FFCP PHASE1:Hg19::chr5:94983748..94983760,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=317671 | |EntrezGene=317671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29587 | |HGNC=29587 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000504893_5end | |association_with_transcript=0bp_to_ENST00000504893_5end | ||
|cluster_id=chr5:94983748..94983760,+ | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_2_at_RFESD_5end | |description=CAGE_peak_2_at_RFESD_5end | ||
|id=chr5:94983748..94983760,+ | |id=chr5:94983748..94983760,+ | ||
|ontology_enrichment_celltype=CL:0002274!5.58e-13!5;CL:0000457!5.58e-13!5;CL:0002191!5.58e-13!5;CL:0000097!5.58e-13!5;CL:0000831!5.58e-13!5;CL:0002028!5.58e-13!5;CL:0000163!1.75e-09!9;CL:0000988!6.18e-07!182 | |ontology_enrichment_celltype=CL:0002274!5.58e-13!5;CL:0000457!5.58e-13!5;CL:0002191!5.58e-13!5;CL:0000097!5.58e-13!5;CL:0000831!5.58e-13!5;CL:0002028!5.58e-13!5;CL:0000163!1.75e-09!9;CL:0000988!6.18e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.09e-31;5!CL:0000163;3.44e-17;9!CL:0000764;1.82e-14;2!CL:0000558;1.82e-14;2!CL:0000763;7.25e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.09e-31,5;CL:0002028,4.09e-31,5;CL:0000763,2.88e-19,108;CL:0000049,2.88e-19,108;CL:0000163,3.05e-17,9;CL:0002032,4.30e-16,161;CL:0000837,4.30e-16,161;CL:0000037,3.11e-15,168;CL:0000764,1.82e-14,2;CL:0000765,1.82e-14,2;CL:0000050,1.82e-14,2;CL:0000038,1.82e-14,2;CL:0000558,1.82e-14,2;CL:0000547,1.82e-14,2;CL:0000549,1.82e-14,2;CL:0000550,1.82e-14,2;CL:0000552,1.82e-14,2;CL:0000988,3.14e-14,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.99e-20!8;DOID:1240!2.32e-18!39;DOID:2531!2.42e-14!51;DOID:0060083!2.42e-14!51;DOID:8692!5.73e-13!31 | |ontology_enrichment_disease=DOID:1036!1.99e-20!8;DOID:1240!2.32e-18!39;DOID:2531!2.42e-14!51;DOID:0060083!2.42e-14!51;DOID:8692!5.73e-13!31 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.55e-50;8!DOID:8692;2.48e-31;31!DOID:1240;3.41e-30;39!DOID:2531;1.66e-18;51!DOID:0060083;1.66e-18;51!DOID:8552;1.26e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.55e-50,8;DOID:1240,3.58e-38,39;DOID:8692,3.56e-32,31;DOID:2531,2.01e-28,51;DOID:0060083,2.01e-28,51;DOID:0050686,1.84e-08,137;DOID:8552,1.15e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.95e-14!15;UBERON:0000179!2.95e-14!15;UBERON:0000463!2.95e-14!15;UBERON:0000478!2.08e-07!24;UBERON:0005631!6.13e-07!14;UBERON:0000158!6.13e-07!14 | |ontology_enrichment_uberon=UBERON:0000178!2.95e-14!15;UBERON:0000179!2.95e-14!15;UBERON:0000463!2.95e-14!15;UBERON:0000478!2.08e-07!24;UBERON:0005631!6.13e-07!14;UBERON:0000158!6.13e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.12e-10;15!UBERON:0000179;3.12e-10;15!UBERON:0000463;3.12e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.09e-10,15;UBERON:0000179,3.09e-10,15;UBERON:0000463,3.09e-10,15 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,5.26768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7065295158377,8.89289183533583,1.65862492432618,2.88239906833923,2.5248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,206.981323553762,198.690942778924,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,5.58192370155386,4.58782324285425,0,0.476463550915578,0.411362273086194,2.59389324477087,6.48037724685738,0,0,0,0,0.371606350251437,0,1.28055318027145,0.159426272728822,0,0,1.48171507906718,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,8.63059139075251,6.15436994738562,6.49093628342359,0,8.45922030527097,0,0,0,0,0,0.47748896947538,0.593929361665277,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,4.7896618469388,0,0,0,0,0,0,0,0.1137934482855,0,0.709163045303809,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0.638002319463839,0.274792780205587,0,11.241262801531,1.56980256395025,5.65119718460532,24.8155226678899,25.2920669269884,26.0123459812556,24.4782315214199,10.489814212705,0,0,0.424059214301822,0,0,0,0,0.296521128680622,0.617819694732514,0.417687798021821,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0.279282401272254,0,0,0,0,0.223171457441873,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,5.50019889020571,0,0.79318464064088,0,2.65013777824443,0,0,0,0,0.106787412567695,1.88645166119599,0,0,0.197611631897944,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06265241515447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506794004045748,0,0,0,0,0,0,0,0,0.852935927603924,0,0,0.372448285775147,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p2@RFESD | |short_description=p2@RFESD | ||
}} | }} |
Latest revision as of 07:38, 19 September 2015
Short description: | p2@RFESD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RFESD_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000504893_5end |
EntrezGene: | RFESD |
HGNC: | 29587 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.09e-31 | 5 |
basophil mast progenitor cell | 4.09e-31 | 5 |
myeloid cell | 2.88e-19 | 108 |
common myeloid progenitor | 2.88e-19 | 108 |
endocrine cell | 3.05e-17 | 9 |
hematopoietic oligopotent progenitor cell | 4.30e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.30e-16 | 161 |
hematopoietic stem cell | 3.11e-15 | 168 |
erythroid lineage cell | 1.82e-14 | 2 |
erythroblast | 1.82e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 1.82e-14 | 2 |
erythroid progenitor cell | 1.82e-14 | 2 |
reticulocyte | 1.82e-14 | 2 |
proerythroblast | 1.82e-14 | 2 |
basophilic erythroblast | 1.82e-14 | 2 |
polychromatophilic erythroblast | 1.82e-14 | 2 |
orthochromatic erythroblast | 1.82e-14 | 2 |
hematopoietic cell | 3.14e-14 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 3.09e-10 | 15 |
haemolymphatic fluid | 3.09e-10 | 15 |
organism substance | 3.09e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.55e-50 | 8 |
leukemia | 3.58e-38 | 39 |
myeloid leukemia | 3.56e-32 | 31 |
hematologic cancer | 2.01e-28 | 51 |
immune system cancer | 2.01e-28 | 51 |
organ system cancer | 1.84e-08 | 137 |
chronic myeloid leukemia | 1.15e-07 | 1 |