:0004573!1.24e-14!33;UBERON:0004571!1.24e-14!33;UBERON:0000490!1.53e-12!138;UBERON:0003104!7.82e-11!238;UBERON:0009142!7.82e-11!238;UBERON:0009569!1.17e-10!113;UBERON:0000468!1.54e-10!659;UBERON:0000480!2.16e-09!626;UBERON:0000467!2.33e-09!625;UBERON:0000947!4.51e-09!21;UBERON:0010191!4.51e-09!21;UBERON:0000486!5.37e-09!82;UBERON:0003081!6.22e-09!216;UBERON:0004876!1.23e-08!20;UBERON:0000914!1.23e-08!83;UBERON:0002329!1.23e-08!83;UBERON:0003077!1.23e-08!83;UBERON:0003059!1.23e-08!83;UBERON:0007282!1.23e-08!83;UBERON:0009618!1.23e-08!83;UBERON:0007285!1.23e-08!83;UBERON:0000080!1.59e-08!18;UBERON:0002120!1.59e-08!18;UBERON:0004875!1.59e-08!18;UBERON:0005721!1.59e-08!18;UBERON:0005754!1.59e-08!18;UBERON:0007297!1.59e-08!18;UBERON:0006555!3.30e-08!17;UBERON:0005103!3.30e-08!17;UBERON:0000083!3.30e-08!17;UBERON:0009201!3.30e-08!17;UBERON:0004819!3.30e-08!17;UBERON:0006553!3.30e-08!17;UBERON:0003074!3.30e-08!17;UBERON:0003060!3.30e-08!17;UBERON:0002385!4.23e-08!63;UBERON:0001015!4.23e-08!63;UBERON:0000383!4.23e-08!63;UBERON:0004290!5.02e-08!70;UBERON:0001134!5.38e-08!61;UBERON:0002036!5.38e-08!61;UBERON:0003082!5.38e-08!61;UBERON:0000466!5.42e-08!126;UBERON:0004211!6.87e-08!16;UBERON:0001285!6.87e-08!16;UBERON:0007684!6.87e-08!16;UBERON:0003220!6.87e-08!16;UBERON:0004208!6.87e-08!16;UBERON:0000464!1.38e-07!104;UBERON:0002553!1.67e-07!70;UBERON:0000058!1.72e-07!26;UBERON:0002417!1.74e-07!61;UBERON:0000916!1.74e-07!61;UBERON:0004111!1.85e-07!241;UBERON:0003887!1.93e-07!21;UBERON:0000353!2.12e-07!17;UBERON:0003886!2.69e-07!63;UBERON:0003064!5.32e-07!37;UBERON:0003103!5.55e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.01e-14;42!UBERON:0003509;1.01e-14;42!UBERON:0004572;1.01e-14;42!UBERON:0004573;5.14e-14;33!UBERON:0004571;5.14e-14;33!UBERON:0003914;9.64e-12;74!UBERON:0007500;3.88e-11;56!UBERON:0001981;3.88e-11;56!UBERON:0004537;3.88e-11;56!UBERON:0000055;1.04e-09;65!UBERON:0000947;1.56e-09;21!UBERON:0010191;1.56e-09;21!UBERON:0006555;2.08e-08;15!UBERON:0004819;2.08e-08;15!UBERON:0001285;2.08e-08;15!UBERON:0007684;2.08e-08;15!UBERON:0002049;7.76e-08;75!UBERON:0007798;7.76e-08;75!UBERON:0000025;2.17e-07;93!UBERON:0000353;2.75e-07;15!UBERON:0001225;6.15e-07;12!UBERON:0008987;6.15e-07;12 | |||
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| ||
|short_description=p4@LRP10 | |||
}} | }} |
Latest revision as of 07:55, 19 September 2015
Short description: | p4@LRP10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRP10_5end |
Coexpression cluster: | C3413_Neutrophils_Eosinophils_Mesenchymal_Smooth_Fibroblast_Osteoblast_mesenchymal |
Association with transcript: | 117bp_to_NM_014045, uc001whd.2_5end |
EntrezGene: | LRP10 |
HGNC: | 14553 |
UniProt: | Q7Z4F1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.66e-16 | 121 |
embryonic cell | 1.64e-13 | 250 |
vascular associated smooth muscle cell | 7.98e-13 | 32 |
smooth muscle cell | 2.29e-12 | 43 |
smooth muscle myoblast | 2.29e-12 | 43 |
muscle precursor cell | 2.65e-09 | 58 |
myoblast | 2.65e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.65e-09 | 58 |
meso-epithelial cell | 7.01e-09 | 45 |
muscle cell | 1.56e-08 | 55 |
epithelial cell of nephron | 1.69e-08 | 15 |
fibroblast | 2.51e-08 | 76 |
endothelial cell | 4.04e-08 | 36 |
kidney cell | 1.29e-07 | 17 |
kidney epithelial cell | 1.29e-07 | 17 |
kidney cortical cell | 5.31e-07 | 12 |
renal cortical epithelial cell | 5.31e-07 | 12 |
endothelial cell of vascular tree | 8.39e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.66e-07 | 14 |